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(-) Description

Title :  T3D REOVIRUS SIGMA1 COMPLEXED WITH 9BG5 FAB FRAGMENTS
 
Authors :  T. Stehle, M. H. Dietrich
Date :  25 Nov 16  (Deposition) - 15 Feb 17  (Release) - 15 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R
Biol. Unit 1:  A,B,C,H,I,J,K,Q,R  (1x)
Biol. Unit 2:  D,E,F,G,L,M,N,O,P  (1x)
Keywords :  Reovirus Sigma1, Virus Antibody Complex, Neutralization, Viral Protein, Immune System (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. H. Dietrich, K. M. Ogden, S. P. Katen, K. Reiss, D. M. Sutherland, R. H. Carnahan, M. Goff, T. Cooper, T. S. Dermody, T. Stehle
Structural Insights Into Reovirus Sigma 1 Interactions With Two Neutralizing Antibodies.
J. Virol. V. 91 2017
PubMed-ID: 27928010  |  Reference-DOI: 10.1128/JVI.01621-16

(-) Compounds

Molecule 1 - VIRAL ATTACHMENT PROTEIN SIGMA 1
    Chains: A, B, C, D, E, F
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: S1
    Organism Scientific: REOVIRUS SP.
    Organism Taxid: 10891
 
Molecule 2 - 9BG5 FAB LIGHT CHAIN,LOC100046793 PROTEIN,MAB 110 LIGHT CHAIN
    Chains: G, H, J, L, O, Q
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Other Details: DUE TO POORLY DEFINED ELECTRON DENSITY THE CONSTANT REGION OF THE FAB FRAGMENT WAS NOT BUILT FOR CHAIN J AND CHAIN L
 
Molecule 3 - 9BG5 FAB HEAVY CHAIN
    Chains: I, K, M, N, P, R
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Other Details: DUE TO POORLY DEFINED ELECTRON DENSITY THE CONSTANT REGION OF THE FAB FRAGMENT WAS NOT BUILT FOR CHAIN K AND CHAIN M

 Structural Features

(-) Chains, Units

  123456789101112131415161718
Asymmetric Unit : ABCDEFGHIJKLMNOPQR
Biological Unit 1 (1x): ABC    HIJK     QR
Biological Unit 2 (1x):    DEFG    LMNOP  

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5MHR)

(-) Sites  (0, 0)

(no "Site" information available for 5MHR)

(-) SS Bonds  (20, 20)

Asymmetric Unit
No.Residues
1G:23 -G:89
2G:134 -G:194
3H:23 -H:89
4H:134 -H:194
5I:22 -I:96
6I:148 -I:203
7J:23 -J:89
8K:22 -K:96
9L:23 -L:89
10M:22 -M:96
11N:22 -N:96
12N:148 -N:203
13O:23 -O:89
14O:134 -O:194
15P:22 -P:96
16P:148 -P:203
17Q:23 -Q:89
18Q:134 -Q:194
19R:22 -R:96
20R:148 -R:203

(-) Cis Peptide Bonds  (29, 29)

Asymmetric Unit
No.Residues
1Tyr A:298 -Pro A:299
2Pro A:376 -Pro A:377
3Tyr B:298 -Pro B:299
4Pro B:376 -Pro B:377
5Tyr C:298 -Pro C:299
6Pro C:376 -Pro C:377
7Tyr D:298 -Pro D:299
8Pro D:376 -Pro D:377
9Tyr E:298 -Pro E:299
10Pro E:376 -Pro E:377
11Tyr F:298 -Pro F:299
12Pro F:376 -Pro F:377
13Ser G:7 -Pro G:8
14Tyr G:140 -Pro G:141
15Ser H:7 -Pro H:8
16Tyr H:140 -Pro H:141
17Phe I:154 -Pro I:155
18Glu I:156 -Pro I:157
19Ser J:7 -Pro J:8
20Ser L:7 -Pro L:8
21Phe N:154 -Pro N:155
22Glu N:156 -Pro N:157
23Ser O:7 -Pro O:8
24Tyr O:140 -Pro O:141
25Phe P:154 -Pro P:155
26Glu P:156 -Pro P:157
27Ser Q:7 -Pro Q:8
28Tyr Q:140 -Pro Q:141
29Glu R:156 -Pro R:157

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5MHR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5MHR)

(-) Exons   (0, 0)

(no "Exon" information available for 5MHR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:162
                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eee....eeehhhhhheeeeeeeeeeee....eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr A 294 PNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT 455
                                   303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453  


Chain B from PDB  Type:PROTEIN  Length:163
                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee....eeehhhhhheeeeeeeeeeeee...eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr B 293 SPNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT 455
                                   302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452   


Chain C from PDB  Type:PROTEIN  Length:162
                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......eee....eeehhhhhheeeeeeeeeeee....eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr C 293 SPNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSF 454
                                   302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452  


Chain D from PDB  Type:PROTEIN  Length:163
                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee....eeehhhhhheeeeeeeeeeee....eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr D 293 SPNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT 455
                                   302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452   


Chain E from PDB  Type:PROTEIN  Length:162
                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......eee....eeehhhhhheeeeeeeeeeee....eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr E 294 PNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT 455
                                   303       313       323       333       343       353       363       373       383       393       403       413       423       433       443       453  


Chain F from PDB  Type:PROTEIN  Length:163
                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......eee....eeehhhhhheeeeeeeeeeee....eeeeeeeeeeeee..eeeeee..eeee....eeeeeee.........hhhhhh.........eeeeeeeeeee.....eeeeeeeeeeeee..eeeeeee........eeee..eeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr F 293 SPNLRYPIADVSGGIGMSPNYRFRQSMWIGIVSYSGSGLNWRVQVNSDIFIVDDYIHICLPAFDGFSIADGGDLSLNFVTGLLPPLLTGDTEPAFHNDVVTYGAQTVAIGLSSGGTPQYMSKNLWVEQWQDGVLRLRVEGGGSITHSNSKWPAMTVSYPRSFT 455
                                   302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452   


Chain G from PDB  Type:PROTEIN  Length:211
                                                                                                                                                                                                                                                   
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeeeeeeehhh.eeeeee......eeeee...ee.......eeeeeeeeeeeeee...hhhhh.eeeeee.....ee...eeeee.......eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhh...eeeeeee.......eeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr G   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210 


Chain H from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee....hhh.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee.....ee...eeeee.......eeeee..hhhhhhh.eeeeeeeeeee.....eee.......eeeee.........eeeeeeeeee.........eeeee.......eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr H   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDKWKIDGSEQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKSTSPIVKSFN 210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140  ||   153||     164       174       184       194    || 205     
                                                                                                                                                                        143|    154|                                        199|         
                                                                                                                                                                         147     156                                         201         


Chain I from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeee.....eeeeeee.......ee.hhhh..eeeeee....eeeeee...hhhhh.eeeeeee..........ee...eeeee........eeeee.....eeeeeeeeeee.....eeee........eeeeeeeee..eeeeeeeeeee.hhhhhh..eeeeee....eeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr I   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTVSSAKTTAPSVYPLVPTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKI 218
                                    10        20        30        40        50        60        70        80        90       100       110       120       130   ||  145       155       165       175       185       195       205       215   
                                                                                                                                                               134|                                                                              
                                                                                                                                                                140                                                                              


Chain J from PDB  Type:PROTEIN  Length:108
                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eeee.....eeeeeee....hhh.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee.....ee...eeeee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr J   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIKR 108
                                    10        20        30        40        50        60        70        80        90       100        


Chain K from PDB  Type:PROTEIN  Length:122
                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeee....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhh.eeeeeee..........ee...eeeee.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr K   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTVSSAK 123
                                    10        20        30        40||      51        61        71        81        91       101       111       121  
                                                                   41|                                                                                
                                                                    43                                                                                


Chain L from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeee..eee......eeeeeee....hhh.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee.....ee...eeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5mhr L   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIK 107
                                    10        20        30        40        50        60        70        80        90       100       


Chain M from PDB  Type:PROTEIN  Length:119
                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...ee......eeeeeeee.......eeeeeee.....eeeeeee.......ee.......eeeeee....eeeeee...hhhhh.eeeeeee..........ee...eeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr M   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTV 119
                                    10        20        30        40        50        60        70        80        90       100       110         


Chain N from PDB  Type:PROTEIN  Length:214
                                                                                                                                                                                                                                                      
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeee.....eeeeeee.......ee.hhhh..eeeeee....eeeeee...hhhhh.eeeeeee..........ee...eeeee........eeeee.....eeeeeeeeeee.....eeee........eeeeeeeee..eeeeeeeeeee.hhhhhh..eeeeee....eeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr N   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTVSSAKTTAPSVYPLVPTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIE 219
                                    10        20        30        40        50        60        70        80        90       100       110       120       130   ||  145       155       165       175       185       195       205       215    
                                                                                                                                                               134|                                                                               
                                                                                                                                                                140                                                                               


Chain O from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eee......eeeeeeeeeeehhh.eeeeee......eeeee...ee.......eeeeeeeeeeeeee...hhhhh.eeeeee.....ee....eee........eeeee..hhhhhh..eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhhhh..eeeeee............. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr O   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVSFNR 211
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     ||211
                                                                                                                                                                                                                                       206|   
                                                                                                                                                                                                                                        208   


Chain P from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee........eeeeee.....eeeeeee......eee.......eeeeee....eeeeee...hhhhheeeeeee...........ee...eeeee........eeeee....eeeeeeeeeee.....eeee........eee.........eeeeeeeeee.hhhhhh..eeeeee....eeeeee.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr P   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTVSSAKTTAPSVYPLVPVSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIE 219
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 146       156       166       176       186       196       206       216   
                                                                                                                                                                135|                                                                             
                                                                                                                                                                 142                                                                             


Chain Q from PDB  Type:PROTEIN  Length:210
                                                                                                                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...eeee..eee......eeeeeee....hhh.eeeeee......eeeee...ee.......eeeeee..eeeeee...hhhhh.eeeeee.....ee...eeee........eeeee..hhhhhhh.eeeeeeeeeee.....eeeeee..eee...eeeee.........eeeeeeeeeehhhhh....eeeeee.......eeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5mhr Q   1 EIVLTQSPTTMAASPGEKIIITCSASSSISSNYLHWYQQKPGCSPKLLIYRTSKLASGVPARFSGSGSGTSYSLTIGTMEAEDVATYYCQQGSSIYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFN 210
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210


Chain R from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeee...eee.....eeeeeeee.......eeeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeee...............eeeee........eeeee.....eeeeeeeeeee.....eeee........eeeeeee....eeeeeeeeee.hhhhhh...eeeee....ee...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mhr R   1 EVQLQQSGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWIGLINPYNDGPSYNQNFKGKATLTVDKSSSTAYMELLSLTSEDSAVYYCAIHYYGISYWYFDVWGAGTTVTVSSAKTTAPSVYPLVPVGSSVTLGCLVKGYFPEPVTLTWNSGSLSSVHTFPALLQSGLYTLSSSVTVTSNTWPSQTITCNVAHPASSTKVDKKIE 219
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    || 145       155       165   ||  176       186       196       206       216   
                                                                                                                                                                135|                         169|                                                
                                                                                                                                                                 141                          171
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5MHR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5MHR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5MHR)

(-) Gene Ontology  (3, 3)

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