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(-) Description

Title :  INHIBITING COMPLEX IL-17A AND IL-17RA INTERACTIONS WITH A LINEAR PEPTIDE
 
Authors :  S. Liu
Date :  11 Jan 16  (Deposition) - 01 Jun 16  (Release) - 01 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.00
Chains :  Asym. Unit :  A,B,H,I,L
Biol. Unit 1:  A,B,H,I,L  (2x)
Keywords :  Il-17, Inflammation, Inhibitor, Complex Crystal Structure, Immune System-Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Liu, J. Desharnais, P. V. Sahasrabudhe, P. Jin, W. Li, B. D. Oates, S. Shanker, M. E. Banker, B. A. Chrunyk, X. Song, X. Feng, M. Griffor, J. Jimenez, G. Chen, D. Tumelty, A. Bhat, C. W. Bradshaw, G. Woodnutt, R. W. Lappe, A. Thorarensen, X. Qiu, J. M. Withka, L. D. Wood
Inhibiting Complex Il-17A And Il-17Ra Interactions With A Linear Peptide.
Sci Rep V. 6 26071 2016
PubMed-ID: 27184415  |  Reference-DOI: 10.1038/SREP26071

(-) Compounds

Molecule 1 - INTERLEUKIN-17A
    Chains: A, B
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Taxid: 7108
    Fragment: UNP RESIDUES 20-155
    Gene: IL17A, CTLA8, IL17
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: IL-17A,CYTOTOXIC T-LYMPHOCYTE-ASSOCIATED ANTIGEN 8,CTLA-8
 
Molecule 2 - CAT-2000 FAB HEAVY CHAIN
    Chains: H
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293
    Expression System Taxid: 9606
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
 
Molecule 3 - IL-17A PEPTIDE INHIBITOR
    Chains: I
    Engineered: YES
    Organism Scientific: SYNTHETIC CONSTRUCT
    Organism Taxid: 32630
    Synthetic: YES
 
Molecule 4 - CAT-2000 FAB LIGHT CHAIN
    Chains: L
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Cell Line: HEK293
    Expression System Taxid: 9606
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606

 Structural Features

(-) Chains, Units

  12345
Asymmetric Unit : ABHIL
Biological Unit 1 (2x): ABHIL

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5HHX)

(-) Sites  (0, 0)

(no "Site" information available for 5HHX)

(-) SS Bonds  (6, 6)

Asymmetric Unit
No.Residues
1A:71 -A:121
2A:76 -A:123
3H:22 -H:92
4H:140 -H:196
5L:23 -L:88
6L:135 -L:194

(-) Cis Peptide Bonds  (5, 5)

Asymmetric Unit
No.Residues
1Tyr A:62 -Pro A:63
2Glu A:102 -Pro A:103
3Phe H:146 -Pro H:147
4Gln H:148 -Pro H:149
5Tyr L:141 -Pro L:142

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5HHX)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5HHX)

(-) Exons   (0, 0)

(no "Exon" information available for 5HHX)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:90
                                                                                                                           
               SCOP domains ------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author hhhhhhhhhhhh...eeeeeee...ee..eeeeeee....ee.....ee...eeeeeeeeeeeeeee...eeeeeeeeeeeeeeee.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------ Transcript
                5hhx A   36 NPKRSSDYYNRSTSPWNLHRNEDPERYPSVIWEAKCRHLGCINADGNVDYHMNSVPIQQEILVLRREPPNSFRLEKILVSVGCTCVTPIV  128
                                    45        55        65        75        85        95       108       118       128
                                                                                             103|                     
                                                                                              107                     


Chain B from PDB  Type:PROTEIN  Length:10
                                           
               SCOP domains ---------- SCOP domains
               CATH domains ---------- CATH domains
               Pfam domains ---------- Pfam domains
         Sec.struct. author ....eeeee. Sec.struct. author
                 SAPs(SNPs) ---------- SAPs(SNPs)
                    PROSITE ---------- PROSITE
                 Transcript ---------- Transcript
                5hhx B   21 TVMVNLNIHN   30
                                    30


Chain H from PDB  Type:PROTEIN  Length:215
                                                                                                                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeee...ee.....eeeeeeee..hhhhheeeeeee.....eeeeeee......eee.hhhh..eeeeee....eeeeee...hhhhheeeeeeee.....eee....eeeee........eeeee.....eeeeeeeeeee.......ee.hhh....eee...ee.....eeeeeeeeee.hhh....eeeeeeehhhheeeeeee.... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hhx H    1 EVQLLESGGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARDLIHGVTRNWGQGTLVTVSSASTKGPSVFPLAPSGGTAALGCLVKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKS  215
                                    10        20        30        40        50  |     59        69        79   |||  86        96    |  105       115       125 ||    140       150       160       170       180       190       200       210     
                                                                              52A                            82A||               100A                        127|                                                                                  
                                                                                                              82B|                                            133                                                                                  
                                                                                                               82C                                                                                                                                 


Chain I from PDB  Type:PROTEIN  Length:14
                                               
               SCOP domains -------------- SCOP domains
               CATH domains -------------- CATH domains
               Pfam domains -------------- Pfam domains
         Sec.struct. author .eeeeehhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------- SAPs(SNPs)
                    PROSITE -------------- PROSITE
                 Transcript -------------- Transcript
                5hhx I    1 IHVTIPADLWDWIN   14
                                    10    


Chain L from PDB  Type:PROTEIN  Length:213
                                                                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...ee...eeee....eeeeeeee...hhhhh..eeeee......eeee.............ee..ee....eeeeeee..hhhhh.eeeeeee....eee...eeeee..........eee..hhhhhhh..eeeeeeeeee....eeeeeee..ee.....ee...ee.....eeeeeeeeehhhhhhhh..eeeeeee..eeeeeee... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5hhx L    1 NFMLTQPHSVSESPGKTVTISCTRSSGSLANYYVQWYQQRPGSSPTIVIFANNQRPSGVPDRFSGSIDSSSNSASLTISGLKTEDEADYYCQTYDPYSVVFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPT  210
                                    11        21      ||29        39        49        59       68A|       77        87        97       107       117       127       137       147       157       167       177       187       197       207   
                                    9|              27A|                                       68A|                                                                                                                                              
                                    11               27B                                        68B
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5HHX)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5HHX)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5HHX)

(-) Gene Ontology  (24, 24)

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  Cis Peptide Bonds
    Gln H:148 - Pro H:149   [ RasMol ]  
    Glu A:102 - Pro A:103   [ RasMol ]  
    Phe H:146 - Pro H:147   [ RasMol ]  
    Tyr A:62 - Pro A:63   [ RasMol ]  
    Tyr L:141 - Pro L:142   [ RasMol ]  
 
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  5hhx
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  IL17_HUMAN | Q16552
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        IL17_HUMAN | Q16552: 2vxs 4hr9 4hsa 4qhu 5hhv 5hi3 5hi4 5hi5

(-) Related Entries Specified in the PDB File

5hhv 5hi3 5hi4 5hi5