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(-) Description

Title :  STRUCTURE OF EUKARYOTIC CMG HELICASE AT A REPLICATION FORK AND IMPLICATIONS
 
Authors :  B. Li, R. Georgescu, Z. Yuan, R. Santos, J. Sun, D. Zhang, O. Yurieva, H. L M. E. O'Donnell
Date :  15 Dec 16  (Deposition) - 08 Feb 17  (Release) - 15 Feb 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  4.90
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,2,3,4,5,6,7
Keywords :  Cmg Helicase, Replisome, Origin Initiation, Dna Polymerase, Dna Replication, Replication (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  R. Georgescu, Z. Yuan, L. Bai, R. De Luna Almeida Santos, J. Sun, D. Zhang, O. Yurieva, H. Li, M. E. O'Donnell
Structure Of Eukaryotic Cmg Helicase At A Replication Fork And Implications To Replisome Architecture And Origin Initiation.
Proc. Natl. Acad. Sci. V. 114 E697 2017 U. S. A.
PubMed-ID: 28096349  |  Reference-DOI: 10.1073/PNAS.1620500114

(-) Compounds

Molecule 1 - DNA REPLICATION LICENSING FACTOR MCM2
    Chains2
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM2, YBL023C, YBL0438
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymMINICHROMOSOME MAINTENANCE PROTEIN 2
 
Molecule 2 - DNA REPLICATION LICENSING FACTOR MCM3
    Chains3
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM3, YEL032W, SYGP-ORF23
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymMINICHROMOSOME MAINTENANCE PROTEIN 3
 
Molecule 3 - DNA REPLICATION LICENSING FACTOR MCM4
    Chains4
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM4, CDC54, HCD21, YPR019W, YP9531.13
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymCELL DIVISION CONTROL PROTEIN 54
 
Molecule 4 - MINICHROMOSOME MAINTENANCE PROTEIN 5
    Chains5
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM5, CDC46, YLR274W, L9328.1
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymCELL DIVISION CONTROL PROTEIN 46
 
Molecule 5 - DNA REPLICATION LICENSING FACTOR MCM6
    Chains6
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM6, YGL201C
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymMINICHROMOSOME MAINTENANCE PROTEIN 6
 
Molecule 6 - DNA REPLICATION LICENSING FACTOR MCM7
    Chains7
    EC Number3.6.4.12
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneMCM7, CDC47, YBR202W, YBR1441
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymCELL DIVISION CONTROL PROTEIN 47,MINICHROMOSOME MAINTENANCE PROTEIN 7
 
Molecule 7 - DNA REPLICATION COMPLEX GINS PROTEIN PSF1
    ChainsA
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GenePSF1, YDR013W, PZA208, YD8119.18
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymPARTNER OF SLD FIVE 1
 
Molecule 8 - DNA REPLICATION COMPLEX GINS PROTEIN PSF2
    ChainsB
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GenePSF2, YJL072C, HRF213, J1086
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymPARTNER OF SLD FIVE 2
 
Molecule 9 - DNA REPLICATION COMPLEX GINS PROTEIN PSF3
    ChainsC
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GenePSF3, YOL146W
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
    SynonymPARTNER OF SLD FIVE 3
 
Molecule 10 - DNA REPLICATION COMPLEX GINS PROTEIN SLD5
    ChainsD
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneSLD5, YDR489W
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
 
Molecule 11 - CELL DIVISION CONTROL PROTEIN 45
    ChainsE
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    GeneCDC45, SLD4, YLR103C, L8004.11
    Organism CommonBAKER'S YEAST
    Organism ScientificSACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid559292
    StrainATCC 204508 / S288C
 
Molecule 12 - DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3')
    ChainsF
    EngineeredYES
    Expression SystemSACCHAROMYCES CEREVISIAE
    Expression System Taxid4932
    Organism ScientificSACCHAROMYCES CEREVISIAE
    Organism Taxid4932

 Structural Features

(-) Chains, Units

  123456789101112
Asymmetric/Biological Unit ABCDEF234567

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1ANP3Ligand/IonPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREILE 2:505 , TYR 2:506 , GLY 2:507 , GLY 2:546 , THR 2:547 , ALA 2:548 , LYS 2:549 , SER 2:550 , GLN 2:551 , GLU 2:608 , LEU 2:695 , VAL 6:650 , HIS 6:653 , PRO 6:704 , ARG 6:708 , VAL 6:797 , ARG 6:798binding site for residue ANP 2 901
2AC2SOFTWAREILE 3:371 , TYR 3:372 , PRO 3:411 , SER 3:412 , THR 3:413 , ALA 3:414 , LYS 3:415 , SER 3:416 , GLN 3:417 , GLU 3:474 , ASN 3:517 , LEU 5:406 , ARG 5:549 , ILE 5:650 , ARG 5:651binding site for residue ANP 3 1001
3AC3SOFTWAREILE 2:533 , HIS 2:621 , GLU 2:625 , ARG 2:676 , VAL 2:807 , ARG 2:808 , GLU 2:811 , ILE 5:378 , PHE 5:379 , GLY 5:419 , THR 5:420 , ALA 5:421 , LYS 5:422 , SER 5:423 , GLN 5:424 , ASN 5:524binding site for residue ANP 5 801

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
15:186 -5:211
27:474 -7:522

(-) Cis Peptide Bonds  (181, 181)

Asymmetric/Biological Unit
No.Residues
1Leu 2:234 -Gly 2:235
2Pro 2:301 -Thr 2:302
3Cys 2:341 -Leu 2:342
4Gln 2:353 -Asp 2:354
5Ile 2:359 -Arg 2:360
6Asn 2:433 -Tyr 2:434
7Asp 2:435 -Gly 2:436
8Gly 2:436 -Asn 2:437
9Pro 2:524 -Lys 2:525
10Asn 2:528 -Gly 2:529
11Gly 2:570 -Ala 2:571
12Ala 2:573 -Val 2:574
13Arg 2:684 -Asp 2:685
14Ser 2:802 -Phe 2:803
15Phe 2:803 -Pro 2:804
16Thr 3:34 -Phe 3:35
17Asp 3:137 -Asp 3:138
18Gly 3:159 -Ser 3:160
19Phe 3:161 -Gly 3:162
20Thr 3:187 -Lys 3:188
21Ala 3:204 -Lys 3:205
22Pro 3:228 -Ala 3:229
23Thr 3:236 -Glu 3:237
24Asn 3:310 -Ser 3:311
25Gly 3:323 -Asn 3:324
26Arg 3:339 -Gln 3:340
27Arg 3:435 -Gly 3:436
28Thr 3:447 -Thr 3:448
29Arg 3:450 -Glu 3:451
30Ala 3:500 -Gly 3:501
31Pro 3:536 -Asp 3:537
32Arg 3:666 -Val 3:667
33Ser 3:695 -Pro 3:696
34Phe 4:201 -Lys 4:202
35Lys 4:202 -Tyr 4:203
36Lys 4:204 -Phe 4:205
37Tyr 4:225 -Tyr 4:226
38Leu 4:249 -Ala 4:250
39Lys 4:252 -Gln 4:253
40Asp 4:292 -Leu 4:293
41Val 4:351 -Cys 4:352
42Cys 4:352 -Asp 4:353
43Arg 4:370 -Cys 4:371
44Arg 4:373 -Ile 4:374
45Asp 4:375 -Cys 4:376
46Cys 4:376 -Asn 4:377
47Asp 4:408 -Gly 4:409
48Asn 4:447 -Ser 4:448
49Lys 4:467 -Lys 4:468
50Gly 4:679 -Ser 4:680
51Glu 4:714 -Lys 4:715
52Leu 4:727 -Tyr 4:728
53Leu 4:729 -Glu 4:730
54Asp 5:41 -Ser 5:42
55Asn 5:130 -Ser 5:131
56Asn 5:196 -Phe 5:197
57Asn 5:235 -Cys 5:236
58Gly 5:237 -Pro 5:238
59Leu 5:264 -Val 5:265
60Val 5:321 -Ala 5:322
61Leu 5:331 -Gly 5:332
62Val 5:337 -Glu 5:338
63Glu 5:338 -Thr 5:339
64Ile 5:342 -Trp 5:343
65Asn 5:344 -Ser 5:345
66Thr 5:347 -Met 5:348
67Pro 5:401 -Asp 5:402
68Gly 5:408 -Asp 5:409
69Gly 5:441 -Lys 5:442
70Ser 5:444 -Ser 5:445
71Thr 5:577 -Gly 5:578
72Val 6:100 -Lys 6:101
73Val 6:103 -Asp 6:104
74Phe 6:122 -Ser 6:123
75Gly 6:130 -Glu 6:131
76Glu 6:133 -Lys 6:134
77Lys 6:134 -Val 6:135
78Thr 6:310 -Cys 6:311
79Cys 6:311 -Asp 6:312
80Met 6:313 -Cys 6:314
81Lys 6:326 -Tyr 6:327
82Thr 6:328 -Glu 6:329
83Pro 6:334 -Asn 6:335
84Asn 6:335 -Pro 6:336
85Pro 6:336 -Ser 6:337
86Asn 6:340 -Arg 6:341
87Trp 6:344 -Thr 6:345
88Asp 6:355 -Trp 6:356
89Thr 6:370 -Gly 6:371
90Ser 6:558 -Thr 6:559
91Glu 6:561 -Gly 6:562
92Arg 6:566 -Gly 6:567
93Ser 6:603 -Ser 6:604
94Ala 6:606 -Gly 6:607
95Ala 6:611 -Val 6:612
96Arg 6:614 -Asp 6:615
97Glu 6:616 -Glu 6:617
98Ala 6:625 -Gly 6:626
99Tyr 6:689 -Asn 6:690
100Asp 6:710 -Leu 6:711
101Arg 6:738 -Asp 6:739
102Gln 6:786 -Gly 6:787
103Ser 6:792 -Tyr 6:793
104Arg 6:794 -Ile 6:795
105Leu 7:94 -Gln 7:95
106Gly 7:96 -Thr 7:97
107Pro 7:128 -Thr 7:129
108Lys 7:135 -Asp 7:136
109Ser 7:208 -Gln 7:209
110Arg 7:214 -Tyr 7:215
111Ser 7:221 -Ser 7:222
112Asn 7:292 -Gln 7:293
113Gln 7:293 -Thr 7:294
114Pro 7:359 -Tyr 7:360
115Gly 7:362 -Phe 7:363
116Lys 7:367 -Ala 7:368
117Gly 7:369 -Leu 7:370
118Gly 7:439 -Val 7:440
119Asp 7:446 -Gly 7:447
120Arg 7:451 -Gly 7:452
121Asp 7:461 -Pro 7:462
122Lys 7:486 -Gly 7:487
123Asp 7:504 -Glu 7:505
124Tyr 7:571 -Gly 7:572
125Val 7:619 -His 7:620
126Leu 7:628 -Asp 7:629
127Gly 7:682 -Gln 7:683
128Arg A:22 -Ser A:23
129Ser A:23 -Asn A:24
130Asn A:105 -Gly A:106
131Gly A:106 -Leu A:107
132Asp A:108 -Leu A:109
133Met A:110 -Ser A:111
134Asp A:145 -Leu A:146
135Val A:147 -Asp A:148
136Ile A:149 -Asp A:150
137Asp A:160 -Val A:161
138Ala A:171 -Gly A:172
139Gly A:172 -Glu A:173
140His B:6 -Leu B:7
141Leu B:7 -Gln B:8
142Trp B:50 -Gln B:51
143Gln B:51 -Leu B:52
144Ala B:59 -Leu B:60
145Glu B:165 -Ser B:166
146Gly C:35 -Arg C:36
147Asn C:101 -Ser C:102
148Thr C:162 -Ser C:163
149Asn D:166 -Ser D:167
150Thr D:212 -Glu D:213
151Gly D:214 -Ser D:215
152Ser D:215 -Val D:216
153Val D:216 -Asn D:217
154Met D:218 -Ile D:219
155Asp D:220 -Glu D:221
156Gly D:252 -Lys D:253
157Tyr D:256 -Thr D:257
158Val D:258 -Thr D:259
159Val D:267 -Glu D:268
160His E:22 -Ser E:23
161Ser E:24 -Cys E:25
162Cys E:25 -Gln E:26
163Ser E:32 -Cys E:33
164Glu E:97 -Ile E:98
165Ile E:98 -Asp E:99
166Arg E:127 -Pro E:128
167Ile E:140 -Gln E:141
168Asp E:145 -Gly E:146
169Asp E:149 -Asp E:150
170Asp E:150 -Thr E:151
171Thr E:151 -Leu E:152
172Leu E:163 -Glu E:164
173Ala E:285 -Gln E:286
174Asn E:308 -Ser E:309
175Val E:310 -Lys E:311
176Lys E:311 -Thr E:312
177Thr E:315 -Leu E:316
178Glu E:558 -Ser E:559
179Ser E:559 -Glu E:560
180Asp E:561 -Lys E:562
181Leu E:646 -Ser E:647

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5U8T)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5U8T)

(-) Exons   (0, 0)

(no "Exon" information available for 5U8T)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain 2 from PDB  Type:PROTEIN  Length:583
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh........hhhhhhhhhhhhh.......hhhhhhhhh...hhhhh.hhhhhhhhhhhhhhhhhhhhh..........................hhhhh.....eeeeeeee...eee..............................eeeeeeeee.............eeeeeee.hhh.......eeee..eee......hhhhh.......eee...eee.....hhhhhhhhhhhhh..hhhhhhhhhh......hhhhhhhhhhhhh.................eeeee.....hhhhhhhhhhhhh..eee.............eeee......eeee.hhhhhh...eeee.hhhhh......hhhhhhhhh.......ee........eeeeee...........hhhhh...hhhhhh...eee......hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t 2 201 PNVSRTIARELKSFLLEYTDETGRSVYGARIRTLGEMNSESLEVNYRHLAESKAILALFLAKCPEEMLKIFDLVAMEATELHYPDYARIHSEIHVRISDFPTIYSLRELRESNLSSLVRVTGVVTRRTGVFPQLKYVKFNCLLGPFFQDSNEEIRVNGEKTVYRNYQRVTLQEAPGTVPPGRLPRHREVILLADLVDVSKPGEEVEVTGIYKNNYDGNLNAKNGFPVFATIIEANSIKRRVFSWTEEEEREFRKISRDRGIIDKIISSMAPSIYGHRDIKTAVACSLFGGVPKNVNGKHSIRGDINVLLLGDPGTAKSQILKYVEKTAHRAVFATGQGASAVGLTASVRKDPITKEWTLEGGALVLADKGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTTLQARCSIIAAANPNGGRYNSTLPLAQNVSLTEPILSRFDILCVVRDLVDEEADERLATFVVDSHVRSSPIPQELLMKYIHYARTKIYPKLHQMDMDKVSRVYADLRRESISTGSFPITVRHLESILRIAESFAKMRLSEFVSSYDLDRAIKVVVDSFVDAQKVSVRRQLRRSFAIY 864
                                   210       220       230       240       250       260       270       280       290       300       310       320       330       340 ||    355    || 379       389       399       409       419       429       439       449       459|      482       492       502       512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702   ||  761       771       781       791       801       811       821       831       841       851       861   
                                                                                                                                                                       342|         360|                                                                                 459|                                                                                                                                                                                                                                      706|                                                                                                            
                                                                                                                                                                        348          375                                                                                  473                                                                                                                                                                                                                                       756                                                                                                            

Chain 3 from PDB  Type:PROTEIN  Length:589
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh................................eeeeeeee......ee...eeeee.......eeee............................ee........eeeeeeee..............eeeeee.hhh.......eeeeeeeee....................eee....ee.......hhhhhhhhhhhh..hhhhhhhhh.......hhhhhhhhhhhhhh................eeeeee....hhhhhhhhhhhh.....eee..........................hhhhhh...eeeee.......hhhhhhhhhhh..eee........eee...eeeeee....................hhhhhh..eeeee....hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t 3  18 DAVFGDRVRRFQEFLDTFTSYRDSVRSIQVYNSNNAANYILPHRIIISLDDLREFDRSFWSGILVEPAYFIPPAEKALTDLADSMDDVPHPWKLSFKGSFGAHALSPRTLTAQHLNKLVSVEGIVTKTSLVRPKLIRSVHYAAKTGRFHYRDYTDATTTLTTRIPTPAIYPTEDTEGNKLTTEYGYSTFIDHQRITVQEMPEMAPAGQLPRSIDVILDDDLVDKTKPGDRVNVVGVFKSLGAGGMNQSNSNTLIGFKTLILGNTVYPLHRQMLTDFDIRNINKLSKKKDIFDILSQSLAPSIYGHDHIKKAILLMLMGGVEKNLENGSHLRGDINILMVGDPSTAKSQLLRFVLNTASLAIATTGRGSSGVGLTAAVTTDRETGERRLEAGAMVLADRGVVCIDEFDKMTDVDRVAIHEVMEQQTVTIAKAGIHTTLNARCSVIAAANPVFGQYDVNRDPHQNIALPDSLLSRFDLLFVVTDDINEIRDRSISEHVLRTHRVTIPFLRKYVQYAKERVIPQLTQEAINVIVKNYTDLRNDDNTKKSPITARTLETLIRLATAHAKVRLSKTVNKVDAKVAANLLRFALL 738
                                    27        37        47        91       101       111       121       131       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       339       349       359       369       379       389       399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569||     659       669       679       689       699       709       719       729         
                                                                 56|                                              140|                                                                                                                                                                                330|                                                                                                                                                                                                                                    570|                                                                                       
                                                                  91                                               151                                                                                                                                                                                 339                                                                                                                                                                                                                                     651                                                                                       

Chain 4 from PDB  Type:PROTEIN  Length:672
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ............hhhhhh............hhhhhhhhhhhh..................hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhh................................eeee...eeee.eeeee........eee.......................ee......eeee..eeee.............eeee..hhhhh..............eeee...............eeee................hhhhhhhhhh.hhhhhhhhhhh.....hhhhhhhhhhhhh.................eeeee.....hhhhhhhhhhhhh......................hhhhh......hhhhhhh..eeeee...........hhhhhh...eeee......eeee...eeeee............hhhhhh..hhhhhh....eee.....hhhhhhhhhhhhh..........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhh...eehhhhhhhh.........hhhhhhhhhhhhhh...ee......eee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5u8t 4 177 LRIIWGTNVSIQECTTNFRNFLMSFKYKFYYIKQLNEMRELGTSNLNLDARNLLAYKQTEDLYHQLLNYPQEVISIMDQTIKDCMVSLIVDNNLDYDLDEIETKFYKVRPYNVGSCKGMRELNPNDIDKLINLKGLVLRSTPVIPDMKVAFFKCNVCDHTMAVEIDRGVIQEPARCERIDCNEPNSMSLIHNRCSFADKQVIKLQETPDFVPDGQTPHSISLCVYDELVDSCRAGDRIEVTGTFRSIPIRANSRQRVLKSLYKTYVDVVHVKKVSRQITDQDLAKIREVAAREDLYSLLARSIAPSIYELEDVKKGILLQLFGGTNKTFTKGGRYRGDINILLCGDPSTSKSQILQYVHKITPRGVYTSGKGSSAVGLTAYITRDVDTKQLVLESGALVLSDGGVCCIDEFDKMSDSTRSVLHEVMEQQTISIAKAGIITTLNARSSILASANPIGSRYNPNLPVTENIDLPPPLLSRFDLVYLVLDKVDEKNDRELAKHLTNLYLEDVLPVEFLTMYISYAKEHIHPIITEAAKTELVRAYVGMRKATTRQLESMIRLAEAHAKMKLKNVVELEDVQEAVRLIRSAIKDYATQTGKSVIQRKLQEDLSREIMNVLKDQASDSMSFNELIKQINEHSQDRVESSDIQEALSRLQQEDKVIVLGEGVRRSVRL 929
                                   186       196       225       235       245       255       265       275       285       295       305       315       325       335       345       355       365       375       385       395       405       415       425       435       445       455       465    || 503       513       523       533       543       553       563       573       583       593       603       613       623       633       643       653       663       673       683       693       703       713       723      |742       752       762       772      |795       805       815       825       835  ||   857       867       877       887       897       907       917       927  
                                                      205|                                                                                                                                                                                                                                                  470|                                                                                                                                                                                                                                    730|                                    779|                                          838|                                                                              
                                                       225                                                                                                                                                                                                                                                   499                                                                                                                                                                                                                                     740                                     793                                           851                                                                              

Chain 5 from PDB  Type:PROTEIN  Length:602
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.....hhhhhhhhhhhh....eeeeehhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh............eeeee........................eeee....eeeeeeeeee......eeeee.....................eeeeeeeeee...eee.............eeeee.hhhhh........eee..eeeee.......eeeee...eee...............hhhhhhhhhhhhh.hhhhhhhhhhh.....hhhhhhhhhhhhh.................eee.......hhhhhhhhhhhhh..eeee......ee......ee......ee...hhhhhh...eeee......hhhhhhhhhhhh...eee........eee...eeee.....hhhhhh...........hhhhhhh............hhhhhhhhhhhhhhh.hhhhhh.hhhhhhh...hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t 5  21 DDDNTEIIKSFKNFILEFRLDSQFIYRDQLRNNILVKNYSLTVNMEHLIGYNEDIYKKLSDEPSDIIPLFETAITQVAKRISILSRNSLPTFQLILNSNANQIPLRDLDSEHVSKIVRLSGIIISTSVLSSRATYLSIMCRNCRHTTSITINNFTVSLPRSCNCGPDPYIIIHESSKFIDQQFLKLQEIPELVPVGEMPRNLTMTCDRYLTNKVIPGTRVTIVGIYSIYNSKVAIRTPYIKILGIQSDVETSSIWNSVTMFTEEEEEEFLQLSRNPKLYEILTNSIAPSIFGNEDIKKAIVCLLMGGSKKILPDGMRLRGDINVLLLGDPGTAKSQLLKFVEKVSPIAVYTSGKGSSAAGLTASVQRDPMTREFYLEGGAMVLADGGVVCIDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTVLNSRTSVLAAANPIYGRYDDLKSPGDNIDFQTTILSRFDMIFIVKDDHNEERDISIANHVINIHTGNANAMQNQQEENGSEISIEKMKRYITYCRLKCAPRLSPQAAEKLSSNFVTIRKQLLINELESTERPITIRQLEAIIRITESLAKLELSPIAQERHVDEAIRLFQASTMDAAS 693
                                    30        40        50        60        70        80        90       100     ||133       143       153       163       173       183       193   ||  209 ||    242       252       262       272       282       292       302 ||    328       338       348       358       368       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558       568       578       588       598       608       618       628       638    || 651       661       671       681       691  
                                                                                                               106|                                                                197|    211|                                                                  304|                                                                                                                                                                                                                                                                                                                               643|                                              
                                                                                                                130                                                                 204     235                                                                   321                                                                                                                                                                                                                                                                                                                                647                                              

Chain 6 from PDB  Type:PROTEIN  Length:661
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhhhhh.............hhhhhhhh..........eehhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........ee...........hhhhh........eeeee............................................................eeeee...............eee...............ee.....eee.........eee.ee...ee.....hhhhhhhhhhh.hhhhhhhhh........hhhhhhhhhhhh............................hhhhhhhhhh............................................eeeee.hhhh........hhhhhh.ee..........ee...eeeee............hhhhhh..hhhhhh............hhhhhhhh.hhhhhhhh..........hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.........hhhhhhhhhhhhhhh..hhhhhh.hhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t 6  97 LNHVKKVDDVTGEKVREAFEQFLEDFSVQSTDTGEVEKVYRAQIEFMKIYDLNTIYIDYQHLSMRENGALAMAISEQYYRFLPFLQKGLRRVVRKYAPERVFQISFFNLPTVHRIRDIRSEKIGSLLSISGTVTRTSEVRPELYKASFTCDMCRAIVDNVEQSFKYTEPTFCPNPSCENRAFWTLNVTRSRFLDWQKVRIQENANEIPTGSMPRTLDVILRGDSVERAKPGDRCKFTGVEIVVPDKPSSTLLTYKISFLACHVISIGSDEINELKEMVKDEHIYDKLVRSIAPAVFGHEAVKKGILLQMLGGVHKSTVEGIKLRGDINICVVGDPSTSKSQFLKYVVGFAPRSVYTSGKASSAAGLTAAVVRDEEGGDYTIEAGALMLADNGICCIDEFDKMDISDQVAIHEAMEQQTISIAKAGIHATLNARTSILAAANPVGGRYNRKLSLRGNLNMTAPIMSRFDLFFVILDDCNEKIDTELASHIVDLHMKRDEAIEPPFSAEQLRRYIKYARTFKPILTKEARSYLVEKYKELRKDDAQGFSRSSYRITVRQLESMIRLSEAIARANCVDEITPSFIAEAYDLLRQSIIRVDVDKYVSMMNMIVRKIAEVDREGAEELTAVDIVDWYLLQKENDLGSLAEYWEERRLAFKVIKRLV 969
                                   106       116       126       136       146       156       166       176       186       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401    || 420||     456      |512       522       532       542       552       562       572       582       592       602       612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832       908       918       928       938       948       958       968 
                                                                                                                           194|                                                                                                                                               406|  421|            463|                                                                                                                                                                                                                                                                                                                                       840|                                                              
                                                                                                                            260                                                                                                                                                416   448             510                                                                                                                                                                                                                                                                                                                                        907                                                              

Chain 7 from PDB  Type:PROTEIN  Length:660
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .........hhhhhhhhhhhhh.......hhhhhhhhhhhh.....eeeehhhhhhhhhhh.........hhhhhhh..hhhhh....hhhhhh.............hhhhhhhhhhhhhhhhhhhh.............eeee..........hhhhh..........hhhhh.eeeeeeeeee.....ee.....eeee.....eee...........................eee........ee...eee................ee.hhhhh........eeeeeee....................ee..eeee....hhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh..................ee......hhhhhhhhhhhhh...ee.....................................eeee.........hhhhhhhhh....................eeee...............................ee........hhhhhhhhhhhhhhhh...........hhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5u8t 7   4 ALPSIQLPVDYNNLFNEITDFLVTFKQDGPKYMAMLQKVANRELNSVIIDLDDILQYQNEKFLQGTQADDLVSAIQQNANHFTELFCRAIDNNMPLPTKEIDYKDDVLDVILNQRRLRNERMLSDRTNELFPPNLTRRYFLYFKPLSQNCARRYRKKAISSKPLSVRQIKGDFLGQLITVRGIITRVSDVKPAVEVIAYTCDQCGYEVFQEVNSRTFTPLSECTSEECSQNQTKGQLFMSTRASKFSAFQECKIQELSQQVPVGHIPRSLNIHVNGTLVRSLSPGDIVDVTGIFLPAPYTGFKALKAGLLTETYLEAQFVRQHKKSDVEERVMELITSGDVYNRLAKSIAPEIYGNLDVKKALLLLLVGGVDKRVGDGMKIRGDINVCLMGDPGVAKSQLLKAICKISPRGVYTTGKGSSGVGLTAAVMKDPVTDEMILEGGALVLADNGICCIDEFDKMDESDRTAIHEVMEQQTISISKAGINTTLNARTSILAAANPLYGRYNPRLSPLDNINLPAALLSRFDILFLMLDIPSRDDDEKLAEHVTYVHMHNKQPDLDFTPVEPSKMREYIAYAKTKRPVMSEAVNDYVVQAYIRLRQDSKREMDSKFSFGQATPRTLLGIIRLSQALAKLRLADMVDIDDVEEALRLVRVSKESLYQ 729
                                    13        23       |61        71        81        91       101       111       121       131       141       151       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381    || 399       409       419       429       439       449       459       469       479       489       499       509       519       529       539       549       559       569       579       589       599       609       619       629       639       649       659       669       679       689       699       709       719       729
                                                      31|                                                                                                159|                                                                                                                                                                                                 386|                                                                                                                                                                                                                                                                                                                                              
                                                       60                                                                                                 190                                                                                                                                                                                                  395                                                                                                                                                                                                                                                                                                                                              

Chain A from PDB  Type:PROTEIN  Length:208
                                                                                                                                                                                                                                                
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhhhhh................ee...........................eehhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t A   1 MYGDLGNKLVLEAKRTKQLYARSNQDVNLPMYHEDIIRNILKEVSNLRKNTEYLKEQQQLGMLDDKVAKCQYFVTLLCMERNKRCLLAYQRLRTDILDSMAWNNNGLDLMSSITFSQQDTNNLSHQEQEYLKEYCDLITDLKSGDLVDIDLSGSLVPPSDVFIDVRVLKDAGEIQTEYGVFNLIKDSQFFVRQSDVERLIQQGYLQKI 208
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200        

Chain B from PDB  Type:PROTEIN  Length:181
                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhh..eeee........................eeeehhhhhhhhhh...........hhhhhhhhhhhhhh..........hhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh.............hhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t B   3 LPAHLQQTFSPEEIQFIVENEPIKIFPRITWQLITTDDKALNNMVAMRSTEVVLWIALLLKQQSKCSIVAPQWLTTKELDRKIQYEKTHPDRFSELPWNWLVLARILFNKAKDDFHDPIHELRGKIQDLREIRQIKVLKGLKYLNESHLQLDNLSLLEINELRPFITEIMDKLREIHTASL 200
                                    12        22        32|       59        69        79        89        99       109       119       129       139       149       159       169       179       189       199 
                                                        32|                                                                                                                                                      
                                                         50                                                                                                                                                      

Chain C from PDB  Type:PROTEIN  Length:159
                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhh..eeeee....................eeeeehhhhhhhh................hhhhhhhhhhh....hhhhhh.....hhhhhhhhh..hhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t C   3 YYDIDDVLADGTEFPCKFQYDIPGLGYNPGRPITKNTKLSLPLWLARILAIVGPVPFVELLPPDMFSTKVMNAIKTDPVALDLHSINSHFFSLAIKWIMLFSEKELANVVSELLLQRAQELNHHASSTSTFLLKLEEMEKEIYKKSHESYKDTKRWMFK 193
                                    12        22      ||35        45        55  ||    74        84        94       104       114       124       134      |164       174       184         
                                                     29|                       58|                                                                      141|                               
                                                      33                        68                                                                       162                               

Chain D from PDB  Type:PROTEIN  Length:221
                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhhhhhhhhhhhhhhhhhhh...hhhhhh..................ee..ee...................................eehhhhhhhhhh..ee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t D  54 VSPQQDFSDLMKSWKNERCSPELLPYPHQLMKRLLNRISMQSQLIENISMGFLDMQNESKLPLLCMETELERLKFVIRSYIRCRLSKIDKFSLYLRQLNEDENSLISLTDLLSKDEIKYHDTHSLIWLKLVNDSILKYMPEELQAINDTEGSVNMIDEPDWNKFVFIHVNGPPDGENEFGKPCYTVTIPDLKEEVELTIGSIYVMRYEVIRDLLRDDKVAL 293
                                    63        73        83        93       103      |123       133       143       153       163       173       183       193       203       213       223       233    || 252       262       272       282       292 
                                                                                  110|                                                                                                                  238|                                             
                                                                                   121                                                                                                                   248                                             

Chain E from PDB  Type:PROTEIN  Length:553
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhh..........eee....hhhhhhhhhhhhhhhhh.....eee..hhhhhhhhhhhh.....eeeee......hhhhhh...........eeeee......hhhhhh...................hhhhhh.........hhhhhhhhhhhhhhhhhhh.........hhhhhhhhhhhhh...hhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhh................ee............hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhh...hhhhhhh.....hhhhhhhhhhhhhhhhhhh.........eeeeee..eeeehhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhh.........................hhhhhhhhhhhhhhhhh.........eeeee........eeeee..............hhhhhhhhhhh..............ee..hhhhhhhhhhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5u8t E   5 ISQFSEAYNKILRNSSSHSSCQLVIFVSCLNIDALCATKMLSLLFKKQLVQSQIVPIFGYSELRRHYSQLDDNINSLLLVGFGGVIDLEAFLEIDPQEQSFRRDIYVLDAHRPWNLDNIFGSQIIQCFDDGTVDDTLGEQKEAYYKLLELNDLSKRKQRKKQIHEYEGVLEEYYSQGTTVVNSISAQIYSLLSAIGETNLSNLWLNILGTTSLDIAYAQVYNRLYPLLQDEVKRLTPSSRNSVKTPDTLTLNIQPDYYLFLLRHSSLYDSFYYSNYVNAKLSLWNENGKKRLHKMFARMGIPLSTAQETWLYMDHSIKRELGIIFDKNLDRYGLQDIIRDGFVRTLGYRGSISASEFVEALTALLEVGNSAQKLTNLRKRWVSNFWLSWDALDDRKVELLNRGIQLAQDLQRAIFNTGVAILEKKLIKHLRIYRLCVLQDGPDLDLYRNPLTLLRLGNWLIECCAESEDKQLLPMVLASIDENTDTYLVAGLTPRYPRGTKKPILNNFSMAFQQITAETDAKVRIDNFESSIIEIRREDLSPFLEKLTLSGLL 650
                                    14        24        34        44        54        64        74        84        94       115       125       135       145       155       165|      227       237       247       257       267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       462       472       482       492       502       512       522       532       542       552       562       572       582       597       607       617       627       637       647   
                                                                                                                           102|                                                165|                                                                                                                                                                                                                       436|                                                                                                                              591|                                                     
                                                                                                                            114                                                 218                                                                                                                                                                                                                        462                                                                                                                               597                                                     

Chain F from PDB  Type:DNA  Length:14
                                              
                 5u8t F   1 TTTTTTTTTTTTTT  14
                                    10    

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5U8T)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5U8T)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5U8T)

(-) Gene Ontology  (53, 248)

Asymmetric/Biological Unit(hide GO term definitions)

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Asymmetric/Biological Unit
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  Cis Peptide Bonds
    Ala 2:573 - Val 2:574   [ RasMol ]  
    Ala 3:204 - Lys 3:205   [ RasMol ]  
    Ala 3:500 - Gly 3:501   [ RasMol ]  
    Ala 6:606 - Gly 6:607   [ RasMol ]  
    Ala 6:611 - Val 6:612   [ RasMol ]  
    Ala 6:625 - Gly 6:626   [ RasMol ]  
    Ala A:171 - Gly A:172   [ RasMol ]  
    Ala B:59 - Leu B:60   [ RasMol ]  
    Ala E:285 - Gln E:286   [ RasMol ]  
    Arg 2:684 - Asp 2:685   [ RasMol ]  
    Arg 3:339 - Gln 3:340   [ RasMol ]  
    Arg 3:435 - Gly 3:436   [ RasMol ]  
    Arg 3:450 - Glu 3:451   [ RasMol ]  
    Arg 3:666 - Val 3:667   [ RasMol ]  
    Arg 4:370 - Cys 4:371   [ RasMol ]  
    Arg 4:373 - Ile 4:374   [ RasMol ]  
    Arg 6:566 - Gly 6:567   [ RasMol ]  
    Arg 6:614 - Asp 6:615   [ RasMol ]  
    Arg 6:738 - Asp 6:739   [ RasMol ]  
    Arg 6:794 - Ile 6:795   [ RasMol ]  
    Arg 7:214 - Tyr 7:215   [ RasMol ]  
    Arg 7:451 - Gly 7:452   [ RasMol ]  
    Arg A:22 - Ser A:23   [ RasMol ]  
    Arg E:127 - Pro E:128   [ RasMol ]  
    Asn 2:433 - Tyr 2:434   [ RasMol ]  
    Asn 2:528 - Gly 2:529   [ RasMol ]  
    Asn 3:310 - Ser 3:311   [ RasMol ]  
    Asn 4:447 - Ser 4:448   [ RasMol ]  
    Asn 5:130 - Ser 5:131   [ RasMol ]  
    Asn 5:196 - Phe 5:197   [ RasMol ]  
    Asn 5:235 - Cys 5:236   [ RasMol ]  
    Asn 5:344 - Ser 5:345   [ RasMol ]  
    Asn 6:335 - Pro 6:336   [ RasMol ]  
    Asn 6:340 - Arg 6:341   [ RasMol ]  
    Asn 7:292 - Gln 7:293   [ RasMol ]  
    Asn A:105 - Gly A:106   [ RasMol ]  
    Asn C:101 - Ser C:102   [ RasMol ]  
    Asn D:166 - Ser D:167   [ RasMol ]  
    Asn E:308 - Ser E:309   [ RasMol ]  
    Asp 2:435 - Gly 2:436   [ RasMol ]  
    Asp 3:137 - Asp 3:138   [ RasMol ]  
    Asp 4:292 - Leu 4:293   [ RasMol ]  
    Asp 4:375 - Cys 4:376   [ RasMol ]  
    Asp 4:408 - Gly 4:409   [ RasMol ]  
    Asp 5:41 - Ser 5:42   [ RasMol ]  
    Asp 6:355 - Trp 6:356   [ RasMol ]  
    Asp 6:710 - Leu 6:711   [ RasMol ]  
    Asp 7:446 - Gly 7:447   [ RasMol ]  
    Asp 7:461 - Pro 7:462   [ RasMol ]  
    Asp 7:504 - Glu 7:505   [ RasMol ]  
    Asp A:108 - Leu A:109   [ RasMol ]  
    Asp A:145 - Leu A:146   [ RasMol ]  
    Asp A:160 - Val A:161   [ RasMol ]  
    Asp D:220 - Glu D:221   [ RasMol ]  
    Asp E:145 - Gly E:146   [ RasMol ]  
    Asp E:149 - Asp E:150   [ RasMol ]  
    Asp E:150 - Thr E:151   [ RasMol ]  
    Asp E:561 - Lys E:562   [ RasMol ]  
    Cys 2:341 - Leu 2:342   [ RasMol ]  
    Cys 4:352 - Asp 4:353   [ RasMol ]  
    Cys 4:376 - Asn 4:377   [ RasMol ]  
    Cys 6:311 - Asp 6:312   [ RasMol ]  
    Cys E:25 - Gln E:26   [ RasMol ]  
    Gln 2:353 - Asp 2:354   [ RasMol ]  
    Gln 6:786 - Gly 6:787   [ RasMol ]  
    Gln 7:293 - Thr 7:294   [ RasMol ]  
    Gln B:51 - Leu B:52   [ RasMol ]  
    Glu 4:714 - Lys 4:715   [ RasMol ]  
    Glu 5:338 - Thr 5:339   [ RasMol ]  
    Glu 6:133 - Lys 6:134   [ RasMol ]  
    Glu 6:561 - Gly 6:562   [ RasMol ]  
    Glu 6:616 - Glu 6:617   [ RasMol ]  
    Glu B:165 - Ser B:166   [ RasMol ]  
    Glu E:558 - Ser E:559   [ RasMol ]  
    Glu E:97 - Ile E:98   [ RasMol ]  
    Gly 2:436 - Asn 2:437   [ RasMol ]  
    Gly 2:570 - Ala 2:571   [ RasMol ]  
    Gly 3:159 - Ser 3:160   [ RasMol ]  
    Gly 3:323 - Asn 3:324   [ RasMol ]  
    Gly 4:679 - Ser 4:680   [ RasMol ]  
    Gly 5:237 - Pro 5:238   [ RasMol ]  
    Gly 5:408 - Asp 5:409   [ RasMol ]  
    Gly 5:441 - Lys 5:442   [ RasMol ]  
    Gly 6:130 - Glu 6:131   [ RasMol ]  
    Gly 7:362 - Phe 7:363   [ RasMol ]  
    Gly 7:369 - Leu 7:370   [ RasMol ]  
    Gly 7:439 - Val 7:440   [ RasMol ]  
    Gly 7:682 - Gln 7:683   [ RasMol ]  
    Gly 7:96 - Thr 7:97   [ RasMol ]  
    Gly A:106 - Leu A:107   [ RasMol ]  
    Gly A:172 - Glu A:173   [ RasMol ]  
    Gly C:35 - Arg C:36   [ RasMol ]  
    Gly D:214 - Ser D:215   [ RasMol ]  
    Gly D:252 - Lys D:253   [ RasMol ]  
    His B:6 - Leu B:7   [ RasMol ]  
    His E:22 - Ser E:23   [ RasMol ]  
    Ile 2:359 - Arg 2:360   [ RasMol ]  
    Ile 5:342 - Trp 5:343   [ RasMol ]  
    Ile A:149 - Asp A:150   [ RasMol ]  
    Ile E:140 - Gln E:141   [ RasMol ]  
    Ile E:98 - Asp E:99   [ RasMol ]  
    Leu 2:234 - Gly 2:235   [ RasMol ]  
    Leu 4:249 - Ala 4:250   [ RasMol ]  
    Leu 4:727 - Tyr 4:728   [ RasMol ]  
    Leu 4:729 - Glu 4:730   [ RasMol ]  
    Leu 5:264 - Val 5:265   [ RasMol ]  
    Leu 5:331 - Gly 5:332   [ RasMol ]  
    Leu 7:628 - Asp 7:629   [ RasMol ]  
    Leu 7:94 - Gln 7:95   [ RasMol ]  
    Leu B:7 - Gln B:8   [ RasMol ]  
    Leu E:163 - Glu E:164   [ RasMol ]  
    Leu E:646 - Ser E:647   [ RasMol ]  
    Lys 4:202 - Tyr 4:203   [ RasMol ]  
    Lys 4:204 - Phe 4:205   [ RasMol ]  
    Lys 4:252 - Gln 4:253   [ RasMol ]  
    Lys 4:467 - Lys 4:468   [ RasMol ]  
    Lys 6:134 - Val 6:135   [ RasMol ]  
    Lys 6:326 - Tyr 6:327   [ RasMol ]  
    Lys 7:135 - Asp 7:136   [ RasMol ]  
    Lys 7:367 - Ala 7:368   [ RasMol ]  
    Lys 7:486 - Gly 7:487   [ RasMol ]  
    Lys E:311 - Thr E:312   [ RasMol ]  
    Met 6:313 - Cys 6:314   [ RasMol ]  
    Met A:110 - Ser A:111   [ RasMol ]  
    Met D:218 - Ile D:219   [ RasMol ]  
    Phe 2:803 - Pro 2:804   [ RasMol ]  
    Phe 3:161 - Gly 3:162   [ RasMol ]  
    Phe 4:201 - Lys 4:202   [ RasMol ]  
    Phe 6:122 - Ser 6:123   [ RasMol ]  
    Pro 2:301 - Thr 2:302   [ RasMol ]  
    Pro 2:524 - Lys 2:525   [ RasMol ]  
    Pro 3:228 - Ala 3:229   [ RasMol ]  
    Pro 3:536 - Asp 3:537   [ RasMol ]  
    Pro 5:401 - Asp 5:402   [ RasMol ]  
    Pro 6:334 - Asn 6:335   [ RasMol ]  
    Pro 6:336 - Ser 6:337   [ RasMol ]  
    Pro 7:128 - Thr 7:129   [ RasMol ]  
    Pro 7:359 - Tyr 7:360   [ RasMol ]  
    Ser 2:802 - Phe 2:803   [ RasMol ]  
    Ser 3:695 - Pro 3:696   [ RasMol ]  
    Ser 5:444 - Ser 5:445   [ RasMol ]  
    Ser 6:558 - Thr 6:559   [ RasMol ]  
    Ser 6:603 - Ser 6:604   [ RasMol ]  
    Ser 6:792 - Tyr 6:793   [ RasMol ]  
    Ser 7:208 - Gln 7:209   [ RasMol ]  
    Ser 7:221 - Ser 7:222   [ RasMol ]  
    Ser A:23 - Asn A:24   [ RasMol ]  
    Ser D:215 - Val D:216   [ RasMol ]  
    Ser E:24 - Cys E:25   [ RasMol ]  
    Ser E:32 - Cys E:33   [ RasMol ]  
    Ser E:559 - Glu E:560   [ RasMol ]  
    Thr 3:187 - Lys 3:188   [ RasMol ]  
    Thr 3:236 - Glu 3:237   [ RasMol ]  
    Thr 3:34 - Phe 3:35   [ RasMol ]  
    Thr 3:447 - Thr 3:448   [ RasMol ]  
    Thr 5:347 - Met 5:348   [ RasMol ]  
    Thr 5:577 - Gly 5:578   [ RasMol ]  
    Thr 6:310 - Cys 6:311   [ RasMol ]  
    Thr 6:328 - Glu 6:329   [ RasMol ]  
    Thr 6:370 - Gly 6:371   [ RasMol ]  
    Thr C:162 - Ser C:163   [ RasMol ]  
    Thr D:212 - Glu D:213   [ RasMol ]  
    Thr E:151 - Leu E:152   [ RasMol ]  
    Thr E:315 - Leu E:316   [ RasMol ]  
    Trp 6:344 - Thr 6:345   [ RasMol ]  
    Trp B:50 - Gln B:51   [ RasMol ]  
    Tyr 4:225 - Tyr 4:226   [ RasMol ]  
    Tyr 6:689 - Asn 6:690   [ RasMol ]  
    Tyr 7:571 - Gly 7:572   [ RasMol ]  
    Tyr D:256 - Thr D:257   [ RasMol ]  
    Val 4:351 - Cys 4:352   [ RasMol ]  
    Val 5:321 - Ala 5:322   [ RasMol ]  
    Val 5:337 - Glu 5:338   [ RasMol ]  
    Val 6:100 - Lys 6:101   [ RasMol ]  
    Val 6:103 - Asp 6:104   [ RasMol ]  
    Val 7:619 - His 7:620   [ RasMol ]  
    Val A:147 - Asp A:148   [ RasMol ]  
    Val D:216 - Asn D:217   [ RasMol ]  
    Val D:258 - Thr D:259   [ RasMol ]  
    Val D:267 - Glu D:268   [ RasMol ]  
    Val E:310 - Lys E:311   [ RasMol ]  
 

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CDC45_YEAST | Q080323jc5 3jc6 3jc7 5u8s
        MCM2_YEAST | P294693ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        MCM3_YEAST | P242793ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        MCM4_YEAST | P306653ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        MCM5_YEAST | P294963ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        MCM6_YEAST | P530913ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        MCM7_YEAST | P381323ja8 3jc5 3jc6 3jc7 5h7i 5u8s 5udb 5v8f 5xf8
        PSF1_YEAST | Q124883jc5 3jc6 3jc7 5u8s
        PSF2_YEAST | P403593jc5 3jc6 3jc7 5u8s
        PSF3_YEAST | Q121463jc5 3jc6 3jc7 5u8s
        SLD5_YEAST | Q034063jc5 3jc6 3jc7 4c95 5u8s

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5U8T)