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Title :   INSIGHTS INTO WATSON-CRICK/HOOGSTEEN BREATHING DYNAMICS AND DAMAGE REPAIR FROM THE SOLUTION STRUCTURE AND DYNAMIC ENSEMBLE OF DNA DUPLEXES CONTAINING M1A - A6-DNAM1A16 STRUCTURE

Authors :   B. Sathyamoorthy, H. Shi, Y. Xue, H. M. Al-Hashimi

Date :   26 Feb 17 (Deposition) - 05 Apr 17 (Release) - 31 May 17 (Revision)

Method :   SOLUTION NMR

Resolution :   NOT APPLICABLE

Chains :   NMR Structure  : A,B  (10x)
NMR Structure *: A,B  (1x)

Keywords :   Hoogsteen Base Pairs, Dna Structure And Dynamics, N1-Methyladenine, Damage Recognition And Repair, Nmr Structure And Dynamic Ensembles, Dna (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. Sathyamoorthy, H. Shi, H. Zhou, Y. Xue, A. Rangadurai, D. K. Merriman, H. M. Al-Hashimi
Insights Into Watson-Crick/Hoogsteen Breathing Dynamics And Damage Repair From The Solution Structure And Dynamic Ensemble Of Dna Duplexes Containing M1A.
Nucleic Acids Res. V. 45 5586 2017
PubMed-ID: 28369571 | Reference-DOI: 10.1093/NAR/GKX186

Compounds

*Molecule 1 - DNA (5'-D(CPGPAPTPTPTPTPTPTPGPGPC)-3')*
	Chains	:	A
	Engineered	:	YES
	Organism Scientific	:	SYNTHETIC CONSTRUCT
	Organism Taxid	:	32630
	Synthetic	:	YES

*Molecule 2 - DNA (5'-D(GPCPCP(M1A)PAPAPAPAPAPTPCPG)-3')*
	Chains	:	B
	Engineered	:	YES
	Organism Scientific	:	SYNTHETIC CONSTRUCT
	Organism Taxid	:	32630
	Synthetic	:	YES

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (1, 1)

Sites (0, 0)

SS Bonds (0, 0)

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NMR Structure

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Chain A from PDB  Type:DNA  Length:12
                                           
                  5uzi A  1 CGATTTTTTGGC 12
                                    10

Chain B from PDB  Type:DNA  Length:12
                                           
                  5uzi B 13 GCCxAAAAATCG 24
                               |    22  
                              16-MA7

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SCOP Domains (0, 0)

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