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(-) Description

Title :  NITN AMIDASE FROM NETERENKONIA SP. AN1 AFTER THROMBIN HIS-TAG REMOVAL.
 
Authors :  B. T. Sewell, S. W. Kimani, B. W. Weber
Date :  05 May 16  (Deposition) - 18 May 16  (Release) - 18 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.19
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Nitn Amidase, Neterenkonia Sp. An1, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. T. Sewell, S. W. Kimani, G. A. Venter, R. Hunter, D. T. Schell
Qm/Mm Modelling Of Substrate Binding In The Amidase Active Site
To Be Published
PubMed: search
(for further references see the PDB file header)

(-) Compounds

Molecule 1 - ALIPHATIC AMIDASE
    Chains: A
    EC Number: 3.5.1.4
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Taxid: 469008
    Gene: NIT2
    Mutation: YES
    Organism Scientific: NESTERENKONIA SP. AN1
    Organism Taxid: 652017

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric Unit (1, 1)
No.NameCountTypeFull Name
1CSD1Mod. Amino Acid3-SULFINOALANINE
Biological Unit 1 (1, 2)
No.NameCountTypeFull Name
1CSD2Mod. Amino Acid3-SULFINOALANINE

(-) Sites  (0, 0)

(no "Site" information available for 5JQN)

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5JQN)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:255
                                                                                                                                                                                                                                                                                               
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeee......hhhhhhhhhhhhhhhhhhh...eee...hhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhh.eeee.............eeeee.....eeeeee....hhhhhhhhh........eeee..eeeee.hhhhhhhhhhhhhhhhh...eeeee.......hhhhhhhhhhhhhhhh.eeeee..eeee..eeee...eee.....eeee.....eeeeeee...hhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5jqn A   0 HMRIALMQHTARPLDPQHNLDLIDDAAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDRGIALVWSLPGPEGPEQRGITAELADEHGEVLASYQKVQLYGPEEKAAFVPGEQPPPVLSWGGRQLSLLVcYDVEFPEMVRAAAARGAQLVLVPTALAGDETSVPGILLPARAVENGITLAYANHCGPEGGLVFDGGSVVVGPAGQPLGELGVEPGLLVVDLPDADYLQDRRAELHRNWL 263
                                     9        19        29        39        49        59        69        79        89        99       109       119       129       139     | 149       159       169       179       189       199       209       219       229       248       258     
                                                                                                                                                                           145-CSD                                                                                      238|               
                                                                                                                                                                                                                                                                         248
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5JQN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5JQN)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (4, 4)

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