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(-) Description

Title :  STRUCTURE OF PORCINE INSULIN COCRYSTALLIZED WITH CLUPEINE Z
 
Authors :  P. Balschmidt, F. B. Hansen, E. Dodson, G. Dodson, F. Korber
Date :  03 Sep 91  (Deposition) - 31 Jan 94  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G
Biol. Unit 1:  A,B,G  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  A,B,C,D,E,F,G  (2x)
Biol. Unit 5:  A,B,C,D,E,F,G  (1x)
Biol. Unit 6:  C (2x),D (2x),E (2x),F (2x),G (2x)
Biol. Unit 7:  A,B  (2x)
Biol. Unit 8:  B,D,F,G  (2x)
Biol. Unit 9:  C (1x),D (1x),E (1x),F (1x)
Biol. Unit 10:  B,D,F,G  (1x)
Biol. Unit 11:  C,D  (2x)
Biol. Unit 12:  A,B  (1x)
Keywords :  Hormone (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Balschmidt, F. B. Hansen, E. J. Dodson, G. G. Dodson, F. Korber
Structure Of Porcine Insulin Cocrystallized With Clupeine Z.
Acta Crystallogr. , Sect. B V. 47 975 1991
PubMed-ID: 1772633  |  Reference-DOI: 10.1107/S010876819100842X
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - INSULIN (CHAIN A)
    Chains: A, C, E
    Engineered: YES
    Organism Common: PIG
    Organism Scientific: SUS SCROFA
    Organism Taxid: 9823
 
Molecule 2 - INSULIN (CHAIN B)
    Chains: B, D, F
    Engineered: YES
    Organism Common: PIG
    Organism Scientific: SUS SCROFA
    Organism Taxid: 9823
 
Molecule 3 - GENERAL PROTAMINE CHAIN
    Chains: G
    Engineered: YES
    Synthetic: YES

 Structural Features

(-) Chains, Units

  1234567
Asymmetric Unit : ABCDEFG
Biological Unit 1 (1x): AB    G
Biological Unit 2 (1x):   CD   
Biological Unit 3 (1x):     EF 
Biological Unit 4 (2x): ABCDEFG
Biological Unit 5 (1x): ABCDEFG
Biological Unit 6 (2x):   C (2x)D (2x)E (2x)F (2x)G (2x)
Biological Unit 7 (2x): AB     
Biological Unit 8 (2x):  B D FG
Biological Unit 9 (1x):   C (1x)D (1x)E (1x)F (1x) 
Biological Unit 10 (1x):  B D FG
Biological Unit 11 (2x):   CD   
Biological Unit 12 (1x): AB     

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 22)

Asymmetric Unit (3, 22)
No.NameCountTypeFull Name
1CRS3Ligand/IonM-CRESOL
2UNK18Mod. Amino Acid
3ZN1Ligand/IonZINC ION
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CRS1Ligand/IonM-CRESOL
2UNK-1Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 2 (2, 3)
No.NameCountTypeFull Name
1CRS1Ligand/IonM-CRESOL
2UNK2Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1CRS1Ligand/IonM-CRESOL
2UNK-1Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 4 (2, 10)
No.NameCountTypeFull Name
1CRS6Ligand/IonM-CRESOL
2UNK4Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 5 (2, 5)
No.NameCountTypeFull Name
1CRS3Ligand/IonM-CRESOL
2UNK2Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 6 (0, 0)
No.NameCountTypeFull Name
1CRS-1Ligand/IonM-CRESOL
2UNK-1Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 7 (1, 2)
No.NameCountTypeFull Name
1CRS2Ligand/IonM-CRESOL
2UNK-1Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 8 (1, 4)
No.NameCountTypeFull Name
1CRS-1Ligand/IonM-CRESOL
2UNK4Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 9 (2, 3)
No.NameCountTypeFull Name
1CRS1Ligand/IonM-CRESOL
2UNK2Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 10 (1, 2)
No.NameCountTypeFull Name
1CRS-1Ligand/IonM-CRESOL
2UNK2Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 11 (2, 6)
No.NameCountTypeFull Name
1CRS2Ligand/IonM-CRESOL
2UNK4Mod. Amino Acid
3ZN-1Ligand/IonZINC ION
Biological Unit 12 (1, 1)
No.NameCountTypeFull Name
1CRS1Ligand/IonM-CRESOL
2UNK-1Mod. Amino Acid
3ZN-1Ligand/IonZINC ION

(-) Sites  (5, 5)

Asymmetric Unit (5, 5)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIS B:10 , HIS D:10 , HIS F:10 , UNK G:35BINDING SITE FOR RESIDUE ZN D 31
2AC2SOFTWARECYS E:6 , ILE E:10 , CYS E:11 , LEU F:11 , UNK G:39BINDING SITE FOR RESIDUE CRS E 22
3AC3SOFTWARECYS C:6 , ILE C:10 , CYS C:11 , LEU C:16 , LEU D:11 , ALA D:14BINDING SITE FOR RESIDUE CRS C 22
4AC4SOFTWARECYS A:6 , ILE A:10 , CYS A:11 , CYS B:7 , LEU B:11 , ALA B:14 , VAL D:2 , HIS D:5BINDING SITE FOR RESIDUE CRS A 22
5MCRUNKNOWNHIS B:5 , CYS A:6 , CYS A:11 , HIS B:10M-CRESOL BINDING SITE. OH BINDS ON EACH MONOMER TO OA6 AND NHA11 VIA HYDROGEN BOND. IT IS BOUNDED BY B10 OF SAME MONOMER AND B5 OF A DIFFERENT ONE WITHIN THE SAME TRIMER.

(-) SS Bonds  (9, 9)

Asymmetric Unit
No.Residues
1A:6 -A:11
2A:7 -B:7
3A:20 -B:19
4C:6 -C:11
5C:7 -D:7
6C:20 -D:19
7E:6 -E:11
8E:7 -F:7
9E:20 -F:19

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 7INS)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 7INS)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 7INS)

(-) Exons   (0, 0)

(no "Exon" information available for 7INS)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains d7ins.1 B:,A: Insulin SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author hhhhhhhh...hhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  7ins A  1 GIVEQCCTSICSLYQLENYCN 21
                                    10        20 


Chain B from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains d7ins.1 B:,A: Insulin          SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  7ins B  1 FVNQHLCGSHLVEALYLVCGERGFFYTPKA 30
                                    10        20        30


Chain C from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains d7ins.2 D:,C: Insulin SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author hhhhhhh....hhhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  7ins C  1 GIVEQCCTSICSLYQLENYCN 21
                                    10        20 


Chain D from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains d7ins.2 D:,C: Insulin          SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  7ins D  1 FVNQHLCGSHLVEALYLVCGERGFFYTPKA 30
                                    10        20        30


Chain E from PDB  Type:PROTEIN  Length:21
                                                    
               SCOP domains d7ins.3 F:,E: Insulin SCOP domains
               CATH domains --------------------- CATH domains
               Pfam domains --------------------- Pfam domains
         Sec.struct. author hhhhhhh....hhhhhh.... Sec.struct. author
                 SAPs(SNPs) --------------------- SAPs(SNPs)
                    PROSITE --------------------- PROSITE
                 Transcript --------------------- Transcript
                  7ins E  1 GIVEQCCTSICSLYQLENYCN 21
                                    10        20 


Chain F from PDB  Type:PROTEIN  Length:30
                                                             
               SCOP domains d7ins.3 F:,E: Insulin          SCOP domains
               CATH domains ------------------------------ CATH domains
               Pfam domains ------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhh....... Sec.struct. author
                 SAPs(SNPs) ------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------ PROSITE
                 Transcript ------------------------------ Transcript
                  7ins F  1 FVNQHLCGSHLVEALYLVCGERGFFYTPKA 30
                                    10        20        30


Chain G from PDB  Type:PROTEIN  Length:16
                                               
               SCOP domains ---------------- SCOP domains
               CATH domains ---------------- CATH domains
               Pfam domains ---------------- Pfam domains
         Sec.struct. author ................ Sec.struct. author
                 SAPs(SNPs) ---------------- SAPs(SNPs)
                    PROSITE ---------------- PROSITE
                 Transcript ---------------- Transcript
                  7ins G  5 xxxxxxxxxxxxxxxx 43
                            ||||||||27||||||
                            5-UNK|||27-UNK||
                             6-UNK|||29-UNK|
                              8-UNK|| 33-UNK
                              11-UNK|  35-UNK
                               20-UNK   39-UNK
                                21-UNK   41-UNK
                                 22-UNK   43-UNK
                                  23-UNK    
                                   25-UNK
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 3)

Asymmetric Unit
(-)
Class: Small proteins (3458)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 7INS)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 7INS)

(-) Gene Ontology  (26, 26)

Asymmetric Unit(hide GO term definitions)

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  7ins
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        INS_PIG | P01315: 1b17 1b18 1b19 1b2a 1b2b 1b2c 1b2d 1b2e 1b2f 1b2g 1dei 1iza 1izb 1m5a 1mpj 1sdb 1wav 1zei 1zni 2efa 2g4m 2tci 2zpp 3fhp 3gky 3ins 3mth 3rto 3t2a 4a7e 4ins 5d52 5d53 5d54 5d5e 5fb6 5lis 6ins 9ins

(-) Related Entries Specified in the PDB File

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