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(-) Description

Title :  SOLUTION NMR STRUCTURE OF HUMAN LARP7 XRRM2
 
Authors :  C. D. Eichhorn, J. Feigon
Date :  28 Jun 16  (Deposition) - 12 Oct 16  (Release) - 14 Dec 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Xrrm, Rrm, 7Sk, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. D. Eichhorn, R. Chug, J. Feigon
Hlarp7 C-Terminal Domain Contains An Xrrm That Binds The 3' Hairpin Of 7Sk Rna.
Nucleic Acids Res. V. 44 9977 2016
PubMed-ID: 27679474  |  Reference-DOI: 10.1093/NAR/GKW833

(-) Compounds

Molecule 1 - LA-RELATED PROTEIN 7
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'
    Expression System Taxid: 866768
    Fragment: RESIDUES 445-561
    Gene: LARP7, HDCMA18P
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: LA RIBONUCLEOPROTEIN DOMAIN FAMILY MEMBER 7,P-TEFB- INTERACTION PROTEIN FOR 7SK STABILITY,PIP7S

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5KNW)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5KNW)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5KNW)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:125
                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...................eeeee......hhhhhhhhhhhhh...eeee.....eeeee..hhhhhhhhhhhhhhhhhh...eeee.hhhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------- Transcript
                 5knw A 437 MHHHHHHSNATGPQFVSGVIVKIISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHCWKLEILSGDHEQRYWQKILVDRQAKLNQPREKKRGTEKLITKA 561
                                   446       456       466       476       486       496       506       516       526       536       546       556
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5KNW)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (10, 10)

NMR Structure(hide GO term definitions)

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  5knw
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  LARP7_HUMAN | Q4G0J3
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        LARP7_HUMAN | Q4G0J3: 4wkr

(-) Related Entries Specified in the PDB File

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