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(-) Description

Title :  STRUCTURE OF THE APO FORM OF THE NO RESPONSE REGULATOR NSRR
 
Authors :  A. Volbeda, J. C. Fontecilla-Camps
Date :  02 Feb 17  (Deposition) - 26 Apr 17  (Release) - 03 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.90
Chains :  Asym. Unit :  A,B,C,D,E
Biol. Unit 1:  A  (2x)
Biol. Unit 2:  B,D  (1x)
Biol. Unit 3:  C,E  (1x)
Keywords :  No Sensor, Apo Form, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. Volbeda, E. L. Dodd, C. Darnault, J. C. Crack, O. Renoux, M. I. Hutchings, N. E. Le Brun, J. C. Fontecilla-Camps
Crystal Structures Of The No Sensor Nsrr Reveal How Its Iron-Sulfur Cluster Modulates Dna Binding.
Nat Commun V. 8 15052 2017
PubMed-ID: 28425466  |  Reference-DOI: 10.1038/NCOMMS15052

(-) Compounds

Molecule 1 - HTH-TYPE TRANSCRIPTIONAL REPRESSOR NSRR
    Chains: A, B, C, D, E
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: NSRR, SCO7427, SC6D11.23
    Mutation: YES
    Organism Scientific: STREPTOMYCES COELICOLOR (STRAIN ATCC BAA-471 / A3(2) / M145)
    Organism Taxid: 100226

 Structural Features

(-) Chains, Units

  12345
Asymmetric Unit : ABCDE
Biological Unit 1 (2x): A    
Biological Unit 2 (1x):  B D 
Biological Unit 3 (1x):   C E

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5N08)

(-) Sites  (0, 0)

(no "Site" information available for 5N08)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5N08)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5N08)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5N08)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5N08)

(-) Exons   (0, 0)

(no "Exon" information available for 5N08)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n08 A   2 RLTKFTDLALRSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGVVEARLTLTDLGRRVSVGWLVRELEGEAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVTDLVAAP 134
                                    11        21        31        41        51       |67        77        87        97       107       117       127       
                                                                                    59|                                                                    
                                                                                     66                                                                    


Chain B from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n08 B   2 RLTKFTDLALRSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGVVEARLTLTDLGRRVSVGWLVRELEGEAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVTDLVAAP 134
                                    11        21        31        41        51       |67        77        87        97       107       117       127       
                                                                                    59|                                                                    
                                                                                     66                                                                    


Chain C from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n08 C   2 RLTKFTDLALRSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGVVEARLTLTDLGRRVSVGWLVRELEGEAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVTDLVAAP 134
                                    11        21        31        41        51       |67        77        87        97       107       117       127       
                                                                                    59|                                                                    
                                                                                     66                                                                    


Chain D from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.......hhhhhhhhhh.hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n08 D   2 RLTKFTDLALRSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGVVEARLTLTDLGRRVSVGWLVRELEGEAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVTDLVAAP 134
                                    11        21        31        41        51       |67        77        87        97       107       117       127       
                                                                                    59|                                                                    
                                                                                     66                                                                    


Chain E from PDB  Type:PROTEIN  Length:127
                                                                                                                                                               
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhhhhh.......hhhhhhhhh..hhhhhhhhhhhhhhh..ee...eehhhhhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhh..hhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5n08 E   2 RLTKFTDLALRSLMRLAVVRDGDEPLATREVAEVVGVPYTHAAKAITRLQHLGVVEARLTLTDLGRRVSVGWLVRELEGEAEVVDAEGDNPAPLRGAARLRRALRDAQEAFYAALDPLTVTDLVAAP 134
                                    11        21        31        41        51       |67        77        87        97       107       117       127       
                                                                                    59|                                                                    
                                                                                     66
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5N08)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5N08)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5N08)

(-) Gene Ontology  (6, 6)

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  5n08
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        NSRR_STRCO | Q9L132: 5n07

(-) Related Entries Specified in the PDB File

5n07 5N07 CORRESPONDS TO HOLO [4FE-4S]-NSRR