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(-) Description

Title :  THE ADAPTABILITY OF THE ACTIVE SITE OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE AS OBSERVED IN THE CRYSTAL STRUCTURES OF THREE DIFFERENT COMPLEXES
 
Authors :  M. E. M. Noble, R. K. Wierenga, W. G. J. Hol
Date :  23 Apr 91  (Deposition) - 15 Oct 92  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Isomerase(Intramolecular Oxidoreductase) (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. E. Noble, R. K. Wierenga, A. M. Lambeir, F. R. Opperdoes, A. M. Thunnissen, K. H. Kalk, H. Groendijk, W. G. Hol
The Adaptability Of The Active Site Of Trypanosomal Triosephosphate Isomerase As Observed In The Crystal Structures Of Three Different Complexes.
Proteins V. 10 50 1991
PubMed-ID: 2062828  |  Reference-DOI: 10.1002/PROT.340100106
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - TRIOSEPHOSPHATE ISOMERASE
    Chains: A, B
    EC Number: 5.3.1.1
    Engineered: YES
    Organism Scientific: TRYPANOSOMA BRUCEI BRUCEI
    Organism Taxid: 5702
    Strain: BRUCEI

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1G3P1Ligand/IonSN-GLYCEROL-3-PHOSPHATE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASN B:11 , LYS B:13 , HIS B:95 , GLU B:167 , ILE B:172 , GLY B:173 , SER B:213 , LEU B:232 , GLY B:234 , GLY B:235 , HOH B:601 , HOH B:602 , HOH B:648 , HOH B:692BINDING SITE FOR RESIDUE G3P B 300

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 6TIM)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 6TIM)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 6TIM)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 6TIM)

(-) Exons   (0, 0)

(no "Exon" information available for 6TIM)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:249
                                                                                                                                                                                                                                                                                         
               SCOP domains d6tima_ A: Triosephosphate isomerase                                                                                                                                                                                                                      SCOP domains
               CATH domains 6timA00 A:2-250 Aldolase class I                                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee......hhhhhhhhhhhhh.......eeeeee....hhhhhhh.....eeeee...............hhhhhh....eeee..hhhhhh....hhhhhhhhhhhhh...eeeeee...hhhhh...hhhhhhhhhhhhhh...hhhhhheeeee.............hhhhhhhhhhhhhhhhhh..hhhhhh.eeee.....hhhhhhhh......eeee.hhhh...hhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 6tim A   2 SKPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ 250
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241         


Chain B from PDB  Type:PROTEIN  Length:249
                                                                                                                                                                                                                                                                                         
               SCOP domains d6timb_ B: Triosephosphate isomerase                                                                                                                                                                                                                      SCOP domains
               CATH domains 6timB00 B:2-250 Aldolase class I                                                                                                                                                                                                                          CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee......hhhhhhhhhhhh........eeeee.....hhhhhhh.....eeeee...............hhhhhh....eeee..hhhhhh....hhhhhhhhhhhhh...eeeeee...hhhhh...hhhhhhhhhhhhh....hhhhhheeeee.............hhhhhhhhhhhhhhhhhh..hhhhhh..eee........hhhhhh.....eeee.hhhh...hhhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 6tim B   2 SKPQPIAAANWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAIAKSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRSWVSSKIGADVAGELRILYGGSVNGKNARTLYQQRDVNGFLVGGASLKPEFVDIIKATQ 250
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha and beta proteins (a/b) (23833)

(-) CATH Domains  (1, 2)

Asymmetric/Biological Unit
(-)
Class: Alpha Beta (26913)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 6TIM)

(-) Gene Ontology  (9, 9)

Asymmetric/Biological Unit(hide GO term definitions)

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  6tim
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TPIS_TRYBB | P04789: 1ag1 1dkw 1iig 1iih 1kv5 1ml1 1mss 1mtm 1tpd 1tpe 1tpf 1trd 1tri 1tsi 1tti 1ttj 2j24 2j27 2v0t 2v2c 2v2d 2v2h 2v5l 2vei 2vek 2vel 2vem 2ven 2wsq 2wsr 2x16 2x1r 2x1s 2x1t 2x1u 2x2g 2y6z 2y70 3q37 3tim 4jeq 4pc8 4pcf 4tim 5i3f 5i3g 5i3h 5i3i 5i3j 5i3k 5tim

(-) Related Entries Specified in the PDB File

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