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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SECOND BROMODOMAIN OF HUMAN TAF1L IN COMPLEX WITH BROMOSPORINE (BSP)
 
Authors :  P. Filippakopoulos, S. Picaud, I. Felletar, T. Krojer, C. Tallant, F. V A. M. Edwards, C. H. Arrowsmith, C. Bountra, S. Knapp, Structural Gen Consortium (Sgc)
Date :  28 Feb 16  (Deposition) - 19 Oct 16  (Release) - 02 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.10
Chains :  Asym./Biol. Unit :  A
Keywords :  Transcription, Taf1/Tafii250, Structural Genomics, Structural Genomics Consortium, Sgc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Picaud, K. Leonards, J. P. Lambert, O. Dovey, C. Wells, O. Fedorov, O. Monteiro, T. Fujisawa, C. Y. Wang, H. Lingard, C. Tallant, N. Nikbin L. Guetzoyan, R. Ingham, S. V. Ley, P. Brennan, S. Muller, A. Samsonova A. C. Gingras, J. Schwaller, G. Vassiliou, S. Knapp, P. Filippakopoulos
Promiscuous Targeting Of Bromodomains By Bromosporine Identifies Bet Proteins As Master Regulators Of Primary Transcription Response In Leukemia.
Sci Adv V. 2 00760 2016
PubMed-ID: 27757418  |  Reference-DOI: 10.1126/SCIADV.1600760

(-) Compounds

Molecule 1 - TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 1-LIKE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TAF1L
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: TAF(II)210,TBP-ASSOCIATED FACTOR 1-LIKE,TBP-ASSOCIATED FACTOR 210 KDA,TRANSCRIPTION INITIATION FACTOR TFIID 210 KDA SUBUNIT

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
1BMF1Ligand/IonBROMOSPORINE

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETRP A:1545 , PRO A:1546 , PHE A:1547 , HIS A:1549 , PRO A:1550 , VAL A:1551 , ASN A:1552 , TYR A:1601 , ASN A:1602 , TYR A:1608 , HOH A:1801 , HOH A:1815binding site for residue BMF A 1701

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:1638 -A:1638

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5IGL)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5IGL)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5IGL)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:139
                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhhhhhhhh......hhhhhh........hhhhhh....hhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5igl A 1512 LGTENLYFQSMQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQTITEYDEHLTQLEKDICTAKEAALEEAEL 1650
                                  1521      1531      1541      1551      1561      1571      1581      1591      1601      1611      1621      1631      1641
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5IGL)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5IGL)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5IGL)

(-) Gene Ontology  (22, 22)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        TAF1L_HUMAN | Q8IZX4: 3hmh

(-) Related Entries Specified in the PDB File

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