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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN GLUCOSE 6-PHOSPHATE DEHYDROGENASE MUTANT (A277C) COMPLEXED WITH G6P
 
Authors :  A. T. Ranzani, A. T. Cordeiro
Date :  23 Jan 17  (Deposition) - 19 Apr 17  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.65
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Dehydrogenase, A277C, Tetramer, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. T. Ranzani, A. T. Cordeiro
Mutations In The Tetramer Interface Of Human Glucose-6-Phosphate Dehydrogenase Reveals Kinetic Differences Between Oligomeric States.
Febs Lett. V. 591 1278 2017
PubMed-ID: 28370139  |  Reference-DOI: 10.1002/1873-3468.12638

(-) Compounds

Molecule 1 - GLUCOSE-6-PHOSPHATE 1-DEHYDROGENASE
    Chains: A
    EC Number: 1.1.1.49
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET-SUMO
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Fragment: UNP RESIDUES 59-541
    Gene: G6PD
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: G6PD

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
1BG61Ligand/IonBETA-D-GLUCOSE-6-PHOSPHATE
2GOL1Ligand/IonGLYCEROL
Biological Unit 1 (2, 8)
No.NameCountTypeFull Name
1BG64Ligand/IonBETA-D-GLUCOSE-6-PHOSPHATE
2GOL4Ligand/IonGLYCEROL

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:171 , HIS A:201 , TYR A:202 , LYS A:205 , GLU A:239 , ASP A:258 , HIS A:263 , LYS A:360 , ARG A:365 , GLN A:395binding site for residue BG6 A 601
2AC2SOFTWAREARG A:227 , ASP A:375binding site for residue GOL A 602

(-) SS Bonds  (1, 1)

Asymmetric Unit
No.Residues
1A:277 -A:294

(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Lys A:171 -Pro A:172
2Gln A:395 -Pro A:396

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5UKW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5UKW)

(-) Exons   (0, 0)

(no "Exon" information available for 5UKW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:476
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eeeeee...hhhhhhhhhhhhhhhhhh......eeeeeee....hhhhhhhhhhhhhh.hhhhhhhhhhhhhheeeee....hhhhhhhhhhhhhh.......eeeeee..hhhhhhhhhhhhhhhh......eeeee......hhhhhhhhhhhhhhhhhhh.eee.hhhhhhhhhhhhhhhhhhh...........eeeeeeeee.......hhhhhhh.hhhhhhh.hhhhhhhhhhhh......hhhhhhhhhhhhhhh....hhh.eeeeeee.....hhhhh................eeeeeee.........eeeeeee......eeeeeeee...............eeeeeee...eeeeeeeee.......eeeeeeeee...........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh...eeee.....hhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ukw A  28 FSDTHIFIIMGASGDLAKKKIYPTIWWLFRDGLLPENTFIVGYARSRLTVADIRKQSEPFFKATPEEKLKLEDFFARNSYVAGQYDDAASYQRLNSHMNALHLGSQANRLFYLALPPTVYEAVTKNIHESCMSQIGWNRIIVEKPFGRDLQSSDRLSNHISSLFREDQIYRIDHYLGKEMVQNLMVLRFANRIFGPIWNRDNIACVILTFKEPFGTEGRGGYFDEFGIIRDVMQNHLLQMLCLVAMEKPCSTNSDDVRDEKVKVLKCISEVQANNVVLGQYVGNPDGGEATKGYLDDPTVPRGSTTATFAAVVLYVENERWDGVPFILRCGKALNERKAEVRLQFHDVAGDIFHQQCKRNELVIRVQPNEAVYTKMMTKKPGMFFNPEESELDLTYGNRYKNVKLPDAYERLILDVFCGSQMHFVRSDELREAWRIFTPLLHQIELEKPKPIPYIYGSRGPTEADELMKRVGFQYE 504
                                    37        47        57        67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307      |318       328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498      
                                                                                                                                                                                                                                                                                                                        314|                                                                                                                                                                                            
                                                                                                                                                                                                                                                                                                                         316
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5UKW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5UKW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5UKW)

(-) Gene Ontology  (38, 38)

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 Related Entries

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        G6PD_HUMAN | P11413: 1qki 2bh9 2bhl

(-) Related Entries Specified in the PDB File

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