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(-) Description

Title :  VPS4-VTA1 COMPLEX
 
Authors :  N. Monroe, P. Shen, H. Han, W. I. Sundquist, C. P. Hill
Date :  13 Jan 17  (Deposition) - 12 Apr 17  (Release) - 12 Apr 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  5.70
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S
Keywords :  Vps4, Escrt, Vta1, Aaa Atpase, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  N. Monroe, P. Shen, H. Han, C. Hill, W. Sundquist
Peptide Translocation By Vps4-Vta1 Complex
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 4
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: VPS4, CSC1, DID6, END13, GRD13, VPL4, VPT10, YPR173C, P9705.10
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: DOA4-INDEPENDENT DEGRADATION PROTEIN 6, PROTEIN END13, VACUOLAR PROTEIN-TARGETING PROTEIN 10, VPS4P
 
Molecule 2 - DOA4-INDEPENDENT DEGRADATION PROTEIN 4
    Chains: G
    Engineered: YES
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: ESCRT-III COMPLEX SUBUNIT VPS2, VACUOLAR PROTEIN-SORTING- ASSOCIATED PROTEIN 2, VACUOLAR PROTEIN-TARGETING PROTEIN 14, VPS2P
    Synthetic: YES
 
Molecule 3 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1
    Chains: H, I, J, K, L, M, N, O, P, Q, R, S
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: VTA1, YLR181C
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 4932
    Synonym: VPS20-ASSOCIATED PROTEIN 1, VTA1P

 Structural Features

(-) Chains, Units

  12345678910111213141516171819
Asymmetric/Biological Unit : ABCDEFGHIJKLMNOPQRS

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (5, 20)

Asymmetric/Biological Unit (5, 20)
No.NameCountTypeFull Name
1ACE1Mod. Amino AcidACETYL GROUP
2ADP5Ligand/IonADENOSINE-5'-DIPHOSPHATE
3BEF3Ligand/IonBERYLLIUM TRIFLUORIDE ION
4MG3Ligand/IonMAGNESIUM ION
5UNK8Mod. Amino Acid

(-) Sites  (11, 11)

Asymmetric Unit (11, 11)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREASP A:134 , VAL A:135 , ALA A:136 , GLY A:176 , GLY A:178 , LYS A:179 , SER A:180 , TYR A:181 , MET A:307 , GLY A:336 , SER A:337 , BEF A:502 , MG A:503 , ARG B:288 , ARG B:289binding site for residue ADP A 501
02AC2SOFTWAREPRO A:175 , GLY A:176 , LYS A:179 , ASN A:277 , ADP A:501 , MG A:503 , ARG B:288 , ARG B:289binding site for residue BEF A 502
03AC3SOFTWARESER A:180 , ASP A:232 , ADP A:501 , BEF A:502binding site for residue MG A 503
04AC4SOFTWAREASP B:134 , ALA B:136 , GLY B:176 , GLY B:178 , LYS B:179 , SER B:180 , TYR B:181 , MET B:307 , GLY B:336 , SER B:337 , MG B:502 , ARG C:288 , BEF C:501binding site for residue ADP B 501
05AC5SOFTWARESER B:180 , ASP B:232 , ADP B:501 , BEF C:501binding site for residue MG B 502
06AC6SOFTWAREPRO B:175 , ASN B:277 , ADP B:501 , MG B:502 , ARG C:288 , ARG C:289binding site for residue BEF C 501
07AC7SOFTWAREASP C:134 , GLY C:176 , GLY C:178 , LYS C:179 , SER C:180 , TYR C:181 , MET C:307 , GLY C:336 , SER C:337 , BEF C:503 , MG C:504 , ARG D:288 , ARG D:289binding site for residue ADP C 502
08AC8SOFTWAREPRO C:175 , GLY C:176 , LYS C:179 , ASN C:277 , ADP C:502 , MG C:504 , ARG D:288 , ARG D:289binding site for residue BEF C 503
09AC9SOFTWAREASP C:232 , ADP C:502 , BEF C:503binding site for residue MG C 504
10AD1SOFTWAREASP D:134 , VAL D:135 , ALA D:136 , PRO D:175 , GLY D:176 , GLY D:178 , LYS D:179 , SER D:180 , TYR D:181 , MET D:307 , GLY D:336binding site for residue ADP D 501
11AD2SOFTWAREASP E:134 , VAL E:135 , ALA E:136 , GLY E:176 , THR E:177 , GLY E:178 , LYS E:179 , SER E:180 , TYR E:181 , GLY E:336 , SER E:337binding site for residue ADP E 501

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5UIE)

(-) Cis Peptide Bonds  (6, 6)

Asymmetric/Biological Unit
No.Residues
1Lys A:225 -Pro A:226
2Lys B:225 -Pro B:226
3Lys C:225 -Pro C:226
4Lys D:225 -Pro D:226
5Lys E:225 -Pro E:226
6Lys F:225 -Pro F:226

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5UIE)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5UIE)

(-) Exons   (0, 0)

(no "Exon" information available for 5UIE)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:312
                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............hhhhh..hhhhhhhhhhhhhhhhhh............eeeee.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhhhh..eeeee.hhhhhh..........hhhhhhhhhhhh...........eeee.......hhhhhhhh.eeee....hhhhhhhhhhhhh.......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee......eee.......ee..hhhhh..........hhhhhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5uie A 118 ALSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   127       137       147       157       167       177       187       197       207       217       227       237       247       257       267       277       287       297       307       317       327       337       347       357      |371       381       391       401       411       421       431  
                                                                                                                                                                                                                                                                                364|                                                                
                                                                                                                                                                                                                                                                                 369                                                                


Chain B from PDB  Type:PROTEIN  Length:311
                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhhhhhh............eeeee.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhhhh..eeeee.hhhhh.......hhhhhhhhhhhhhhhhh..........eee........hhhhhhhh.eeee....hhhhhhhhhhhhh.......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee......eee.......ee..hhhhh..........hhhhhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uie B 119 LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358     ||372       382       392       402       412       422       432 
                                                                                                                                                                                                                                                                               364|                                                                
                                                                                                                                                                                                                                                                                369                                                                


Chain C from PDB  Type:PROTEIN  Length:311
                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhh..hhhhhhhhhhhhhhhhhh............eeeee.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhhhh..eeeee.hhhhh.......hhhhhhhhhhhhhhhhh.........eeeeee......hhhhhhhh.eeee....hhhhhhhhhhhhh.......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee......eee.......ee..hhhhh..........hhhhhhhhhhhh.....hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uie C 119 LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358     ||372       382       392       402       412       422       432 
                                                                                                                                                                                                                                                                               364|                                                                
                                                                                                                                                                                                                                                                                369                                                                


Chain D from PDB  Type:PROTEIN  Length:311
                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................hhhhhhhhhhhhhhhhhh............eeeee.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhhhh..eeeee.hhhhh.......hhhhhhhhhhhhhhhhh.........eeee........hhhhhhhh.eeee....hhhhhhhhhhhhh.......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee......eee.......ee..hhhhh..........hhhhhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uie D 119 LSSAILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   128       138       148       158       168       178       188       198       208       218       228       238       248       258       268       278       288       298       308       318       328       338       348       358     ||372       382       392       402       412       422       432 
                                                                                                                                                                                                                                                                               364|                                                                
                                                                                                                                                                                                                                                                                369                                                                


Chain E from PDB  Type:PROTEIN  Length:308
                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ................hhhhhhhhhhhhhhhhhhhhhh........eeeee.....hhhhhhhhhhhh...eeeee..........hhhhhhhhhhhhhhhhh..eeeee.hhhhh.......hhhhhhhhhhhhhhhhh.........eeee........hhhhhhhh.eeee....hhhhhhhhhhhhh.......hhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhh...eee......eee.......ee..hhhhh..........hhhhhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uie E 122 AILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTRGEGESEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361  ||   375       385       395       405       415       425        
                                                                                                                                                                                                                                                                            364|                                                                
                                                                                                                                                                                                                                                                             369                                                                


Chain F from PDB  Type:PROTEIN  Length:302
                                                                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eee....hhhhh..hhhhhhhhhhhhhhhhhhhhhh........eeeee.....hhhhhhhhhhhhhh.eeeeeehhhhhh.hhhhhhhhhhhhhhhhhhh..eeeeee.hhhhh....hhhhhhhhhhhhhhhhhh...eeeeeee.hhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhh......hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhh..eee......eee...........hhhhh..........hhhhhhhhhhhh......hhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5uie F 122 AILSEKPNVKWEDVAGLEGAKEALKEAVILPVKFPHLFKGNRKPTSGILLYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFAMARENKPSIIFIDEVDALTGTEASRRIKTELLVQMNGVGNDSQGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAARTTMFEINVGDTPCVLTKEDYRTLGAMTEGYSGSDIAVVVKDALMQPIRKIQSATHFKDVSETRKLTPCSPGDDGAIEMSWTDIEADELKEPDLTIKDFLKAIKSTRPTVNEDDLLKQEQFTRDFG 433
                                   131       141       151       161       171       181       191       201       211       221       231       247       257       267       277       287       297       307       317       327       337       347       357      |371       381       391       401       411       421       431  
                                                                                                                                                240|                                                                                                                  364|                                                                
                                                                                                                                                 247                                                                                                                   369                                                                


Chain G from PDB  Type:PROTEIN  Length:9
                                         
               SCOP domains --------- SCOP domains
               CATH domains --------- CATH domains
               Pfam domains --------- Pfam domains
         Sec.struct. author ......... Sec.struct. author
                 SAPs(SNPs) --------- SAPs(SNPs)
                    PROSITE --------- PROSITE
                 Transcript --------- Transcript
                 5uie G   0 xxxxxxxxx  65
                            |||||||||
                            0-ACE||||
                             1-UNK|||
                             31-UNK||
                              37-UNK|
                               38-UNK
                                39-UNK
                                 43-UNK
                                  61-UNK
                                   65-UNK


Chain H from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie H 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain I from PDB  Type:PROTEIN  Length:51
                                                                                   
               SCOP domains --------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------- Transcript
                 5uie I 280 TKDELTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   289       299       309       319       329 


Chain J from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie J 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain K from PDB  Type:PROTEIN  Length:47
                                                                               
               SCOP domains ----------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------- PROSITE
                 Transcript ----------------------------------------------- Transcript
                 5uie K 284 LTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   293       303       313       323       


Chain L from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie L 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain M from PDB  Type:PROTEIN  Length:47
                                                                               
               SCOP domains ----------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------- PROSITE
                 Transcript ----------------------------------------------- Transcript
                 5uie M 284 LTKIMDRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   293       303       313       323       


Chain N from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie N 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain O from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie O 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain P from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie P 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain Q from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie Q 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain R from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie R 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328  


Chain S from PDB  Type:PROTEIN  Length:42
                                                                          
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                 5uie S 289 DRASKIEQIQKLAKYAISALNYEDLPTAKDELTKALDLLNSI 330
                                   298       308       318       328
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5UIE)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5UIE)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5UIE)

(-) Gene Ontology  (29, 38)

Asymmetric/Biological Unit(hide GO term definitions)

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Asymmetric/Biological Unit
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        VPS4_YEAST | P52917: 2qp9 2qpa 2rko 2v6x 3eie 3eih 3mhv 4niq 5fvk 5fvl
        VTA1_YEAST | Q06263: 2luh 2rkk 2rkl 3mhv 5h7p

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5UIE)