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(-) Description

Title :  CRYSTAL STRUCTURE OF FRIZZLED 7 CRD IN COMPLEX WITH C24 FATTY ACID
 
Authors :  S. Mukund, A. H. Nile, K. Stanger, R. N. Hannoush, W. Wang
Date :  13 Feb 17  (Deposition) - 10 May 17  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.20
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Frizzled 7, Crd, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. H. Nile, S. Mukund, K. Stanger, W. Wang, R. N. Hannoush
Unsaturated Fatty Acyl Recognition By Frizzled Receptors Mediates Dimerization Upon Wnt Ligand Binding.
Proc. Natl. Acad. Sci. V. 114 4147 2017 U. S. A.
PubMed-ID: 28377511  |  Reference-DOI: 10.1073/PNAS.1618293114

(-) Compounds

Molecule 1 - FRIZZLED-7
    Chains: A, B
    Engineered: YES
    Expression System: TRICHOPLUSIA NI
    Expression System Taxid: 7111
    Gene: FZD7
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: HFZ7,FZE3

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 14)

Asymmetric/Biological Unit (4, 14)
No.NameCountTypeFull Name
11PG3Ligand/Ion2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL
2NAG2Ligand/IonN-ACETYL-D-GLUCOSAMINE
3NER1Ligand/Ion(15E)-TETRACOS-15-ENOIC ACID
4SO48Ligand/IonSULFATE ION

(-) Sites  (14, 14)

Asymmetric Unit (14, 14)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREGLU A:52 , GLN A:55 , PHE A:56 , PRO A:58 , MET A:105 , PHE A:110 , SER B:12 , PRO B:14 , PRO B:58 , PHE B:108 , PHE B:110 , HOH B:353binding site for residue NER A 201
02AC2SOFTWARETYR A:57 , LYS A:61 , ARG A:69 , HOH A:346 , HOH A:360binding site for residue SO4 A 203
03AC3SOFTWAREARG A:69 , HOH A:302 , HOH A:307 , HOH A:314 , HOH A:335binding site for residue SO4 A 204
04AC4SOFTWAREPRO A:113 , GLU A:114 , ARG A:115binding site for residue SO4 A 205
05AC5SOFTWAREASN A:106 , GLY A:109 , GLN A:111 , GLY B:17 , CYS B:19 , GLN B:20 , THR B:44binding site for residue 1PG B 202
06AC6SOFTWARECYS A:80 , THR A:81 , VAL A:82 , ILE A:129 , CYS A:130 , HOH A:391 , HOH A:394 , THR B:135binding site for residue 1PG B 203
07AC7SOFTWARELYS A:107 , PRO B:38 , GLN B:85 , LEU B:104 , LYS B:107 , HOH B:343 , HOH B:382binding site for residue 1PG B 204
08AC8SOFTWAREVAL B:13 , TYR B:57 , LYS B:61 , ARG B:69 , HOH B:349binding site for residue SO4 B 205
09AC9SOFTWAREARG B:69 , HOH B:311 , HOH B:325 , HOH B:357binding site for residue SO4 B 206
10AD1SOFTWAREGLY B:17 , PHE B:18 , CYS B:19 , HOH B:371binding site for residue SO4 B 207
11AD2SOFTWAREARG B:117 , HOH B:301binding site for residue SO4 B 208
12AD3SOFTWAREPRO B:113 , GLU B:114 , ARG B:115 , HOH B:303 , HOH B:347binding site for residue SO4 B 209
13AD4SOFTWAREASN A:33binding site for Mono-Saccharide NAG A 202 bound to ASN A 33
14AD5SOFTWAREASN B:33binding site for Mono-Saccharide NAG B 201 bound to ASN B 33

(-) SS Bonds  (10, 10)

Asymmetric/Biological Unit
No.Residues
1A:19 -A:80
2A:27 -A:73
3A:64 -A:101
4A:90 -A:130
5A:94 -A:118
6B:19 -B:80
7B:27 -B:73
8B:64 -B:101
9B:90 -B:130
10B:94 -B:118

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Leu A:37 -Pro A:38
2Leu B:37 -Pro B:38

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5URV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5URV)

(-) Exons   (0, 0)

(no "Exon" information available for 5URV)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:118
                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eee..hhhhh.....eee........hhhhhhhhhh.hhhhhhhh...hhhhhhhhhhh............hhhhhhhhhhhhhhhhhhh....hhhhhhhhh............ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------- Transcript
                 5urv A  16 HGFCQPISIPLCTDIAYNQTILPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLDQAIPPCRSLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVGQ 133
                                    25        35        45        55        65        75        85        95       105       115       125        


Chain B from PDB  Type:PROTEIN  Length:129
                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee..hhhhh.....eee........hhhhhhhhhh.hhhhhhh....hhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhh...hhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5urv B   8 EKGISVPDHGFCQPISIPLCTDIAYNQTILPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAPVCTVLDQAIPPCRSLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVGQNTS 136
                                    17        27        37        47        57        67        77        87        97       107       117       127
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5URV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5URV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5URV)

(-) Gene Ontology  (36, 36)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

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UniProtKB/Swiss-Prot
        FZD7_HUMAN | O75084: 4z33 5t44

(-) Related Entries Specified in the PDB File

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