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(-) Description

Title :  CRYSTAL STRUCTURE OF ACETOACETYL-COA REDUCTASE FROM BURKHOLDERIA PSEUDOMALLEI 1710B WITH BOUND NADP
 
Authors :  Seattle Structural Genomics Center For Infectious Disease (S
Date :  27 Apr 17  (Deposition) - 24 May 17  (Release) - 24 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.70
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (4x)
Biol. Unit 3:  A  (2x)
Biol. Unit 4:  A  (2x)
Keywords :  Ssgcid, Structural Genomics, Seattle Structural Genomics Center For Infectious Disease, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. M. Dranow, D. G. Conrady, D. D. Lorimer, T. E. Edwards
Crystal Structure Of Acetoacetyl-Coa Reductase From Burkholderia Pseudomallei 1710B With Bound Nadp
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - ACETOACETYL-COA REDUCTASE
    Chains: A
    EC Number: 1.1.1.36
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: BUPSA.00010.E.A1
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: PHBB-1, BURPS1710B_2329
    Organism Scientific: BURKHOLDERIA PSEUDOMALLEI (STRAIN 1710B)
    Organism Taxid: 320372
    Strain: 1710B

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (4x): A
Biological Unit 3 (2x): A
Biological Unit 4 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1MPD1Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
2NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 1 (2, 2)
No.NameCountTypeFull Name
1MPD1Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
2NAP1Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 2 (2, 8)
No.NameCountTypeFull Name
1MPD4Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
2NAP4Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 3 (2, 4)
No.NameCountTypeFull Name
1MPD2Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
2NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Biological Unit 4 (2, 4)
No.NameCountTypeFull Name
1MPD2Ligand/Ion(4S)-2-METHYL-2,4-PENTANEDIOL
2NAP2Ligand/IonNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREGLY A:12 , GLY A:15 , GLY A:16 , ILE A:17 , CYS A:36 , GLY A:37 , SER A:40 , ARG A:42 , GLY A:62 , ASN A:63 , VAL A:64 , ASN A:90 , ALA A:91 , GLY A:92 , ILE A:93 , THR A:113 , ILE A:140 , SER A:141 , SER A:142 , TYR A:155 , LYS A:159 , PRO A:185 , GLY A:186 , TYR A:187 , ILE A:188 , HOH A:405 , HOH A:410 , HOH A:413 , HOH A:414 , HOH A:419 , HOH A:420 , HOH A:425 , HOH A:443 , HOH A:455 , HOH A:475 , HOH A:483 , HOH A:487 , HOH A:530 , HOH A:593binding site for residue NAP A 301
2AC2SOFTWAREVAL A:44 , LEU A:47 , GLU A:48 , TRP A:67 , MET A:102 , THR A:103 , ARG A:104 , LYS A:123binding site for residue MPD A 302

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5VML)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:245
                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee....hhhhhhhhhhhhhh..eeeeee.....hhhhhhhhhhhh....eeee....hhhhhhhhhhhhhhhh....eeee........hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhh.eeeeee.hhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...eeeeeeee....hhhhhh.hhhhhhhhhhh.......hhhhhhhhhhhhhh.........eeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5vml A   4 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKGQFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVAWLASEESGFSTGADFSLNGGLHMG 248
                                    13        23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243
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 Classification and Annotation

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(-) Gene Ontology  (5, 5)

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 Related Entries

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        Q3JRS9_BURP1 | Q3JRS9: 3ezl

(-) Related Entries Specified in the PDB File

3ezl SAME PROTEIN BUT WITHOUT NADP (APO)