5KET - JenaLib

Title :   STRUCTURE OF THE ALDO-KETO REDUCTASE FROM COPTOTERMES GESTROI

Authors :   M. L. Liberato, B. M. Campos, R. Tramontina, F. M. Squina

Date :   10 Jun 16 (Deposition) - 18 Jan 17 (Release) - 18 Jan 17 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.85

Chains :   Asym. Unit : A,B
Biol. Unit 1: A  (1x)
Biol. Unit 2: B  (1x)

Keywords :   Aldo-Keto Reductase, Coptotermes Gestroi, Celulose Degradation, Nadp, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   R. Tramontina, J. P. Franco Cairo, M. V. Liberato, F. Mandelli, A. Sousa, S. Santos, S. C. Rabelo, B. Campos, J. Ienczak, R. Ruller, A. R. Damasio, F. M. Squina
The Coptotermes Gestroi Aldo-Keto Reductase: A Multipurpose Enzyme For Biorefinery Applications.
Biotechnol Biofuels V. 10 4 2017
PubMed-ID: 28053664 | Reference-DOI: 10.1186/S13068-016-0688-6

Compounds

Molecule 1 - ALDO-KETO REDUCTASE 1
	Chains	:	A, B
	Engineered	:	YES
	Expression System	:	ESCHERICHIA COLI
	Expression System Taxid	:	562
	Organism Scientific	:	COPTOTERMES GESTROI
	Organism Taxid	:	232242

Structural Features

Chains, Units

		1	2
Asymmetric Unit	:	A	B
Biological Unit 1 (1x)	:	A
Biological Unit 2 (1x)	:		B

Summary Information (see also Sequences/Alignments below)

Ligands, Modified Residues, Ions (1, 2)

Asymmetric Unit (1, 2)

No.	Name	Count	Type	Full Name
1	NAP	2	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 1 (1, 1)

No.	Name	Count	Type	Full Name
1	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Biological Unit 2 (1, 1)

No.	Name	Count	Type	Full Name
1	NAP	1	Ligand/Ion	NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE

Sites (2, 2)

Asymmetric Unit (2, 2)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	GLY A:22 , THR A:23 , TRP A:24 , ASP A:47 , TYR A:52 , LYS A:81 , HIS A:114 , SER A:166 , ASN A:167 , GLN A:188 , TYR A:214 , ALA A:215 , PRO A:216 , ILE A:217 , GLY A:218 , SER A:219 , PRO A:220 , ALA A:259 , ILE A:274 , PRO A:275 , LYS A:276 , SER A:277 , THR A:278 , ASN A:279 , ARG A:282 , GLU A:285 , ASN A:286 , PHE A:314	binding site for residue NAP A 400
2	AC2	SOFTWARE	GLY B:22 , THR B:23 , TRP B:24 , ASP B:47 , TYR B:52 , LYS B:81 , HIS B:114 , SER B:166 , ASN B:167 , GLN B:188 , TYR B:214 , ALA B:215 , PRO B:216 , ILE B:217 , GLY B:218 , SER B:219 , PRO B:220 , ALA B:259 , ILE B:274 , LYS B:276 , SER B:277 , THR B:278 , ARG B:282 , GLU B:285 , ASN B:286	binding site for residue NAP B 400

SS Bonds (0, 0)

Cis Peptide Bonds (5, 5)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
	Number of residues per labelling interval =
	UniProt sequence: complete aligned part

Show mapping:	SCOP domains	CATH domains	Pfam domains	Secondary structure (by author)
	SAPs(SNPs)	PROSITE motifs	Exons
	(details for a mapped element are shown in a popup box when the mouse pointer rests over it)

Chain A from PDB  Type:PROTEIN  Length:328
                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee.....ee....ee....hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh...eeeeee....ee..................ee...hhhhhhhhhhhhhhh..eeeeeee..hhhhhhhhhhhh.....eeeee......hhhhhhhhhhh..eeeee......hhhhhhhhh....hhhhhh....hhhhhhhhhhhh.hhhhhhhhhhhh...ee.....hhhhhhhhhh......hhhhhhhhhhh.............hhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ket A   7 SVTFHNGRKMPVVGLGTWQSPPEEVTAAIDVALEVGYRHIDTAFMYQNEAAIGKTLKKWFDSGKLKREDVFIVTKLPPIGNRAESVEKFLTKSLEALQLDYVDLYLIHLPVGFQYKGDDNLWPRGEAGEFLIDTSTDLISLWKAMEAQVDAGRTRSVGLSNFNSRQIARIVKSARIRPANLQVELNVYFQQRELVAFCRALDITVCAYAPIGSPGLANVIKARGAEVPESAKFDPLTDPVVLKIAEHHKKTPAQVLLRHCMQRDIVVIPKSTNAGRIKENFQVFDFELSKAEVDELDSLDKRAAGRRFRMDQYKGLREHPEHPYDEPY 334
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296       306       316       326

Chain B from PDB  Type:PROTEIN  Length:314
                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....eee.....eee.........hhhhhhhhhhhhhhhh..eee.hhhhhhhhhhhhhhhhhhhh...hhhhheeeeeehhhhhhhhhhhhhhhhhhhhhh.....eeee....ee...........ee...hhhhhhhhhhhhhhhh....eeee..hhhhhhhhhhhh.....eeeee......hhhhhhhhhhh..eeeee............hhhhh.hhhhhhhhhhhhhhh..hhhhhhhhhhhh...ee.....hhhhhhhhhh......hhhhhhhhhhhhhhhhhh.................. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ket B   3 KQLSSVTFHNGRKMPVVGLGTWQSPPEEVTAAIDVALEVGYRHIDTAFMYQNEAAIGKTLKKWFDSGKLKREDVFIVTKLPPIGNRAESVEKFLTKSLEALQLDYVDLYLIHLPVGFQYKGDDNLWPLIDTSTDLISLWKAMEAQVDAGRTRSVGLSNFNSRQIARIVKSARIRPANLQVELNVYFQQRELVAFCRALDITVCAYAPIGSPGLANVVPESAKFDPLTDPVVLKIAEHHKKTPAQVLLRHCMQRDIVVIPKSTNAGRIKENFQVFDFELSKAEVDELDSLDKRAAGRRFRMGLREHPEHPYDEPY 334
                                    12        22        32        42        52        62        72        82        92       102       112       122      |139       149       159       169       179       189       199       209       219     ||236       246       256       266       276       286       296       306       316|      330    
                                                                                                                                                        129|                                                                                     225|                                                                                316|             
                                                                                                                                                         137                                                                                      233                                                                                 321

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (0, 0)

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	Cis Peptide Bonds
		Ala A:310 - Gly A:311	[ RasMol ]
		Ala B:310 - Gly B:311	[ RasMol ]
		Leu B:222 - Ala B:223	[ RasMol ]
		Trp A:24 - Gln A:25	[ RasMol ]
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