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(-) Description

Title :  TRIOSE PHOSPHATE ISOMERASE
 
Authors :  P. J. Artymiuk, W. R. Taylor, D. C. Phillips
Date :  25 Aug 98  (Deposition) - 16 Feb 99  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.50
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Isomerase, Glycolysis, Gluconeogenesis, Fatty Acid Biosynthesis (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. J. Artymiuk, W. R. Taylor, D. C. Phillips
Triose Phosphate Isomerase
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TRIOSE PHOSPHATE ISOMERASE
    Cell Line: 293
    Chains: A, B
    EC Number: 5.3.1.1
    Organ: BREAST
    Organism Common: CHICKEN
    Organism Scientific: GALLUS GALLUS
    Organism Taxid: 9031
    Tissue: MUSCLE

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1SO42Ligand/IonSULFATE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER B:211 , GLY B:232 , GLY B:233 , HOH B:621 , HOH B:622BINDING SITE FOR RESIDUE SO4 B 560
2AC2SOFTWAREILE A:170 , SER A:211 , GLY A:233BINDING SITE FOR RESIDUE SO4 A 561

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 8TIM)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 8TIM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 8TIM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 8TIM)

(-) Exons   (0, 0)

(no "Exon" information available for 8TIM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains d8tima_ A: Triosephosphate isomerase                                                                                                                                                                                                                    SCOP domains
               CATH domains 8timA00 A:2-248 Aldolase class I                                                                                                                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee......hhhhhhhhhhhhh......eeeeeee.hhhhhhhhhh.....eeee................hhhhhhh...eeee..hhhhh.....hhhhhhhhhhhhh...eeeeee...hhhhhh..hhhhhhhhhhhhhhh...hhheeeee..hhhh.......hhhhhhhhhhhhhhhhhh..hhhhhh..eee........hhhhhh.....eeee.hhhh.hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8tim A   2 APRKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFVDIINAKH 248
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       


Chain B from PDB  Type:PROTEIN  Length:247
                                                                                                                                                                                                                                                                                       
               SCOP domains d8timb_ B: Triosephosphate isomerase                                                                                                                                                                                                                    SCOP domains
               CATH domains 8timB00 B:2-248 Aldolase class I                                                                                                                                                                                                                        CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee......hhhhhhhhhhhh.......eeeeeee.hhhhhhhhhh.....eeee................hhhhhhh...eeee..hhhhh.....hhhhhhhhhhhhhh..eeeeee...hhhhh...hhhhhhhhhhhhhhh...hhheeeee..hhh........hhhhhhhhhhhhhhhhhh..hhhhhh..eee........hhhhhh.....eeee.hhh..hhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8tim B   2 APRKFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVIACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEVHEKLRGWLKTHVSDAVAQSTRIIYGGSVTGGNCKELASQHDVDGFLVGGASLKPEFVDIINAKH 248
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 8TIM)

(-) Gene Ontology  (17, 17)

Asymmetric/Biological Unit(hide GO term definitions)

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  8tim
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TPIS_CHICK | P00940: 1spq 1sq7 1ssd 1ssg 1su5 1sw0 1sw3 1sw7 1tim 1tpb 1tpc 1tph 1tpu 1tpv 1tpw 4p61

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 8TIM)