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(-) Description

Title :  THE CRYSTAL STRUCTURE LARGE RIBOSOMAL SUBUNIT (50S) OF DEINOCOCCUS RADIODURANS IN COMPLEX WITH EVERNIMICIN
 
Authors :  A. Yonath
Date :  11 May 16  (Deposition) - 09 Nov 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.58
Chains :  Asym./Biol. Unit :  A,B,C,D,E,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,1,2,3
Keywords :  Ribosome, Antibiotics (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Krupkin, I. Wekselman, D. Matzov, Z. Eyal, Y. Diskin Posner, H. Rozenberg, E. Zimmerman, A. Bashan, A. Yonath
Avilamycin And Evernimicin Induce Structural Changes In Rproteins Ul16 And Ctc That Enhance The Inhibition Of A-Sit Trna Binding.
Proc. Natl. Acad. Sci. Usa V. 113 E6796 2016
PubMed-ID: 27791159  |  Reference-DOI: 10.1073/PNAS.1614297113

(-) Compounds

Molecule 1 - 23S RIBOSOMAL RNA
    Chains: X
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 2 - 5S RIBOSOMAL RNA
    Chains: Y
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 3 - 50S RIBOSOMAL PROTEIN L2
    Chains: A
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 4 - 50S RIBOSOMAL PROTEIN L3
    Chains: B
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
    Other Details: DEINOCOCCUS
 
Molecule 5 - 50S RIBOSOMAL PROTEIN L4
    Chains: C
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 6 - 50S RIBOSOMAL PROTEIN L5
    Chains: D
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 7 - 50S RIBOSOMAL PROTEIN L6
    Chains: E
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 8 - 50S RIBOSOMAL PROTEIN L13
    Chains: G
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 9 - 50S RIBOSOMAL PROTEIN L14
    Chains: H
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 10 - 50S RIBOSOMAL PROTEIN L15
    Chains: I
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 11 - 50S RIBOSOMAL PROTEIN L16
    Chains: J
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 12 - 50S RIBOSOMAL PROTEIN L17
    Chains: K
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 13 - 50S RIBOSOMAL PROTEIN L18
    Chains: L
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 14 - 50S RIBOSOMAL PROTEIN L19
    Chains: M
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 15 - 50S RIBOSOMAL PROTEIN L20
    Chains: N
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 16 - 50S RIBOSOMAL PROTEIN L21
    Chains: O
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 17 - 50S RIBOSOMAL PROTEIN L22
    Chains: P
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 18 - 50S RIBOSOMAL PROTEIN L23
    Chains: Q
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 19 - 50S RIBOSOMAL PROTEIN L24
    Chains: R
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 20 - 50S RIBOSOMAL PROTEIN L25
    Chains: S
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
    Synonym: GENERAL STRESS PROTEIN CTC
 
Molecule 21 - 50S RIBOSOMAL PROTEIN L27
    Chains: T
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 22 - 50S RIBOSOMAL PROTEIN L28
    Chains: U
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 23 - 50S RIBOSOMAL PROTEIN L29
    Chains: V
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 24 - 50S RIBOSOMAL PROTEIN L30
    Chains: W
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 25 - 50S RIBOSOMAL PROTEIN L32
    Chains: Z
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 26 - 50S RIBOSOMAL PROTEIN L33
    Chains: 1
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 27 - 50S RIBOSOMAL PROTEIN L34
    Chains: 2
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230
 
Molecule 28 - 50S RIBOSOMAL PROTEIN L35
    Chains: 3
    Organism Scientific: DEINOCOCCUS RADIODURANS R1
    Organism Taxid: 243230

 Structural Features

(-) Chains, Units

  12345678910111213141516171819202122232425262728
Asymmetric/Biological Unit : ABCDEGHIJKLMNOPQRSTUVWXYZ123

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 124)

Asymmetric/Biological Unit (2, 124)
No.NameCountTypeFull Name
16O11Ligand/IonEVERNIMICIN
2MG123Ligand/IonMAGNESIUM ION

(-) Sites  (111, 111)

Asymmetric Unit (111, 111)
No.NameEvidenceResiduesDescription
001AC1SOFTWAREARG J:52 , ILE J:53 , SER J:56 , ARG J:57 , ARG J:60 , GLU S:179 , A X:2448 , G X:2449 , A X:2450 , A X:2457 , U X:2458 , C X:2459 , G X:2461 , A X:2509 , G X:2514 , G X:2515binding site for residue 6O1 X 2901
002AC2SOFTWAREG X:2699binding site for residue MG X 2902
003AC3SOFTWAREC X:583binding site for residue MG X 2903
004AC4SOFTWAREC X:1765 , A X:1777binding site for residue MG X 2906
005AC5SOFTWAREG X:844binding site for residue MG X 2907
006AC6SOFTWAREA X:1693binding site for residue MG X 2908
007AC7SOFTWAREG X:1337 , U X:1339 , C X:1340binding site for residue MG X 2909
008AC8SOFTWAREA X:1681 , G X:1975binding site for residue MG X 2910
009AC9SOFTWAREA X:815binding site for residue MG X 2911
010AD1SOFTWAREG X:2661 , A X:2701binding site for residue MG X 2912
011AD2SOFTWAREA X:2684binding site for residue MG X 2913
012AD3SOFTWAREC X:541 , C X:2019binding site for residue MG X 2914
013AD4SOFTWAREU X:800 , C X:803binding site for residue MG X 2915
014AD5SOFTWAREA X:834 , A X:984binding site for residue MG X 2916
015AD6SOFTWAREU X:753 , A X:1774 , A X:1775binding site for residue MG X 2917
016AD7SOFTWAREU X:823 , G X:1266binding site for residue MG X 2918
017AD8SOFTWAREA X:1771 , C X:1773 , A X:1774binding site for residue MG X 2919
018AD9SOFTWAREG X:2015binding site for residue MG X 2921
019AE1SOFTWAREU X:2000binding site for residue MG X 2922
020AE2SOFTWAREC X:1310 , A X:2690 , A X:2692binding site for residue MG X 2923
021AE3SOFTWAREA X:2690 , A X:2692 , G X:2694binding site for residue MG X 2924
022AE4SOFTWAREG X:2007 , G X:2018 , G X:2021binding site for residue MG X 2925
023AE5SOFTWAREA X:763 , A X:764 , A X:1630binding site for residue MG X 2926
024AE6SOFTWAREU X:835binding site for residue MG X 2927
025AE7SOFTWAREU X:1467 , A X:1468binding site for residue MG X 2928
026AE8SOFTWAREA X:576binding site for residue MG X 2930
027AE9SOFTWAREG X:2036 , G X:2555 , A X:2556binding site for residue MG X 2931
028AF1SOFTWAREA X:2497 , C X:2519 , A X:2520binding site for residue MG X 2932
029AF2SOFTWAREG X:2567binding site for residue MG X 2934
030AF3SOFTWAREU X:2057 , G X:2218binding site for residue MG X 2936
031AF4SOFTWAREU X:1656binding site for residue MG X 2937
032AF5SOFTWAREA X:1681 , A X:1682binding site for residue MG X 2938
033AF6SOFTWAREU X:1280 , A X:1281 , C X:1989 , A X:2031binding site for residue MG X 2939
034AF7SOFTWAREA X:956binding site for residue MG X 2941
035AF8SOFTWAREC X:1283 , G X:1284 , A X:1285 , G X:1664 , C X:1665binding site for residue MG X 2942
036AF9SOFTWAREG X:2039 , A X:2040 , A X:2041binding site for residue MG X 2943
037AG1SOFTWAREC X:1687 , U X:1688binding site for residue MG X 2944
038AG2SOFTWAREG X:1887binding site for residue MG X 2945
039AG3SOFTWAREC X:2486 , C X:2552 , G X:2553 , C X:2554binding site for residue MG X 2946
040AG4SOFTWAREA X:1282 , A X:1988binding site for residue MG X 2948
041AG5SOFTWAREU X:1280binding site for residue MG X 2949
042AG6SOFTWAREG X:2656binding site for residue MG X 2950
043AG7SOFTWAREU X:585 , A X:2482binding site for residue MG X 2951
044AG8SOFTWAREC X:169 , A X:176 , U X:2222binding site for residue MG X 2952
045AG9SOFTWAREG X:2044 , G X:2481binding site for residue MG X 2953
046AH1SOFTWAREA X:797 , G X:2567binding site for residue MG X 2954
047AH2SOFTWAREC X:1311 , U X:1656binding site for residue MG X 2955
048AH3SOFTWAREC X:1653binding site for residue MG X 2956
049AH4SOFTWAREA X:743 , C X:744 , A X:774 , U X:775 , G X:776binding site for residue MG X 2957
050AH5SOFTWAREG X:798 , G X:805binding site for residue MG X 2958
051AH6SOFTWAREU X:2222binding site for residue MG X 2959
052AH7SOFTWAREU X:2666binding site for residue MG X 2960
053AH8SOFTWAREA X:2409 , U X:2410 , A X:2411binding site for residue MG X 2961
054AH9SOFTWAREA X:2025binding site for residue MG X 2962
055AI1SOFTWAREC X:226binding site for residue MG X 2963
056AI2SOFTWAREC X:982 , G X:985binding site for residue MG X 2964
057AI3SOFTWAREG X:1767 , A X:1964binding site for residue MG X 2965
058AI4SOFTWAREC X:2008binding site for residue MG X 2966
059AI5SOFTWAREA X:168 , C X:169 , A X:813binding site for residue MG X 2967
060AI6SOFTWAREG X:2561 , G X:2562 , U X:2563binding site for residue MG X 2968
061AI7SOFTWAREALA A:225 , ASN A:227 , A X:796 , A X:797 , A X:2568binding site for residue MG X 2969
062AI8SOFTWAREC X:830 , G X:1201binding site for residue MG X 2970
063AI9SOFTWAREG X:2847binding site for residue MG X 2971
064AJ1SOFTWAREC X:583binding site for residue MG X 2972
065AJ2SOFTWAREC X:959 , U X:973 , U X:974binding site for residue MG X 2973
066AJ3SOFTWAREG X:462 , G X:464binding site for residue MG X 2975
067AJ4SOFTWAREU X:521 , G X:522binding site for residue MG X 2976
068AJ5SOFTWAREU X:2249binding site for residue MG X 2977
069AJ6SOFTWAREG X:462 , C X:465binding site for residue MG X 2978
070AJ7SOFTWAREA X:2618 , G X:2619binding site for residue MG X 2979
071AJ8SOFTWAREU X:577 , A X:984binding site for residue MG X 2980
072AJ9SOFTWAREARG 3:42 , G X:2328binding site for residue MG X 2981
073AK1SOFTWAREU X:839 , C X:2406 , G X:2407 , G X:2408binding site for residue MG X 2983
074AK2SOFTWAREU X:974binding site for residue MG X 2984
075AK3SOFTWAREG X:955 , A X:956 , G X:957binding site for residue MG X 2985
076AK4SOFTWAREA X:536 , C X:537binding site for residue MG X 2986
077AK5SOFTWAREG X:699 , C X:700binding site for residue MG X 2987
078AK6SOFTWAREA X:992binding site for residue MG X 2988
079AK7SOFTWAREG X:171 , A X:172 , A X:174 , C X:175binding site for residue MG X 2989
080AK8SOFTWAREU X:2471binding site for residue MG X 2990
081AK9SOFTWAREG X:1168 , C X:1169binding site for residue MG X 2991
082AL1SOFTWAREG X:2665 , U X:2666binding site for residue MG X 2992
083AL2SOFTWAREG X:579 , A X:2427 , C X:2478binding site for residue MG X 2993
084AL3SOFTWAREA X:2247 , A X:2248 , G X:2250binding site for residue MG X 2994
085AL4SOFTWAREG X:875binding site for residue MG X 2995
086AL5SOFTWAREA X:1408 , A X:1619 , C X:1620binding site for residue MG X 2996
087AL6SOFTWAREA X:1643binding site for residue MG X 2997
088AL7SOFTWAREG X:754binding site for residue MG X 2998
089AL8SOFTWAREC X:1327 , C X:1328 , G X:1345binding site for residue MG X 3000
090AL9SOFTWAREG X:2832binding site for residue MG X 3002
091AM1SOFTWAREC X:31 , C X:1214 , C X:1252binding site for residue MG X 3003
092AM2SOFTWAREA X:991 , C X:993binding site for residue MG X 3004
093AM3SOFTWAREG X:831 , G X:1201binding site for residue MG X 3005
094AM4SOFTWAREC X:1698binding site for residue MG X 3006
095AM5SOFTWAREC X:1745binding site for residue MG X 3007
096AM6SOFTWAREG X:1333binding site for residue MG X 3008
097AM7SOFTWAREA X:14 , G X:15binding site for residue MG X 3009
098AM8SOFTWAREU X:1459binding site for residue MG X 3010
099AM9SOFTWAREA X:1355 , U X:1618binding site for residue MG X 3011
100AN1SOFTWAREC X:750 , U X:1637 , G X:1638binding site for residue MG X 3013
101AN2SOFTWAREG X:2426 , A X:2427 , C X:2477 , C X:2478binding site for residue MG X 3014
102AN3SOFTWAREG X:406binding site for residue MG X 3015
103AN4SOFTWAREG X:510 , A X:512binding site for residue MG X 3016
104AN5SOFTWAREHIS A:233 , GLY A:234 , G X:2576 , A X:2577binding site for residue MG X 3017
105AN6SOFTWAREHIS B:135 , A X:1980binding site for residue MG X 3018
106AN7SOFTWARESER O:76 , G X:572binding site for residue MG X 3019
107AN8SOFTWAREILE Q:53 , C X:1411binding site for residue MG X 3020
108AN9SOFTWAREG Y:85binding site for residue MG Y 201
109AO1SOFTWAREGLY K:4 , A X:2795 , G X:2797binding site for residue MG K 201
110AO2SOFTWARELYS B:111 , HIS K:3binding site for residue MG K 202
111AO3SOFTWAREASN M:58 , G X:2699binding site for residue MG M 201

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Z:36 -Z:49

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Leu C:19 -Pro C:20
2Gly J:62 -Gly J:63
3Asn T:12 -Gly T:13

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5JVH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5JVH)

(-) Exons   (0, 0)

(no "Exon" information available for 5JVH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain 1 from PDB  Type:PROTEIN  Length:53
                                                                                      
               SCOP domains ----------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------- Pfam domains
         Sec.struct. author ........eee............eee..........eee.......eee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------- Transcript
                5jvh 1    2 AKDGPRIIVKMESSAGTGFYYTTTKNRRNTQAKLELKKYDPVAKKHVVFREKK   54
                                    11        21        31        41        51   


Chain 2 from PDB  Type:PROTEIN  Length:46
                                                                               
               SCOP domains ---------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhh.hhhhhhhhhhhhhhhhhhhhh......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------- PROSITE
                 Transcript ---------------------------------------------- Transcript
                5jvh 2    1 MKRTYQPNNRKRAKTHGFRARMKTKSGRNILARRRAKGRHQLTVSD   46
                                    10        20        30        40      


Chain 3 from PDB  Type:PROTEIN  Length:59
                                                                                            
               SCOP domains ----------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------- Pfam domains
         Sec.struct. author ..................ee............hhhhhh..ee................. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------- Transcript
                5jvh 3    6 THKMAKRRIKITGTGKVMAFKSGKRHQNTGKSGDEIRGKGKGFVLAKAEWARMKLMLPR   64
                                    15        25        35        45        55         


Chain A from PDB  Type:PROTEIN  Length:259
                                                                                                                                                                                                                                                                                                    
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............................................................eeeeeeee........eeeeee....eeeee.........eee............ee.hhh....eee.ee......eee.......eeee.....eeeee.....eeeee...eeee.................hhhhhh.....hhhhh...................................hhhh.ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh A   14 RQMTTADFSGLTKKRPEKALTEALPKTGGRNNRGRITSRFIGGGHKRLYRIIDFKRRDKSGVNAKVAAIEYDPNRSARIALLHYADGEKRYILAPEGLTVGATVNAGPEAEPKLGNALPLRFVPVGAVVHALELVPGKGAQLARSAGTSVQVQGKESDYVIVRLPSGELRRVHSECYATIGAVGNAEHKNIVLGKAGRSRWLGRKPHQRGSAMNPVDHPHGGGEGRTGAGRVPVTPWGKPTKGLKTRRKRKTSDRFIVT  272
                                    23        33        43        53        63        73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263         


Chain B from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                              
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeeeeeeee..eeeeeeeee.....eeeeehhhhhh..eeeee....hhhhhhhhhhhhhhhhh......eeeee....................eeeee....eeehhhhhhh....................................eee...eeee....eeeee....eeeee.........eeeee...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh B    1 MKGILGTKIGMTQIWKNDRAIPVTVVLAGPCPIVQRKTAQTDGYEAVQIGYAPKAERKVNKPMQGHFAKAGVAPTRILREFRGFAPDGDSVNVDIFAEGEKIDATGTSKGKGTQGVMKRWNFAGGPASHGSKKWHRRPGSIGQRKTPGRVYKGKRMAGHMGMERVTVQNLEVVEIRAGENLILVKGAIPGANGGLVVLRSAAKAS  205
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200     


Chain C from PDB  Type:PROTEIN  Length:194
                                                                                                                                                                                                                                   
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....................hhhhhhhhhhhhhhhhh........hhhhh...........................................hhhhhhhhhhhhhhhh.........hhhhhh...hhhhhhhhhhh.......eeeee.hhhhhh........eeee....hhhhhhhh.eee........ Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh C    2 AQINVIGQNGGRTIELPLPEVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKPRSYDYTLPRQVRQLGLAMAIASRQEGGKLVAVDGFDIADAKTKNFISWAKQNGLDGTEKVLLVTDDENTRRAARNVSWVSVLPVAGVNVYDILRHDRLVIDAAALEI  195
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191    


Chain D from PDB  Type:PROTEIN  Length:177
                                                                                                                                                                                                                  
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhh............eeeeeeeee........hhhhhhhhhhhhhh....ee..................eeeeee.hhhhhhhhhhhhhh.....................eee......................eeeeee...hhhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh D    3 QLKTKYNDQVRPALMQQFGYSSVMAVPRIEKIVVNEGLGSSKEDSKAIDKAAKELALITLQKPIITKAKKSISNFKLRQGMPVGIKVTLRGERMYVFLEKLINIGLPRIRDFRGINPNAFDGRGNYNLGIKEQLIFPEITYDMVDKTRGMDITIVTTAKTDEEARALLQSMGLPFRK  179
                                    12        22        32        42        52        62        72        82        92       102       112       122       132       142       152       162       172       


Chain E from PDB  Type:PROTEIN  Length:171
                                                                                                                                                                                                            
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee..eeeee.....ee.......eee......eee........hhhhhhhhhhhhhhhhhhhh.eeeeeeee....eeeee..eeeee......eee.....eeeeeee..eeeeee.hhhhhhhhhhhhhhhh........eeee........... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh E    5 GKQPIAVPSGVTVNAQDGVFKVKGPKGELTVPYNTELTVRQDGDQLLVERPSDAQKHRALHGLTRTLVANAVKGVSDGYTINLELRGVGFRAKLTGKALEMNIGYSHPVIIEPPAGVTFAVPEPTRIDVSGIDKQLVGQVAANVRKVRKPDAYHGKGVRFVGEQIALKAGK  175
                                    14        24        34        44        54        64        74        84        94       104       114       124       134       144       154       164       174 


Chain G from PDB  Type:PROTEIN  Length:142
                                                                                                                                                                               
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eeeee....hhhhhhhhhhhhhhh..............eeeee...............eee...........eeehhhhh..hhhhhhhhhhh....hhhhhhhh..eee....hhhhhhh.......... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh G   30 KTYIPKNDEQNWVVVDASGVPLGRLATLIASRIRGKHRPDFTPNMIQGDFVVVINAAQVALTGKKLDDKVYTRYTGYQGGLKTETAREALSKHPERVIEHAVFGMLPKGRQGRAMHTRLKVYAGETHPHSAQKPQVLKTQPL  171
                                    39        49        59        69        79        89        99       109       119       129       139       149       159       169  


Chain H from PDB  Type:PROTEIN  Length:134
                                                                                                                                                                       
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......eeee.....eeeeeeeee.........................eeeeeeeee..........eeeeeeee....ee.....eeee...eeee.................hhhhhh.hhhhhh...... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh H    1 MIMPQSRLDVADNSGAREIMCIRVLNSGIGGKGLTTGGGGNKRYAHVGDIIVASVKDAAPRGAVKAGDVVKAVVVRTSHAIKRADGSTIRFDRNAAVIINNQGEPRGTRVFGPVARELRDRRFMKIVSLAPEVL  134
                                    10        20        30        40        50        60        70        80        90       100       110       120       130    


Chain I from PDB  Type:PROTEIN  Length:134
                                                                                                                                                                       
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............................................................eeeehhhhh..........hhhhhhh.......eeee........eeee..eehhhhhhhhhh..eeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh I   11 GSRKDRKRVGRGPGGTDKTAGRGHKGQKSRSGAGKGAFFEGGRSRLIARLPKRGFNNVGTTYEVVKLSQLQDLEDTTFDRDTLEAYRLVRRKNRPVKLLASGEISRAVTVHVDAASAAAIKAVEAAGGRVVLPE  144
                                    20        30        40        50        60        70        80        90       100       110       120       130       140    


Chain J from PDB  Type:PROTEIN  Length:136
                                                                                                                                                                         
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........................eeeee...eee....hhhhhhhhhhhh....eeee......ee.................ee.eee....eeeeee..hhhhhhhhhhhhhh.....eeee........ Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh J    6 KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKSNQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMGKGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHKLPIQTKMVKREVYDEA  141
                                    15        25        35        45        55        65        75        85        95       105       115       125       135      


Chain K from PDB  Type:PROTEIN  Length:113
                                                                                                                                                  
               SCOP domains ----------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........hhhhhhhhhhhhhhhhhhheeeeehhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhh.....eeeeee........eeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------- Transcript
                5jvh K    3 HGKAGRKLNRNSSARVALARAQATALLREGRIQTTLTKAKELRPFVEQLITTAKGGDLHSRRLVAQDIHDKDVVRKVMDEVAPKYAERPGGYTRILRVGTRRGDGVTMALIEL  115
                                    12        22        32        42        52        62        72        82        92       102       112   


Chain L from PDB  Type:PROTEIN  Length:104
                                                                                                                                         
               SCOP domains -------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhh........ee............ee......................hhhhhhhhhhhhhhhhhh....ee.......hhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------- Transcript
                5jvh L    8 RRKLRTRRKVRTTTAASGRLRLSVYRSSKHIYAQIIDDSRGQTLAAASSAALKSGNKTDTAAAVGKALAAAAAEKGIKQVVFDRGSYKYHGRVKALADAAREGG  111
                                    17        27        37        47        57        67        77        87        97       107    


Chain M from PDB  Type:PROTEIN  Length:108
                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ......hhhhhhhhhhh............eeeeeeee.......eeeeeeeeeee........eeeeeeee..eeeeeeee.....eeeeee..........hhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------ Transcript
                5jvh M    2 QTHIKINRGELLRGIEQDHTRQLPDFRPGDTVRVDTKVREGNRTRSQAFEGVVIAINGSGSRKSFTVRKISFGEGVERVFPFASPLVNQVTIVERGKVRRAKLYYLRE  109
                                    11        21        31        41        51        61        71        81        91       101        


Chain N from PDB  Type:PROTEIN  Length:117
                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh N    2 PRAKTGIVRRRRHKKVLKRAKGFWGSRSKQYRNAFQTLLNAATYEYRDRRNKKRDFRRLWIQRINAGARLHGMNYSTFINGLKRANIDLNRKVLADIAAREPEAFKALVDASRNARQ  118
                                    11        21        31        41        51        61        71        81        91       101       111       


Chain O from PDB  Type:PROTEIN  Length:94
                                                                                                                               
               SCOP domains ---------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .............eeee..........eeee..eehhhhh.ee.......eeeeeeeeee....eeeeee......eeeeee...eeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------- Transcript
                5jvh O    5 IQTGGKQYRVSEGDVIRVESLQGEAGDKVELKALFVGGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGI   98
                                    14        24        34        44        54        64        74        84        94    


Chain P from PDB  Type:PROTEIN  Length:127
                                                                                                                                                                
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhh......eeeeeee..hhhhhhhhhhhhh..hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh...hhh.eeeeeeeeeeeeeeeeeee.hhh.eeeeeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh P    8 FRNKKQRKQQVKLRKPGFAVAKYVRMSPRKVRLVVDVIRGKSVQDAEDLLRFIPRSASEPVAKVLNSAKANALHNDEMLEDRLFVKEAYVDAGPTLKRLIPRARGSANIIKKRTSHITIIVAEKGNK  134
                                    17        27        37        47        57        67        77        87        97       107       117       127       


Chain Q from PDB  Type:PROTEIN  Length:93
                                                                                                                              
               SCOP domains --------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeee..hhhhhhhhh..eeeeee....hhhhhhhhhh......eeeeeeeee................eeeeeeee.......hhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------- Transcript
                5jvh Q    2 SHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDAIQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVRLAEGQSIEALAGQ   94
                                    11        21        31        41        51        61        71        81        91   


Chain R from PDB  Type:PROTEIN  Length:110
                                                                                                                                               
               SCOP domains -------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................eee.........eeeeeeeehhheeeee......eee..........eee........................................... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------- Transcript
                5jvh R    4 PSAGSHHNDKLHFKKGDTVIVLSGKHKGQTGKVLLALPRDQKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVALVDPETGKATRVRKQIVDGKKVRVAVASGKT  113
                                    13        23        33        43        53        63        73        83        93       103       113


Chain S from PDB  Type:PROTEIN  Length:179
                                                                                                                                                                                                                    
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee..............eeeeeee....eeeeeeehhhhhhhhhhhh...eeeeee...eeeeeeeee.............eee...........................eeee..............................ee.....................eeee....... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5jvh S    1 MELTAKPRTPKQKLDESMIAAVAYNKENNVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPPRLTAE  179
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170         


Chain T from PDB  Type:PROTEIN  Length:74
                                                                                                           
               SCOP domains -------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .................ee...............ee...eeee..eeeee....eeeeeee...eeeeeee... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------- Transcript
                5jvh T   12 NGRDSNPKYLGVKKFGGEVVKAGNILVRQRGTKFKAGQGVGMGRDHTLFALSDGKVVFINKGKGARFISIEAAQ   85
                                    21        31        41        51        61        71        81    


Chain U from PDB  Type:PROTEIN  Length:72
                                                                                                         
               SCOP domains ------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ...........ee..ee...........ee...ee....................hhhhhhhhhhh...... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------ Transcript
                5jvh U    8 TGKKNLVVNSVIRRGKARADGGVGRKTTGITKRVQRANLHKKAIRENGQVKTVWLSANALRTLSKGPYKGIE   79
                                    17        27        37        47        57        67        77  


Chain V from PDB  Type:PROTEIN  Length:65
                                                                                                  
               SCOP domains ----------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------- Transcript
                5jvh V    2 KPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQPHRVRQLRREVAQLNTVKAELARKGEQ   66
                                    11        21        31        41        51        61     


Chain W from PDB  Type:PROTEIN  Length:55
                                                                                        
               SCOP domains ------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------- Pfam domains
         Sec.struct. author .eeee.......hhhhhhhhhhh.......eee...hhhhhhhhhhh...eee.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------- Transcript
                5jvh W    1 MKIKLVRSVIGRPGNQVKTVQALGLRKIGDSREVSDTPAVRGMVKTVKHLLEVQE   55
                                    10        20        30        40        50     


Chain X from PDB  Type:RNA  Length:2658
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   
                5jvh X    1 GGUCAAGAUAGUAAGGGUCCACGGUGGAUGCCCUGGCGCUGGAGCCGAUGAAGGACGCGAUUACCUGCGAAAAGCCCCGACGAGCUGGAGAUACGCUUUGACUCGGGGAUGUCCGAAUGGGGAAACCCACCUCGUAAGAGGUAUCCGCAAGGAUGGGAACUCAGGGAACUGAAACAUCUCAGUACCUGAAGGAGAAGAAAGAGAAUUCGAUUCCGUUAGUAGCGGCGAGCGAACCCGGAUCAGCCCAAACUCAAGCCGAAGUGGCUGGAAAGCUACACCUCAGAAGGUGAGAGUCCUGUAGGCGAACGAGCUAGGUCGUUGUUCGUGAAACGAUGACUGAAUCCGCGCGGACCACCGCGCAAGGCUAAAUACUCCCAGUGACCGAUAGCGCAUAGUACCGUGAGGGAAAGGUGAAAAGAACCCCGGGAGGGGAGUGAAAGAGAACCUGAAACCGUGGACUUACAAGCAGUCAUGGCACCUUAUGCGUGUUAUGGCGUGCCUAUUGAAGCAUGAGCCGGCGACUUAGACCUGACGUGCGAGCUUAAGUUGAAAAACGGAGGCGGAGCGAAAGCGAGUCCGAAUAGGGCGGCAUUAGUACGUCGGGCUAGACUCGAAACCAGGUGAGCUAAGCAUGACCAGGUUGAAACCCCCGUGACAGGGGGCGGAGGACCGAACCGGUGCCUGCUGAAACAGUCUCGGAUGAGUUGUGUUUAGGAGUGAAAAGCUAACCGAACCUGGAGAUAGCUAGUUCUCCCCGAAAUGUAUUGAGGUACAGCCUCGGAUGUUGACCAUGUCCUGUAGAGCACUCACAAGGCUAAACCUUAUGAAACUCCGAAGGGGCACGCGUUUAGUCCGGGAGUGAGGCUGCGAGAGCUAACUUCCGUAGCCGAGAGGGAAACAACCCAGACCAUCAGCUAAGGUCCCUAAAUGAUCGCUCAGUGGUUAAGGAUGUGUCGUCGCAUAGACAGCUGGCUUAGAAGCAUGCGUAAUAGCUCACUGGUCGAGUGACGAUGCGCCGAAAAUGAUCGGGGCUCAAGUGAUCUACCGAAGCUAUGGAUUCAACUCGCGAAGCGAGUUGUCUGGUAGGGGAGCGUUCAGUCCGCGGAGAAGCCAUACCGGAAGGAGUGGUGGAGCCGACUGAAGUGCGGAUGCCGGCAUGAGUAACGAUAAAAGAAGUGAGAAUCUUCUUCGCCGUAAGGACAAGGGUUCCUGGGGAAGGGUCGUCCGCCCAGGGAAAGUCGGGACCUAAGGUGAGGCCGAACGGCGCAGCCGAUGGACAGCAGGUCAAGAUUCCUGCACCGAUCAUGUGGAGUGAUGGAGGGACGCAUUACGCUAUCCAAUGCCAAGCUAUGGCUAUGCUGGUUGGUACGCUCAAGGGCGAUCGGGUCAGAAAAUCUACCGGUCACAUGCCUCAGACGUAUCGGGAGCUUCCUCGGAAGCGAAGUUGGAAACGCGACGGUGCCAAGAAAAGCUUCUAAACGUUGAAACAUGAUUGCCCGUACCGCAAACCGACACAGGUGUCCGAGUGUCAAUGCACUAAGGCGCGCGAGAGAACCCUCGUUAAGGAACUUUGCAAUCUCACCCCGUAACUUCGGAAGAAGGGGUCCCCACGCUUCGCGUGGGGCGCAGUGAAUAGGCCCAGGCGACUGUUUACCAAAAUCACAGCACUCUGCCAACACGAACAGUGGACGUAUAGGGUGUGACGCCUGCCCGGUGCCGGAAGGUCAAGUGGAGCGGUGCAAGCUGCGAAAUGAAGCCCCGGUGAACGGCUAAGGUAGCGAAAUUCCUUGUCGGGUAAGUUCCGACCUGCACGAAAGGCGUAACGAUCUGGGCGCUGUCUCAACGAGGGACUCGGUGAAAUUGAAUUGGCUGUAAAGAUGCGGCCUACCCGUAGCAGGACGAAAAGACCCCGUGGAGCUUUACUAUAGUCUGGCAUUGGGAUUCGGGUUUCUGAAACUUGGAUUUCUAACCUGAAAAAUCACUUUCGGGGACCGUGCUUGGCGGGUAGUUUGACUGGGGCGGUCGCCUCCCAAAAUGUAACGGAGGCGCCCAAAGGUCACCUCAAGACGGUUGGAAAUCGUCUGUAGAGCGCAAAGGUAGAAGGUGGCUUGACUGCGAGACUGACACGUCGAGCAGGGAGGAAACUCGGGCUUAGUGAACCGGUGGUACCGUGUGGAAGGGCCAUCGAUCAACGGAUAAAAGUUACCCCGGGGAUAACAGGCUGAUCUCCCCCGAGAGUCCAUAUCGGCGGGGAGGUUUGGCACCUCGAUGUCGGCUCGUCGCAUCCUGGGGCUGAAGAAGGUCCCAAGGGUUGGGCUGUUCGCCCAUUAAAGCGGCACGCGAGCUGGGUUCAGAACGUCGUGAGACAGUUCGGUCUCUAUCCGCUACGGGCGCAGGAGAAUUGAGGGGAGUUGCUCCUAGUACGAGAGGACCGGAGUGAACGGACCGCUGGUCUCCCUGCUGUCGUACCAACGGCACAUGCAGGGUAGCUAUGUCCGGAACGGAUAACCGCUGAAAGCAUCUAAGCGGGAAGCCAGCCCCAAGAUGAGUUCUCCCACUGAGGUAAGACUCCCGGAAGACCACCGGGUUAAGAGGCCAGGCGUGCACGCAUAGCAAUGUGUUCAGCGGACUGGUGCUCAUCAGUCGAGGUCUUGACCA 2877
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       301       311       321       331       341       351       361||     394       404       414       424       434       444       454       464       474       484       494       504       514       524       534       544       554       564       574       584       594       604       614       624       634       644       654       664       674       684       694       704       714       724       734       744       754       764       774       784       794       804       814       824       834       844       854       864       874       884     ||914       924       934       944       954       964       974       984       994      1004      1014      1024      1034      1044      1054      1072      1082 ||   1108      1118      1128      1138      1148      1158      1168      1178      1188      1198      1208      1218      1228      1238      1248      1258      1268      1278      1288      1298      1308      1318      1328      1338      1348      1358      1368      1378      1388      1398      1408      1418      1428      1438      1448      1458      1468      1478      1488      1498      1508      1518      1528      1538      1548      1558      1568      1578      1588      1598      1608      1618      1628      1638      1648      1658      1668      1678      1688      1698      1708      1718      1728      1738      1748      1758      1768      1778      1788      1798      1808      1818      1828      1838      1848      1858      1868      1878      1888|     1918      1928      1938      1948      1958      1968      1978      1988      1998      2008      2018      2028      2038      2048      2058      2068      2078      2088 ||   2173      2183      2193      2203      2213      2223      2233      2243      2253      2263      2273      2283      2293      2303      2313      2323      2333      2343      2353      2363      2373      2383      2393      2403      2413      2423      2433      2443      2453      2463      2473      2483      2493      2503      2513      2523      2533      2543      2553      2563      2573      2583      2593      2603      2613      2623      2633      2643      2653      2663      2673      2683      2693      2703      2713      2723      2733      2743      2753      2763      2773|     2789      2799      2809      2819      2829      2839      2849      2859      2869        
                                                                                                                                                                                                                                                                                  249|                                                          362|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     890|                                                                                                                                                    1063|        1084|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               1888|                                                                                                                                                                                 2090|                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           2773|                                                                                                 
                                                                                                                                                                                                                                                                                   301                                                           386                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      911                                                                                                                                                     1072         1101                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                1909                                                                                                                                                                                  2166                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            2780                                                                                                 


Chain Y from PDB  Type:RNA  Length:120
                                                                                                                                                         
                5jvh Y    3 ACCCCCGUGCCCAUAGCACUGUGGAACCACCCCACCCCAUGCCGAACUGGGUCGUGAAACACAGCAGCGCCAAUGAUACUCGGACCGCAGGGUCCCGGAAAAGUCGGUCAGCGCGGGGGU  122
                                    12        22        32        42        52        62        72        82        92       102       112       122


Chain Z from PDB  Type:PROTEIN  Length:57
                                                                                          
               SCOP domains --------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhh.......ee......ee................... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------- Transcript
                5jvh Z    3 KHPVPKKKTSKSKRDMRRSHHALTAPNLTECPQCHGKKLSHHICPNCGYYDGRQVLA   59
                                    12        22        32        42        52
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JVH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JVH)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5JVH)

(-) Gene Ontology  (19, 216)

Asymmetric/Biological Unit(hide GO term definitions)

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  5jvh
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  RL29_DEIRA | Q9RXJ4
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  RL32_DEIRA | P49228
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RL13_DEIRA | Q9RXY1: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL14_DEIRA | Q9RXJ2: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL15_DEIRA | Q9RSK9: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL16_DEIRA | Q9RXJ5: 1gs2 1njm 1njp 1nkw 1nwx 1nwy 1sm1 1xbp 1y69 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL17_DEIRA | Q9RSJ5: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL18_DEIRA | Q9RSL2: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL19_DEIRA | Q9RWB4: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL20_DEIRA | Q9RSW7: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4t 4wfn 5dm6 5dm7 5jvg
        RL21_DEIRA | Q9RY64: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4t 4wfn 5dm6 5dm7 5jvg
        RL22_DEIRA | Q9RXJ7: 1j5a 1jzx 1jzy 1jzz 1k01 1nkw 1nwx 1nwy 1ond 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL23_DEIRA | Q9RXK0: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2aar 2d3o 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL24_DEIRA | Q9RXJ1: 1gs2 1nkw 1nwx 1nwy 1sm1 1xbp 2d3o 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL25_DEIRA | Q9RX88: 1njm 1njp 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4p 4v4r 4v4s 4v4t 4wfn 5dm6 5dm7 5jvg
        RL27_DEIRA | Q9RY65: 1nkw 1nwx 1nwy 1sm1 1xbp 1y69 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4t 4wfn 5dm6 5dm7 5jvg
        RL28_DEIRA | Q9RRG8: 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4wfn 5dm6 5dm7 5jvg
        RL29_DEIRA | Q9RXJ4: 1nkw 1nwx 1nwy 1sm1 1xbp 2aar 2d3o 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL2_DEIRA | Q9RXJ9: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL30_DEIRA | Q9RSL0: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL32_DEIRA | P49228: 1j5a 1jzx 1jzy 1jzz 1k01 1nkw 1nwx 1nwy 1ond 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4t 4wfn 5dm6 5dm7 5jvg
        RL33_DEIRA | Q9RSS4: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4r 4v4s 4v4t 4wfn 5dm6 5dm7 5jvg
        RL34_DEIRA | Q9RSH2: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4p 4v4r 4v4s 4v4t 4wfn 5dm6 5dm7 5jvg
        RL35_DEIRA | Q9RSW6: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4v4t 4wfn 5dm6 5dm7 5jvg
        RL3_DEIRA | Q9RXK2: 1nkw 1nwx 1nwy 1sm1 1xbp 2ogm 2ogn 2ogo 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL4_DEIRA | Q9RXK1: 1j5a 1jzx 1jzy 1jzz 1k01 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4wfn 5dm6 5dm7 5jvg
        RL5_DEIRA | Q9RXJ0: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg
        RL6_DEIRA | Q9RSL3: 1nkw 1nwx 1nwy 1sm1 1xbp 2zjp 2zjq 2zjr 3cf5 3dll 3pio 3pip 4io9 4ioa 4ioc 4u67 4v49 4v4a 4v4g 4wfn 5dm6 5dm7 5jvg

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5JVH)