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(-) Description

Title :  CRYSTAL STRUCTURE OF A CELLULOSE-ACTIVE POLYSACCHARIDE MONOOXYGENASE FROM M. THERMOPHILA (MTPMO3*)
 
Authors :  E. A. Span, M. C. Deller, M. A. Marletta
Date :  05 Jan 17  (Deposition) - 15 Mar 17  (Release) - 03 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym. Unit :  A,B,C,D,E,F
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Biol. Unit 5:  E  (1x)
Biol. Unit 6:  F  (1x)
Keywords :  Copper Proteins, Oxygen, Fungal Proteins, Biocatalysis, Oxidation- Reduction, Hydrolase-Oxidoreductase Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  E. A. Span, D. L. M. Suess, M. C. Deller, R. D. Britt, M. A. Marletta
The Role Of The Secondary Coordination Sphere In A Fungal Polysaccharide Monooxygenase.
Acs Chem. Biol. V. 12 1095 2017
PubMed-ID: 28257189  |  Reference-DOI: 10.1021/ACSCHEMBIO.7B00016

(-) Compounds

Molecule 1 - GLYCOSIDE HYDROLASE FAMILY 61 PROTEIN
    ChainsA, B, C, D, E, F
    EngineeredYES
    Expression SystemNEUROSPORA CRASSA
    Expression System PlasmidPCSR1
    Expression System Taxid5141
    Expression System Vector TypePLASMID
    FragmentUNP RESIDUES 18-255
    GeneMYCTH_92668
    Organism ScientificMYCELIOPHTHORA THERMOPHILA
    Organism Taxid573729
    StrainATCC 42464 / BCRC 31852 / DSM 1799

 Structural Features

(-) Chains, Units

  123456
Asymmetric Unit ABCDEF
Biological Unit 1 (1x)A     
Biological Unit 2 (1x) B    
Biological Unit 3 (1x)  C   
Biological Unit 4 (1x)   D  
Biological Unit 5 (1x)    E 
Biological Unit 6 (1x)     F

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 12)

Asymmetric Unit (2, 12)
No.NameCountTypeFull Name
1CU6Ligand/IonCOPPER (II) ION
2HIC6Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 1 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 2 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 3 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 4 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 5 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE
Biological Unit 6 (1, 1)
No.NameCountTypeFull Name
1CU-1Ligand/IonCOPPER (II) ION
2HIC1Mod. Amino Acid4-METHYL-HISTIDINE

(-) Sites  (6, 6)

Asymmetric Unit (6, 6)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREHIC A:1 , THR A:74 , HIS A:75 , TYR A:169 , HOH A:404binding site for residue CU A 301
2AC2SOFTWAREHIC B:1 , THR B:74 , HIS B:75 , TYR B:169 , HOH B:444binding site for residue CU B 301
3AC3SOFTWAREHIC C:1 , HIS C:75 , TYR C:169binding site for residue CU C 301
4AC4SOFTWAREHIC D:1 , THR D:74 , HIS D:75 , TYR D:169binding site for residue CU D 301
5AC5SOFTWAREHIC E:1 , HIS E:75 , TYR E:169binding site for residue CU E 301
6AC6SOFTWAREHIC F:1 , THR F:74 , HIS F:75 , TYR F:169binding site for residue CU F 301

(-) SS Bonds  (12, 12)

Asymmetric Unit
No.Residues
1A:48 -A:172
2A:87 -A:94
3B:48 -B:172
4B:87 -B:94
5C:48 -C:172
6C:87 -C:94
7D:48 -D:172
8D:87 -D:94
9E:48 -E:172
10E:87 -E:94
11F:48 -F:172
12F:87 -F:94

(-) Cis Peptide Bonds  (13, 13)

Asymmetric Unit
No.Residues
1Thr A:122 -Pro A:123
2Ile A:193 -Pro A:194
3Thr B:122 -Pro B:123
4Ile B:193 -Pro B:194
5Thr C:122 -Pro C:123
6Ile C:193 -Pro C:194
7Thr D:122 -Pro D:123
8Ile D:193 -Pro D:194
9Pro D:194 -Gly D:195
10Thr E:122 -Pro E:123
11Ile E:193 -Pro E:194
12Thr F:122 -Pro F:123
13Ile F:193 -Pro F:194

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5UFV)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5UFV)

(-) Exons   (0, 0)

(no "Exon" information available for 5UFV)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeee..eeee...........................hhhhh..........eee....eeeeeeeee......eeeeeee...hhhhh......eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv A   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            |                                                                                                                                                                                                                                   
                            1-HIC                                                                                                                                                                                                                               

Chain B from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeee...........................hhhhh..........eee....eeeeee.........eeeeeee..............eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv B   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            1-HIC                                                                                                                                                                                                                               

Chain C from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeee..eeee...........................hhhhh..........eee....eeeeeeeee......eeeeeee...hhhhh......eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv C   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            1-HIC                                                                                                                                                                                                                               

Chain D from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeee...........................hhhhh..........eee....eeeeee.........eeeeeee...hhhhh......eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv D   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            1-HIC                                                                                                                                                                                                                               

Chain E from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eeeeeeee..eeee...........................hhhhh..........eee....eeeeeeeee......eeeeeee...hhhhh......eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv E   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            1-HIC                                                                                                                                                                                                                               

Chain F from PDB  Type:PROTEIN  Length:228
                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeeeee..eeee...........................hhhhh..........eee....eeeeee.........eeeeeee...hhhhh......eeeeeee..................hhhhhhh...eeeeee.......eeeeeeeeeee.......eeeeeeeeeee........hhh.ee..................................... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5ufv F   1 hGAVTSYNIAGKDYPGYSGFAPTGQDVIQWQWPDYNPVLSASDPKLRCNGGTGAALYAEAAPGDTITATWAQWTHSQGPILVWMYKCPGDFSSCDGSGAGWFKIDEAGFHGDGTTVFLDTETPSGWDIAKLVGGNKSWSSKIPDGLAPGNYLVRHELIALHQANNPQFYPECAQIKVTGSGTAEPAASYKAAIPGYCQQSDPNISFNINDHSLPQEYKIPGPPVFKGT 228
                            |       10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220        
                            1-HIC                                                                                                                                                                                                                               

   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5UFV)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5UFV)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5UFV)

(-) Gene Ontology  (1, 1)

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