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(-) Description

Title :  E. COLI DNA GYRASE B 24 KDA ATPASE DOMAIN IN COMPLEX WITH 1-ETHYL-3-[8-METHYL-5-(2-METHYL-PYRIDIN-4-YL)-ISOQUINOLIN-3-YL]-UREA
 
Authors :  P. Panchaud, T. Bruyere, A. -C. Blumstein, D. Bur, A. Chambovey, E. A. Er M. Gude, C. Hubschwerlen, L. Jacob, T. Kimmerlin, T. Pfeifer, L. Prade P. Seiler, D. Ritz, G. Rueedi
Date :  12 Dec 16  (Deposition) - 26 Apr 17  (Release) - 24 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.90
Chains :  Asym./Biol. Unit :  A
Keywords :  Inhibitor, 009, Isomerase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  P. Panchaud, T. Bruyere, A. C. Blumstein, D. Bur, A. Chambovey, E. A. Ertel, M. Gude, C. Hubschwerlen, L. Jacob, T. Kimmerlin, T. Pfeifer, L. Prade, P. Seiler, D. Ritz, G. Rueedi
Discovery And Optimization Of Isoquinoline Ethyl Ureas As Antibacterial Agents.
J. Med. Chem. V. 60 3755 2017
PubMed-ID: 28406299  |  Reference-DOI: 10.1021/ACS.JMEDCHEM.6B01834

(-) Compounds

Molecule 1 - DNA GYRASE SUBUNIT B
    Chains: A
    EC Number: 5.99.1.3
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: GYRB, Z5190, ECS4634
    Organism Taxid: 83334

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1O541Ligand/Ion1-ETHYL-3-[8-METHYL-5-(2-METHYLPYRIDIN-4-YL)ISOQUINOLIN-3-YL]UREA

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL A:43 , ASN A:46 , ALA A:47 , GLU A:50 , VAL A:71 , ASP A:73 , GLY A:77 , ILE A:78 , PRO A:79 , ILE A:94 , HOH A:424 , HOH A:471 , HOH A:473binding site for residue O54 A 301

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5MMN)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5MMN)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5MMN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5MMN)

(-) Exons   (0, 0)

(no "Exon" information available for 5MMN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh....eeeeee.....eeeee...............hhhhhhhhh.....hhhhh...hhhhhhhheeeeeeeeee..eeeeeeee..ee....eeeee....eeeeeeee...........hhhhhhhhhhhhhhhh...eeeeee.....eeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mmn A   7 SSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEIIVTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLNSYKVSGGLHGVGVSVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVTEFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYE 219
                                    16        26        36        46        56        66        76        86        96 ||    114       124       134       144       154       164       174       184       194       204       214     
                                                                                                                      98|                                                                                                                
                                                                                                                      107
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5MMN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5MMN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5MMN)

(-) Gene Ontology  (13, 13)

Asymmetric/Biological Unit(hide GO term definitions)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        GYRB_ECO57 | P0AES7: 1aj6 1ei1 1kzn 4zvi 5mmo 5mmp

(-) Related Entries Specified in the PDB File

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