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(-) Description

Title :  CRYSTAL STRUCTURE OF THE SET DOMAIN OF THE HUMAN MLL5 METHYLTRANSFERASE
 
Authors :  A. Le Maire, S. Mas-Y-Mas, C. Dumas, A. Lebedev
Date :  26 Jan 16  (Deposition) - 16 Nov 16  (Release) - 16 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.09
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Set Domain, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Mas-Y-Mas, M. Barbon, C. Teyssier, H. Demene, J. E. Carvalho, L. E. Bird, A. Lebedev, J. Fattori, M. Schubert, C. Dumas, W. Bourguet, A. Le Maire
The Human Mixed Lineage Leukemia 5 (Mll5), A Sequentially And Structurally Divergent Set Domain-Containing Protein With No Intrinsic Catalytic Activity.
Plos One V. 11 65139 2016
PubMed-ID: 27812132  |  Reference-DOI: 10.1371/JOURNAL.PONE.0165139

(-) Compounds

Molecule 1 - HISTONE-LYSINE N-METHYLTRANSFERASE 2E
    Chains: A, B
    EC Number: 2.1.1.43
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 323-458
    Gene: KMT2E, MLL5
    Mutation: YES
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: LYSINE N-METHYLTRANSFERASE 2E,MYELOID/LYMPHOID OR MIXED- LINEAGE LEUKEMIA PROTEIN 5

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5HT6)

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

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SAPs(SNPs) PROSITE motifs Exons
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Chain A from PDB  Type:PROTEIN  Length:123
                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .ee......ee........eeee...eeeehhhhhhh..........eeee.......eeee.....hhhhhhee.....eeeeeeee..eeeeeeee..........ee............. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ht6 A  24 LFKPPKKILKSAKDLPPDALIIEYRGKFMLREQFEANGYFFKRPYPFVLFYSKFHGLEMCVDARTFGNEARFIRRSCTPNAEVRHEIQDGTIHLYIYSIHSIPKGTEITIAFDFDYGNAKYKV 154
                                ||  41        51        61        71        81        91       101       111       121       131       141       151   
                               28|                                                                                                                     
                                37                                                                                                                     


Chain B from PDB  Type:PROTEIN  Length:109
                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..............eeee...eeeehhhhhhh..........eeee.......eeee.....hhhhhhee.....eeeeeeee..eeeeeeee..........ee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------- Transcript
                 5ht6 B  37 KKILKSAKDLPPDALIIEYRGKFMLREQFEANGYFFKRPYPFVLFYSKFHGLEMCVDARTFGNEARFIRRSCTPNAEVRHEIQDGTIHLYIYSIHSIPKGTEITIAFDF 145
                                    46        56        66        76        86        96       106       116       126       136
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HT6)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HT6)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (32, 32)

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        KMT2E_HUMAN | Q8IZD2: 2lv9 4l58

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