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(-) Description

Title :  THE ALLOSTERIC TRANSITION OF GLYCOGEN PHOSPHORYLASE
 
Authors :  D. Barford, L. N. Johnson
Date :  17 Dec 90  (Deposition) - 15 Oct 92  (Release) - 13 Jul 11  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.90
Chains :  Asym./Biol. Unit :  A,B,C,D
Keywords :  Glycogen Phosphorylase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Barford, L. N. Johnson
The Allosteric Transition Of Glycogen Phosphorylase.
Nature V. 340 609 1989
PubMed-ID: 2770867  |  Reference-DOI: 10.1038/340609A0
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - GLYCOGEN PHOSPHORYLASE B
    Chains: A, B, C, D
    EC Number: 2.4.1.1
    Engineered: YES
    Organism Common: RABBIT
    Organism Scientific: ORYCTOLAGUS CUNICULUS
    Organism Taxid: 9986

 Structural Features

(-) Chains, Units

  1234
Asymmetric/Biological Unit : ABCD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 16)

Asymmetric/Biological Unit (2, 16)
No.NameCountTypeFull Name
1PLP4Ligand/IonPYRIDOXAL-5'-PHOSPHATE
2SO412Ligand/IonSULFATE ION

(-) Sites  (16, 16)

Asymmetric Unit (16, 16)
No.NameEvidenceResiduesDescription
01AC1SOFTWARELYS A:11 , SER A:14 , ARG B:43BINDING SITE FOR RESIDUE SO4 A 900
02AC2SOFTWAREGLY A:134 , GLY A:135 , ARG A:569 , LYS A:574 , PLP A:999BINDING SITE FOR RESIDUE SO4 A 901
03AC3SOFTWAREARG A:242 , ARG A:310BINDING SITE FOR RESIDUE SO4 A 902
04AC4SOFTWAREARG A:43 , SER B:14 , VAL B:15 , ARG B:69BINDING SITE FOR RESIDUE SO4 B 900
05AC5SOFTWAREGLY B:134 , GLY B:135 , ARG B:569 , LYS B:574BINDING SITE FOR RESIDUE SO4 B 901
06AC6SOFTWAREARG B:242 , ARG B:309 , ARG B:310BINDING SITE FOR RESIDUE SO4 B 902
07AC7SOFTWARESER C:14 , VAL C:15 , ARG C:16 , ARG C:69 , ARG D:43BINDING SITE FOR RESIDUE SO4 C 900
08AC8SOFTWAREARG C:569 , TYR C:573 , LYS C:574BINDING SITE FOR RESIDUE SO4 C 901
09AC9SOFTWARETYR C:155 , ARG C:242 , ARG C:309 , ARG C:310BINDING SITE FOR RESIDUE SO4 C 902
10BC1SOFTWAREARG C:43 , SER D:14 , VAL D:15 , ARG D:69BINDING SITE FOR RESIDUE SO4 D 900
11BC2SOFTWARELYS D:574BINDING SITE FOR RESIDUE SO4 D 901
12BC3SOFTWAREARG D:242 , ARG D:309 , ARG D:310BINDING SITE FOR RESIDUE SO4 D 902
13BC4SOFTWAREARG A:138 , TRP A:491 , LYS A:568 , LYS A:574 , ARG A:649 , VAL A:650 , ALA A:653 , THR A:676 , GLY A:677 , LYS A:680 , SO4 A:901BINDING SITE FOR RESIDUE PLP A 999
14BC5SOFTWAREARG B:138 , TRP B:491 , LYS B:568 , LYS B:574 , TYR B:648 , ARG B:649 , VAL B:650 , ALA B:653 , GLU B:672 , GLY B:675 , THR B:676 , GLY B:677 , LYS B:680BINDING SITE FOR RESIDUE PLP B 999
15BC6SOFTWARETYR C:90 , ARG C:138 , LYS C:568 , TYR C:648 , ARG C:649 , VAL C:650 , GLY C:675 , GLY C:677 , LYS C:680BINDING SITE FOR RESIDUE PLP C 999
16BC7SOFTWARETYR D:90 , ARG D:138 , TRP D:491 , LYS D:568 , TYR D:648 , ARG D:649 , VAL D:650 , ALA D:653 , THR D:676 , GLY D:677 , ASN D:678 , LYS D:680BINDING SITE FOR RESIDUE PLP D 999

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 9GPB)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 9GPB)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 9GPB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 9GPB)

(-) Exons   (0, 0)

(no "Exon" information available for 9GPB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:823
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d9gpba_ A: Glycogen phosphorylase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 9gpbA01 A:10-485,A:813-834 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                                                                                                                                                                   9gpbA02 A:486-812 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                            9gpbA01               --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .............hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeee.hhhhhhhhh.hhhhhhhhhhhh..hhhhhhh....eee..hhhhhhhhhhhhhhhhh..eeeeeeee.ee...eeeee..eeeee............eee....eeeeeeeeeeee..eeeeeeeeeeeeeeeeeeeee....eeeeeeeeeee.............hhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh------....hhhhhhhhhhhh....hhhhhhhhhhhhh----........---hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhheee....---hhhhhhhhh..eeee.hhhhhhhhhhh.hhhhhhhh..eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee....hhhhhhhhhhhhhhhhhhh......eeeeeeeee....hhhhhhhhhhhhhhhhhhh.......eeeeeee...hhhhhhhhh...eeeee..........hhhhhhhhh..eeeee...hhhhhhhhhh....eee..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh............ Sec.struct. author (1)
     Sec.struct. author (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeeeeeee-------------------------------eeeeee--------eeeee-----------------------------------------------eeeee------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 9gpb A  10 RKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAP 837
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279 ||    294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834   
                                                                                                                                                                                                                                                                                                         281|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                          287                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      


Chain B from PDB  Type:PROTEIN  Length:823
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d9gpbb_ B: Glycogen phosphorylase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 9gpbB01 B:10-485,B:813-834 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                                                                                                                                                                   9gpbB02 B:486-812 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                            9gpbB01               --- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .............hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeee.hhhhhhhhh.hhhhhhhhhhhh..hhhhhhh....eee..hhhhhhhhhhhhhhhhh..eeeeeeee.ee...eeeee..eeeee............eee....eeeeeeeeeeee..eeeeeeeeeeeeeeeeeeeee....eeeeeeeeeee.............hhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh------....hhhhhhhhhhhh....hhhhhhhhhhhhh----........---hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhheee....---hhhhhhhhh..eeee.hhhhhhhhhhh.hhhhhhhh..eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee....hhhhhhhhhhhhhhhhhhh......eeeeeeeee....hhhhhhhhhhhhhhhhhhh.......eeeeeee...hhhhhhhhh...eeeee..........hhhhhhhhh..eeeee...hhhhhhhhhh....eee..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh............ Sec.struct. author (1)
     Sec.struct. author (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeeeeeee-------------------------------eeeeee--------eeeee-----------------------------------------------eeeee------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 9gpb B  10 RKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAP 837
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279 ||    294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834   
                                                                                                                                                                                                                                                                                                         281|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                          287                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      


Chain C from PDB  Type:PROTEIN  Length:823
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d9gpbc_ C: Glycogen phosphorylase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 9gpbC01 C:10-485,C:813-835 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                                                                                                                                                                   9gpbC02 C:486-812 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                            9gpbC01                -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .............hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeee.hhhhhhhhh.hhhhhhhhhhhh..hhhhhhh....eee..hhhhhhhhhhhhhhhhh..eeeeeeee.ee...eeeee..eeeee............eee....eeeeeeeeeeee..eeeeeeeeeeeeeeeeeeeee....eeeeeeeeeee.............hhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh------....hhhhhhhhhhhh....hhhhhhhhhhhhh----........---hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhheee....---hhhhhhhhh..eeee.hhhhhhhhhhh.hhhhhhhh..eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee....hhhhhhhhhhhhhhhhhhh......eeeeeeeee....hhhhhhhhhhhhhhhhhhh.......eeeeeee...hhhhhhhhh...eeeee..........hhhhhhhhh..eeeee...hhhhhhhhhh....eee..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh............ Sec.struct. author (1)
     Sec.struct. author (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeeeeeee-------------------------------eeeeee--------eeeee-----------------------------------------------eeeee------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 9gpb C  10 RKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAP 837
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279 ||    294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834   
                                                                                                                                                                                                                                                                                                         281|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                          287                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      


Chain D from PDB  Type:PROTEIN  Length:823
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains d9gpbd_ D: Glycogen phosphorylase                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       SCOP domains
               CATH domains 9gpbD01 D:10-485,D:813-835 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                                                                                                                                                                   9gpbD02 D:486-812 Glycogen Phosphorylase B;                                                                                                                                                                                                                                                                                            9gpbD01                -- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
     Sec.struct. author (1) .............hhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..eeeeee..eeee.hhhhhhhhh.hhhhhhhhhhhh..hhhhhhh....eee..hhhhhhhhhhhhhhhhh..eeeeeeee.ee...eeeee..eeeee............eee....eeeeeeeeeeee..eeeeeeeeeeeeeeeeeeeee....eeeeeeeeeee.............hhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhhhhhhhhh.............hhhhhh------....hhhhhhhhhhhh....hhhhhhhhhhhhh----........---hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhheee....---hhhhhhhhh..eeee.hhhhhhhhhhh.hhhhhhhh..eeeeeee...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhh........eeeeeeeee....hhhhhhhhhhhhhhhhhhh......eeeeeeeee....hhhhhhhhhhhhhhhhhhh.......eeeeeee...hhhhhhhhh...eeeee..........hhhhhhhhh..eeeee...hhhhhhhhhh....eee..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh............ Sec.struct. author (1)
     Sec.struct. author (2) -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------eeeeeeee-------------------------------eeeeee--------eeeee-----------------------------------------------eeeee------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Sec.struct. author (2)
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 9gpb D  10 RKQISVRGLAGVENVTELKKNFNRHLHFTLVKDRNVATPRDYYFALAHTVRDHLVGRWIRTQQHYYEKDPKRIYYLSLEFYMGRTLQNTMVNLALENACDEATYQLGLDMEELEEIEEDAGLGNGGLGRLAACFLDSMATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGAKWVDTQVVLAMPYDTPVPGYRNNVVNTMRLWSAKAPNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPEGKELRLKQEYFVVAATLQDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVIPEALERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPGDVDRLRRMSLVEEGAVKRINMAHLCIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGEEYISDLDQLRKLLSYVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQRLPAP 837
                                    19        29        39        49        59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239       249       259       269       279 ||    294       304       314       324       334       344       354       364       374       384       394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834   
                                                                                                                                                                                                                                                                                                         281|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
                                                                                                                                                                                                                                                                                                          287
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 4)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 8)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)
(-)
Architecture: 3-Layer(aba) Sandwich (12045)
(-)
Topology: Rossmann fold (7312)
(-)
Homologous Superfamily: Glycogen Phosphorylase B; (202)
(-)
Rabbit (Oryctolagus cuniculus) (113)
1a9gpbA02A:486-812
1b9gpbA01A:10-485,A:813-834
1c9gpbB01B:10-485,B:813-834
1d9gpbC01C:10-485,C:813-835
1e9gpbD01D:10-485,D:813-835
1f9gpbB02B:486-812
1g9gpbC02C:486-812
1h9gpbD02D:486-812

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 9GPB)

(-) Gene Ontology  (10, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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  9gpb
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  PYGM_RABIT | P00489
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  2.4.1.1
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  PYGM_RABIT | P00489
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        PYGM_RABIT | P00489: 1a8i 1abb 1axr 1b4d 1bx3 1c50 1c8k 1c8l 1e1y 1fs4 1ftq 1ftw 1fty 1fu4 1fu7 1fu8 1gfz 1gg8 1ggn 1gpa 1gpb 1gpy 1h5u 1hlf 1k06 1k08 1kti 1lwn 1lwo 1noi 1noj 1nok 1p29 1p2b 1p2d 1p2g 1p4g 1p4h 1p4j 1pyg 1uzu 1wut 1wuy 1wv0 1wv1 1ww2 1ww3 1xc7 1xkx 1xl0 1xl1 1z62 1z6p 1z6q 2amv 2f3p 2f3q 2f3s 2f3u 2fet 2ff5 2ffr 2g9q 2g9r 2g9u 2g9v 2gj4 2gm9 2gpa 2gpb 2gpn 2ieg 2iei 2off 2pri 2prj 2pyd 2pyi 2qlm 2qln 2qn1 2qn2 2qn3 2qn7 2qn8 2qn9 2qnb 2qrg 2qrh 2qrm 2qrp 2qrq 2skc 2skd 2ske 3amv 3bcr 3bcs 3bcu 3bd6 3bd7 3bd8 3bda 3cut 3cuu 3cuv 3cuw 3e3l 3e3n 3e3o 3ebo 3ebp 3g2h 3g2i 3g2j 3g2k 3g2l 3g2n 3gpb 3l79 3l7a 3l7b 3l7c 3l7d 3mqf 3mrt 3mrv 3mrx 3ms2 3ms4 3ms7 3msc 3mt7 3mt8 3mt9 3mta 3mtb 3mtd 3nc4 3np7 3np9 3npa 3s0j 3sym 3syr 3t3d 3t3e 3t3g 3t3h 3t3i 3zcp 3zcq 3zcr 3zcs 3zct 3zcu 3zcv 4ctm 4ctn 4cto 4ej2 4eke 4eky 4el0 4el5 4gpb 4mho 4mhs 4mi3 4mi6 4mi9 4mic 4mra 4yi3 4yi5 4yua 4z5x 5gpb 5jtt 5jtu 5lrc 5lrd 5lre 5lrf 6gpb 7gpb 8gpb

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 9GPB)