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(-) Description

Title :  CRYSTAL STRUCTURE OF THE UNIQUE PARVALBUMIN COMPONENT FROM MUSCLE OF THE LEOPARD SHARK (TRIAKIS SEMIFASCIATA). THE FIRST X-RAY STUDY OF AN ALPHA-PARVALBUMIN
 
Authors :  F. Roquet, J. -P. Declercq, B. Tinant, J. Rambaud, J. Parello
Date :  25 Sep 91  (Deposition) - 31 Oct 93  (Release) - 24 Feb 09  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.54
Chains :  Asym./Biol. Unit :  A
Keywords :  Calcium-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  F. Roquet, J. P. Declercq, B. Tinant, J. Rambaud, J. Parello
Crystal Structure Of The Unique Parvalbumin Component From Muscle Of The Leopard Shark (Triakis Semifasciata). The First X-Ray Study Of An Alpha-Parvalbumin.
J. Mol. Biol. V. 223 705 1992
PubMed-ID: 1542115  |  Reference-DOI: 10.1016/0022-2836(92)90985-S
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - PARVALBUMIN
    ChainsA
    EngineeredYES
    Organism CommonLEOPARD SHARK
    Organism ScientificTRIAKIS SEMIFASCIATA
    Organism Taxid30493

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 2)

Asymmetric/Biological Unit (1, 2)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION

(-) Sites  (4, 4)

Asymmetric Unit (4, 4)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:90 , ASP A:92 , ASP A:94 , LYS A:96 , GLU A:101 , HOH A:246BINDING SITE FOR RESIDUE CA A 110
2AC2SOFTWAREASP A:51 , ASP A:53 , SER A:55 , PHE A:57 , GLU A:59 , GLU A:62BINDING SITE FOR RESIDUE CA A 111
3CDAUTHORASP A:51 , LYS A:52 , ASP A:53 , GLN A:54 , SER A:55 , GLY A:56 , PHE A:57 , ILE A:58 , GLU A:59 , GLU A:60 , GLU A:61 , GLU A:62CATION BINDING SITE OCCUPIED BY CA 111
4EFAUTHORASP A:90 , SER A:91 , ASP A:92 , HIS A:93 , ASP A:94 , GLY A:95 , LYS A:96 , ILE A:97 , GLY A:98 , ALA A:99 , ASP A:100 , GLU A:101CATION BINDING SITE OCCUPIED BY CA 110

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5PAL)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5PAL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5PAL)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5PAL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains d5pala_ A: Parvalbumin                                                                                        SCOP domains
               CATH domains 5palA00 A:1-109 EF-hand                                                                                       CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhh........hhhhhhhh......hhhhhhhhhhh......ee.hhhhhhhhhhh........hhhhhhhhhhh.......eehhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 5pal A   1 PMTKVLKADDINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109
                                    10        20        30        40        50        60        70        80        90       100         

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 Classification and Annotation

(-) SCOP Domains  (1, 1)

Asymmetric/Biological Unit

(-) CATH Domains  (1, 1)

Asymmetric/Biological Unit

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5PAL)

(-) Gene Ontology  (2, 2)

Asymmetric/Biological Unit(hide GO term definitions)

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