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(-) Description

Title :  THEORETICAL MODEL OF CBH1 IN COMPLEX WITH A CELLULOSE NANOMER
 
Authors :  C. Divne, J. Stahlberg, T. A. Jones
Date :  21 Nov 97  (Deposition) - 25 Feb 98  (Release) - 25 Feb 98  (Revision)
Method :  THEORETICAL MODEL
Resolution :  NOT APPLICABLE
Chains :  Theor. Model :  A,_#
( #:   chains that contain no standard or modified protein/DNA/RNA residue)
 
Keywords :  Hydrolase, Cellulose Degradation, Glycosidase, Glycoprotein, Glycosylated Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. Divne, J. Stahlberg, T. T. Teeri, T. A. Jones
High-Resolution Crystal Structures Reveal How A Cellulose Chain Is Bound In The 50 A Long Tunnel Of Cellobiohydrolase I From Trichoderma Reesei.
J. Mol. Biol. V. 275 309 1998
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE I
    Chains: A
    EC Number: 3.2.1.91
    Engineered: YES
    Expression System: TRICHODERMA REESEI
    Expression System Gene: CBH1
    Expression System Plasmid: PEM-F5
    Fragment: CATALYTIC DOMAIN, RESIDUES 1 - 434
    Gene: CBH1
    Organism Common: FUNGUS
    Organism Scientific: TRICHODERMA REESEI
    Strain: QM 9414
    Synonym: EXOGLUCANASE, EXOCELLULASE
    Variant: VTT-D-93201

 Structural Features

(-) Chains, Units

  
Theoretical Model : 
( #:   chains that contain no standard or modified protein/DNA/RNA residue)
 

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 13)

Theoretical Model (4, 13)
No.NameCountTypeFull Name
1CO2Ligand/IonCOBALT (II) ION
2GLC9Ligand/IonGLUCOSE
3NAG1Ligand/IonN-ACETYL-D-GLUCOSAMINE
4PCA1Mod. Amino AcidPYROGLUTAMIC ACID

(-) Sites  (1, 1)

Theoretical Model (1, 1)
No.NameEvidenceResiduesDescription
1CATnot definedGLU A:212 , ASP A:214 , GLU A:217 , HIS A:228ACTIVE SITE.

(-) SS Bonds  (10, 10)

Theoretical Model
No.Residues
1A:4 -A:72
2A:19 -A:25
3A:50 -A:71
4A:61 -A:67
5A:138 -A:397
6A:172 -A:210
7A:176 -A:209
8A:230 -A:256
9A:238 -A:243
10A:261 -A:331

(-) Cis Peptide Bonds  (1, 1)

Theoretical Model
No.Residues
1Tyr A:381 -Pro A:382

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 8CEL)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 8CEL)

(-) Exons   (0, 0)

(no "Exon" information available for 8CEL)

(-) Sequences/Alignments

Theoretical Model
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:434
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeeeeee.....eeeeeeeeee.hhh..eee....................hhhhhhheee....hhhhh.eeee..eeeee.eee...eee.eeeeee.............eeeeeeee.......eeeeeeee.................hhh......................................eeee..eee.eee......eeee.......eeeehhhh.................eee........................eeeeeee.....eeeeeee..eeee...eee..eee....hhhhhhhhhhh...hhhh..hhhhhhhhhh...eeeeeeee......hhhh.........................hhhhhhh....eeeee..eeee......... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 8cel A   1 xSACTLQSETHPPLTWQKCSSGGTCTQQTGSVVIDANWRWTHATNSSTNCYDGNTWSSTLCPDNETCAKNCCLDGAAYASTYGVTTSGNSLSIDFVTQSAQKNVGARLYLMASDTTYQEFTLLGNEFSFDVDVSQLPCGLNGALYFVSMDADGGVSKYPTNTAGAKYGTGYCDSQCPRDLKFINGQANVEGWEPSSNNANTGIGGHGSCCSEMDIWEANSISEALTPHPCTTVGQEICEGDGCGGTYSDNRYGGTCDPDGCDWNPYRLGNTSFYGPGSSFTLDTTKKLTVVTQFETSGAINRYYVQNGVTFQQPNAELGSYSGNELNDDYCTAEEAEFGGSSFSDKGGLTQFKKATSGGMVLVMSLWDDYYANMLWLDSTYPTNETSSTPGAVRGSCSTSSGVPAQVESQSPNAKVTFSNIKFGPIGSTGNPSG 434
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430    
                            |                                                                                                                                                                                                                                                                                                                                                                                                                                                 
                            1-PCA
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 8CEL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 8CEL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 8CEL)

(-) Gene Ontology  (10, 10)

Theoretical Model(hide GO term definitions)

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  Cis Peptide Bonds
    Tyr A:381 - Pro A:382   [ RasMol ]  
 

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  GUX1_HYPJE | P62694
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  3.2.1.91
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GUX1_HYPJE | P62694: 1az6 1azh 1azj 1azk 1cbh 1cel 1dy4 1egn 1q2b 1q2e 2cbh 2cel 2mwj 2mwk 2v3i 2v3r 3cel 4c4c 4c4d 4cel 4d5i 4d5j 4d5o 4d5p 4d5q 4d5v 4p1h 4p1j 4uwt 4v0z 5cel 5x34 5x35 5x36 5x37 5x38 5x39 5x3c 6cel 7cel

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 8CEL)