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(-) Description

Title :  REPOMAN-PP1G (PROTEIN PHOSPHATASE 1, GAMMA ISOFORM) HOLOENZYME COMPLEX
 
Authors :  G. S. Kumar, W. Peti, R. Page
Date :  07 Mar 16  (Deposition) - 05 Oct 16  (Release) - 12 Oct 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.30
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Pp1 Gamma; Repoman, Ki-67; Phosphatase, Hydrolase-Protein Binding Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  G. S. Kumar, E. Gokhan, S. De Munter, M. Bollen, P. Vagnarelli, W. Peti R. Page
The Ki-67 And Repoman Mitotic Phosphatases Assemble Via An Identical, Yet Novel Mechanism.
Elife V. 5 2016
PubMed-ID: 27572260  |  Reference-DOI: 10.7554/ELIFE.16539

(-) Compounds

Molecule 1 - SERINE/THREONINE-PROTEIN PHOSPHATASE PP1-GAMMA CATALYTIC SUBUNIT
    Chains: A
    EC Number: 3.1.3.16
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: RP1B
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 7-308
    Gene: PPP1CC
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: PP-1G,PROTEIN PHOSPHATASE 1C CATALYTIC SUBUNIT
 
Molecule 2 - CELL DIVISION CYCLE-ASSOCIATED PROTEIN 2
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PETM30-MBP
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Fragment: PP1 BINDING DOMAIN (UNP RESIDUES 383-423)
    Gene: CDCA2
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: RECRUITS PP1 ONTO MITOTIC CHROMATIN AT ANAPHASE PROTEIN, REPO-MAN

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 8)

Asymmetric/Biological Unit (3, 8)
No.NameCountTypeFull Name
1GOL6Ligand/IonGLYCEROL
2MLI1Ligand/IonMALONATE ION
3NA1Ligand/IonSODIUM ION

(-) Sites  (8, 8)

Asymmetric Unit (8, 8)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREASP A:64 , HIS A:66 , ASP A:92 , GLU A:218 , ASP A:220 , ARG A:221 , HIS A:248 , TYR A:272 , GOL A:402 , HOH A:538 , HOH A:542 , HOH A:614binding site for residue MLI A 401
2AC2SOFTWAREGLU A:218 , ASN A:219 , ASP A:220 , GLN A:249 , VAL A:250 , MLI A:401 , HOH A:513 , HOH A:598 , HOH A:630binding site for residue GOL A 402
3AC3SOFTWAREGLN A:185 , ARG A:188 , SER A:224 , PHE A:225 , HOH A:505 , HOH A:516 , HOH A:520binding site for residue GOL A 403
4AC4SOFTWARECYS A:127 , SER A:129 , VAL A:195 , PRO A:196 , ASP A:197 , CYS A:202 , TRP A:206 , HOH A:649binding site for residue GOL A 404
5AC5SOFTWAREPRO A:50 , LEU A:53 , GLU A:54 , GLU A:116 , PHE A:119 , LYS A:141 , HOH A:621 , HOH A:653 , HOH A:674binding site for residue GOL A 405
6AC6SOFTWAREPRO A:58 , LEU A:59 , LYS A:60 , SER A:85 , ASN A:86 , SER A:284 , VAL A:285 , HOH A:528binding site for residue GOL A 406
7AC7SOFTWAREPRO A:209 , GLN A:249 , VAL A:251 , GLU A:256 , HOH A:515 , HOH A:552 , HOH A:577 , HOH A:592binding site for residue GOL A 407
8AC8SOFTWAREGLU A:54 , ILE A:164 , GLU A:167 , HOH A:721binding site for residue NA A 408

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5INB)

(-) Cis Peptide Bonds  (3, 3)

Asymmetric/Biological Unit
No.Residues
1Ala A:57 -Pro A:58
2Pro A:82 -Pro A:83
3Arg A:191 -Pro A:192

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5INB)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5INB)

(-) Exons   (0, 0)

(no "Exon" information available for 5INB)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:293
                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhh........hhhhhhhhhhhhhhhhhhh..eeee...eeee.....hhhhhhhhhhhhh......eee.........hhhhhhhhhhhhhhhh...eee......hhhhhh..hhhhhhhhhhhhhhhhhhhhhhh....eeee...eeee.........hhhhhhh..........hhhhhhhhhee......eee......eeehhhhhhhhhhhhh..eeee........eeee....eeee....hhhhh....eeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5inb A   7 LNIDSIIQRLLEVRGSKPGKNVQLQENEIRGLCLKSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLPIAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA 299
                                    16        26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276       286       296   


Chain B from PDB  Type:PROTEIN  Length:33
                                                                 
               SCOP domains --------------------------------- SCOP domains
               CATH domains --------------------------------- CATH domains
               Pfam domains --------------------------------- Pfam domains
         Sec.struct. author ....ee......eee.................. Sec.struct. author
                 SAPs(SNPs) --------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------- PROSITE
                 Transcript --------------------------------- Transcript
                 5inb B 390 RKRVTFGEDLSPEVFDESLPANTPLRKGGTPVC 422
                                   399       409       419
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5INB)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5INB)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5INB)

(-) Gene Ontology  (48, 54)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Ala A:57 - Pro A:58   [ RasMol ]  
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  PP1G_HUMAN | P36873
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        CDCA2_HUMAN | Q69YH5: 5ioh 5sw9
        PP1G_HUMAN | P36873: 1it6 1jk7 1u32 2bcd 2bdx 4ut2 4ut3 5j28

(-) Related Entries Specified in the PDB File

5ioh 5IOH CONTAINS PP1 ALPHA ISOFORM:REPOMAN COMPLEX RELATED ID: 25981 RELATED DB: BMRB 25981 CONTAINS NMR CHEMICAL SHIFT ASSIGNMENTS OF REPOMAN PP1 BINDING DOMAIN
5j28