Show PDB file:   
         Plain Text   HTML   (compressed file size)
QuickSearch:   
by PDB,NDB,UniProt,PROSITE Code or Search Term(s)  
(-)Asym./Biol. Unit
collapse expand < >
Image Asym./Biol. Unit
Asym./Biol. Unit  (Jmol Viewer)

(-) Description

Title :  NEAR-ATOMIC RESOLUTION CRYO-EM STRUCTURE OF THE SALMONELLA SPI-1 TYPE III SECRETION INJECTISOME SECRETIN INVG
 
Authors :  L. J. Worrall, C. Hong, M. Vuckovic, J. R. C. Bergeron, R. K. Huang, Z. Yu, N. C. J. Strynadka
Date :  15 Sep 16  (Deposition) - 21 Dec 16  (Release) - 11 Jan 17  (Revision)
Method :  ELECTRON MICROSCOPY
Resolution :  3.60
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O
Keywords :  Bacterial, Secretion, Injectisome, Membrane Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  L. J. Worrall, C. Hong, M. Vuckovic, W. Deng, J. R. Bergeron, D. D. Majewski, R. K. Huang, T. Spreter, B. B. Finlay, Z. Yu, N. C. Strynadka
Near-Atomic-Resolution Cryo-Em Analysis Of The Salmonella T3S Injectisome Basal Body.
Nature V. 540 597 2016
PubMed-ID: 27974800  |  Reference-DOI: 10.1038/NATURE20576

(-) Compounds

Molecule 1 - PROTEIN INVG
    Chains: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O
    Organism Scientific: SALMONELLA ENTERICA SUBSP. ENTERICA SEROVAR TYPHIMURIUM
    Organism Taxid: 90371

 Structural Features

(-) Chains, Units

  123456789101112131415
Asymmetric/Biological Unit : ABCDEFGHIJKLMNO

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5TCQ)

(-) Sites  (0, 0)

(no "Site" information available for 5TCQ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5TCQ)

(-) Cis Peptide Bonds  (15, 15)

Asymmetric/Biological Unit
No.Residues
1Thr A:523 -Pro A:524
2Thr B:523 -Pro B:524
3Thr C:523 -Pro C:524
4Thr D:523 -Pro D:524
5Thr E:523 -Pro E:524
6Thr F:523 -Pro F:524
7Thr G:523 -Pro G:524
8Thr H:523 -Pro H:524
9Thr I:523 -Pro I:524
10Thr J:523 -Pro J:524
11Thr K:523 -Pro K:524
12Thr L:523 -Pro L:524
13Thr M:523 -Pro M:524
14Thr N:523 -Pro N:524
15Thr O:523 -Pro O:524

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5TCQ)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5TCQ)

(-) Exons   (0, 0)

(no "Exon" information available for 5TCQ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq A 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain B from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq B 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain C from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq C 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain D from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq D 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain E from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq E 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain F from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq F 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain G from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq G 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain H from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq H 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain I from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq I 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain J from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq J 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain K from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq K 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain L from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq L 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain M from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq M 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain N from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq N 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267                                                                                                                                                                                                                                                                                                  


Chain O from PDB  Type:PROTEIN  Length:336
                                                                                                                                                                                                                                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ..ee..eeeeeee........eeeee..eeeee.hhhhhhhhhhh.eeeeehhh.eeeeeeehhhhhhhhhhhhhhh....eeeeeeeeeeeeeeeeeeeeeeeeeeeee...eeeee...hhhhhh...eeeeeeeeeeeeeeeeeeeeeeeee....eeeeeeeeeeee........eeeeeeeeeeeeeeee.....eeeeeeeeeeee......hhhhh.....eeeeeeeeeeee.....eeeeeeeeeeeeeeeee..hhhhh..hhhhh.eeeeeeeeeeeeeeeeeeee......hhhhhhhhhhhhh.........hhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5tcq O 172 GIELGRQKIGVMRLNNTFVGDRTYNLRDQKMVIPGIATAIERLLQIKIVAYPDTNSLLVKGTAEQVHFIEMLVKALDVAKRHVELSLWIVDLNKSDLERLGTSWSGSITIGDKLGVSLNQSSISTLDGSRFIAAVNALEEKKQATVVSRPVLLTQENVPAIFDNNRTFYTKLIGERNVALEHVTYGTMIRVLPRFSADGQIEMSLDIEDGNDKTPQSDTTTSVDALPEVGRTLISTIARVPHGKSLLVGGYTRDANTDTVQSIPFLGKLPLIGSLFRYSSKNKSNVVRVFMIEPKEIVDPLTPDASESVNNILKQSGAWSGDDKLQKWVRVYLDRG 557
                                   181       191       201       211    || 271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441       451       461       471       481       491       501       511       521       531       541       551      
                                                                      216|                                                                                                                                                                                                                                                                                                  
                                                                       267
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5TCQ)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5TCQ)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5TCQ)

(-) Gene Ontology  (7, 7)

Asymmetric/Biological Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric/Biological Unit
  Complete Structure
    Jena3D(integrated viewing of ligand, site, SAP, PROSITE, SCOP information)
    WebMol | AstexViewer[tm]@PDBe
(Java Applets, require no local installation except for Java; loading may be slow)
    STRAP
(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    RasMol
(require local installation)
    Molscript (VRML)
(requires installation of a VRML viewer; select preferred view via VRML and generate a mono or stereo PDF format file)
 
  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 5tcq)
 
  Sites
(no "Sites" information available for 5tcq)
 
  Cis Peptide Bonds
    Thr A:523 - Pro A:524   [ RasMol ]  
    Thr B:523 - Pro B:524   [ RasMol ]  
    Thr C:523 - Pro C:524   [ RasMol ]  
    Thr D:523 - Pro D:524   [ RasMol ]  
    Thr E:523 - Pro E:524   [ RasMol ]  
    Thr F:523 - Pro F:524   [ RasMol ]  
    Thr G:523 - Pro G:524   [ RasMol ]  
    Thr H:523 - Pro H:524   [ RasMol ]  
    Thr I:523 - Pro I:524   [ RasMol ]  
    Thr J:523 - Pro J:524   [ RasMol ]  
    Thr K:523 - Pro K:524   [ RasMol ]  
    Thr L:523 - Pro L:524   [ RasMol ]  
    Thr M:523 - Pro M:524   [ RasMol ]  
    Thr N:523 - Pro N:524   [ RasMol ]  
    Thr O:523 - Pro O:524   [ RasMol ]  
 

(-) Still Images

Jmol
  protein: cartoon or spacefill or dots and stick; nucleic acid: cartoon and stick; ligands: spacefill; active site: stick
[ Asym./Biol. Unit PNG format ](automatic orientation, automatically generated)
Molscript
  protein, nucleic acid: cartoon; ligands: spacefill; active site: ball and stick
[ mono PDF format | stereo PDF format ](default orientation, automatically generated)

 Databases and Analysis Tools

(-) Databases

Access by PDB/NDB ID
  5tcq
    Family and Domain Information: ProDom | SYSTERS
    General Structural Information: GlycoscienceDB | MMDB | NDB | OCA | PDB | PDBe | PDBj | PDBsum | PDBWiki | PQS | PROTEOPEDIA
    Orientation in Membranes: OPM
    Protein Surface: SURFACE
    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
    Structural Genomics: GeneCensus
    Structural Neighbours: CE | VAST
    Structure Classification: CATH | Dali | SCOP
    Validation and Original Data: BMRB Data View | BMRB Restraints Grid | EDS | PROCHECK | RECOORD | WHAT_CHECK
 
Access by UniProt ID/Accession number
  INVG_SALTY | P35672
    Comparative Protein Structure Models: ModBase
    Genomic Information: Ensembl
    Protein-protein Interaction: DIP
    Sequence, Family and Domain Information: InterPro | Pfam | SMART | UniProtKB/SwissProt
 
Access by Enzyme Classificator   (EC Number)
  (no 'Enzyme Classificator' available)
    General Enzyme Information: BRENDA | EC-PDB | Enzyme | IntEnz
    Pathway: KEGG | MetaCyc
 
Access by Disease Identifier   (MIM ID)
  (no 'MIM ID' available)
    Disease Information: OMIM
 
Access by GenAge ID
  (no 'GenAge ID' available)
    Age Related Information: GenAge

(-) Analysis Tools

Access by PDB/NDB ID
    Domain Information: XDom
    Interatomic Contacts of Structural Units: CSU
    Ligand-protein Contacts: LPC
    Protein Cavities: castP
    Sequence and Secondary Structure: PDBCartoon
    Structure Alignment: STRAP(Java WebStart application, automatic local installation, requires Java; full application with system access!)
    Structure and Sequence Browser: STING
 
Access by UniProt ID/Accession number
  INVG_SALTY | P35672
    Protein Disorder Prediction: DisEMBL | FoldIndex | GLOBPLOT (for more information see DisProt)

 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        INVG_SALTY | P35672: 2y9k 3j1v 4g08 5tcr

(-) Related Entries Specified in the PDB File

5tcp 5tcr