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Description

Title :   THE CRYSTAL STRUCTURE OF PLASTOCYANIN FROM A GREEN ALGA, ENTEROMORPHA PROLIFERA

Authors :   C. A. Collyer, J. M. Guss, H. C. Freeman

Date :   22 Sep 89 (Deposition) - 15 Jul 90 (Release) - 24 Feb 09 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   1.80

Chains :   Asym. Unit : A
Biol. Unit 1: A  (4x)

Keywords :   Electron Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   C. A. Collyer, J. M. Guss, Y. Sugimura, F. Yoshizaki, H. C. Freeman
Crystal Structure Of Plastocyanin From A Green Alga, Enteromorpha Prolifera.
J. Mol. Biol. V. 211 617 1990
PubMed-ID: 2308169 | Reference-DOI: 10.1016/0022-2836(90)90269-R
(for further references see the PDB file header)

Compounds

Molecule 1 - PLASTOCYANIN
	Chains	:	A
	Engineered	:	YES
	Organism Scientific	:	ULVA PROLIFERA
	Organism Taxid	:	3117

Structural Features

Chains, Units

		1
Asymmetric Unit	:	A
Biological Unit 1 (4x)	:	A

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Count	Type	Full Name
1	CU	1	Ligand/Ion	COPPER (II) ION

Biological Unit 1 (0, 0)

No.	Name	Count	Type	Full Name
1	CU	-1	Ligand/Ion	COPPER (II) ION

Sites (1, 1)

Asymmetric Unit (1, 1)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	PRO A:36 , HIS A:37 , CYS A:84 , HIS A:87 , MET A:92	BINDING SITE FOR RESIDUE CU A 100

SS Bonds (0, 0)

(no "SS Bond" information available for 7PCY)

Cis Peptide Bonds (2, 2)

Asymmetric Unit

No.	Residues
1	Val A:15	-	Pro A:16
2	Phe A:35	-	Pro A:36

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

(no "SAP(SNP)/Variant" information available for 7PCY)

PROSITE Motifs (0, 0)

(no "PROSITE Motif" information available for 7PCY)

Exons (0, 0)

(no "Exon" information available for 7PCY)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
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Chain A from PDB  Type:PROTEIN  Length:98
                                                                                                                                 
               SCOP domains d7pcya_ A: Plastocyanin                                                                            SCOP domains
               CATH domains 7pcyA00 A:0-99 Cupredoxins -  blue copper proteins                                                 CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee..eeeeee.eeeee...eeeeeeee...eeeeeeeeeeee..hhhhhhh........eeeeeeee...eeeeeee.......eeeeeeee Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------- Transcript
                  7pcy A  0 AAIVKLGGDDGSLAFVPNNITVGAGESIEFINNAGFPHNIVFDEDAVPAGVDADAISAEDYLNSKGQTVVRKLTTPGTYGVYCDPHSGAGMKMTITVQ 99
                                     9        19        29        39        49       |61        71        81        91        
                                                                                    57||                                      
                                                                                     59|                                      
                                                                                      61

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	x	→ Chemical Group	(purple background, 'x', labelled with number + name, e.g. ACE or NH2)
	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (1, 1)

Asymmetric Unit

Classes(

)

Folds(

)

Superfamilies( (-)

)

Families(

)

Protein Domains( (-)

)

Organisms( (-)

)

Class: All beta proteins (24004)

Fold: Cupredoxin-like (545)

Superfamily: Cupredoxins (543)

Family: Plastocyanin/azurin-like (241)

Protein domain: Plastocyanin (56)

Green alga (Enteromorpha prolifera) [TaxId: 3117] (1)

d7pcya_

CATH Domains (1, 1)

Asymmetric Unit

Classes(

)

Architectures( (-)

)

Topologies( (-)

)

Homologous Superfamilies( (-)

)

Organisms( (-)

)

Class: Mainly Beta (13760)

Architecture: Sandwich (5577)

Topology: Immunoglobulin-like (3897)

Homologous Superfamily: Cupredoxins - blue copper proteins (420)

Ulva prolifera. Organism_taxid: 3117 (1)

7pcyA00

A:0-99

Pfam Domains (0, 0)

(no "Pfam Domain" information available for 7PCY)

Gene Ontology (9, 9)

Asymmetric Unit(hide GO term definitions)

Visualization

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	Sites
		AC1	[ RasMol ]	+environment [ RasMol ]

	Cis Peptide Bonds
		Phe A:35 - Pro A:36	[ RasMol ]
		Val A:15 - Pro A:16	[ RasMol ]

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Databases

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	7pcy
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Description

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (1, 1)

SS Bonds (0, 0)

Cis Peptide Bonds (2, 2)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

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Exons (0, 0)

Sequences/Alignments

Classification and Annotation

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Gene Ontology (9, 9)

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Related Entries

Entries Sharing at Least One Protein Chain (UniProt ID)

Related Entries Specified in the PDB File