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(-) Description

Title :  CRYSTAL STRUCTURE OF ABC TRANSPORTER SOLUTE BINDING PROTEIN B1G1H7 FROM BURKHOLDERIA GRAMINIS C4D1M, TARGET EFI-511179, IN COMPLEX WITH D-ARABINOSE
 
Authors :  Y. Roth, M. W. Vetting, N. F. Al Obaidi, R. Toro, L. L. Morisco, J. Benach S. R. Wasserman, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative
Date :  21 Jan 16  (Deposition) - 02 Mar 16  (Release) - 02 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.55
Chains :  Asym./Biol. Unit :  A
Keywords :  Abc Transporter Solute Binding Protein, Enzyme Function Initiative, Efi, Structural Genomics, Solute-Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  Y. Roth, M. W. Vetting, N. F. Al Obaidi, R. Toro, L. L. Morisco, J. Benach, J. Koss, S. R. Wasserman, J. A. Gerlt, S. C. Almo, Enzyme Function Initiative (Efi)
Crystal Structure Of Abc Transporter Solute Binding Protein B1G1H7 From Burkholderia Graminis C4D1M, Target Efi-511179, In Complex With D-Arabinose
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - PERIPLASMIC BINDING PROTEIN/LACI TRANSCRIPTIONAL REGULATOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: BGRAMDRAFT_3172
    Organism Scientific: BURKHOLDERIA GRAMINIS C4D1M
    Organism Taxid: 396598
    Strain: C4D1M

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (3, 11)

Asymmetric/Biological Unit (3, 11)
No.NameCountTypeFull Name
164K1Ligand/IonALPHA-D-ARABINOPYRANOSE
2CL1Ligand/IonCHLORIDE ION
3MSE9Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARELYS A:38 , ASP A:118 , ASN A:166 , ARG A:170 , ASP A:194 , SER A:220 , GLN A:221 , ASP A:249 , GLN A:269 , HOH A:550binding site for residue 64K A 401
2AC2SOFTWAREGLN A:221 , HOH A:624binding site for residue CL A 402

(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric/Biological Unit
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Chain A from PDB  Type:PROTEIN  Length:289
                                                                                                                                                                                                                                                                                                                                 
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhh.eeeee......hhhhhhhhhhhhhhhhh.eeee.......hhhhhhhhhhhhhh...eeee....hhhhhhhhhhhhh...eeeee...........eee.hhhhhhhhhhhhhhhhh..eeeeeee.....hhhhhhhhhhhhhhhh...eeeeeeee....hhhhhhhhhhhhhhhh..eeeeee...hhhhhhhhhhh...hhhhh...eeeee..hhhhhhhhhh....eeee.hhhhhhhhhhhhhhhhhh........ee...eeehhhhh..... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5hqj A  25 mKDAKDISVAVIPKVAVPFFDDCNKGAKTAADKAGVKYQWVVPQNTQGSTQVQIIEDLISRHVDGIAISVNEPKSVESVmKRAEQSGIKVLTYDSDSPKSGRSmYIGTNNEQAGATmAETmGKALNGQGEVAIITGQLGAVNLNERIAGIKKGLAKYPGIKVVETQGTDDDLARGVSVVETTLRAHPNLKGIFGVSQVGGPAVAKVLNTREFGAmKGKLEVLAFDDLPDTLKGLKDGYIQGImVQRPVTmGSLAVDHLVAQIQGQEGQPKDIDTGVTVVTKDNmTSYTK 313
                            |       34        44        54        64        74        84        94       104       114       124   |   134      |144|      154       164       174       184       194       204       214       224       234    |  244       254       264  |    274       284       294       304   |     
                            |                                                                            104-MSE                 128-MSE      141-MSE                                                                                           239-MSE                     267-MSE  |                               308-MSE 
                           25-MSE                                                                                                                 145-MSE                                                                                                                          274-MSE
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 Classification and Annotation

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(-) Gene Ontology  (0, 0)

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