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(-) Description

Title :  RNA DEPENDENT RNA POLYMERASE QDE-1 FROM THIELAVIA TERRESTRIS
 
Authors :  X. Qian, F. M. Hamid, A. El Sahili, D. A. Darwis, Y. H. Wong, S. Bhushan, E. V. Makeyev, J. Lescar
Date :  08 Jan 16  (Deposition) - 02 Mar 16  (Release) - 11 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.19
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Keywords :  Transferase, Small Rnas, Qde-1 Orthologues, Evolution (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  X. Qian, F. M. Hamid, A. El Sahili, D. A. Darwis, Y. H. Wong, S. Bhushan, E. V. Makeyev, J. Lescar
Functional Evolution In Orthologous Cell-Encoded Rna-Dependent Rna Polymerases
J. Biol. Chem. V. 291 9295 2016
PubMed-ID: 26907693  |  Reference-DOI: 10.1074/JBC.M115.685933

(-) Compounds

Molecule 1 - RNA DEPENDENT RNA POLYMERASE QDE-1
    Atcc: 38088
    Chains: A, B, C, D
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Plasmid: PFB-LIC-BSE
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: RDRP C-TERMINAL DOMAIN, UNP RESIDUES 364-1373
    Organism Scientific: THIELAVIA TERRESTRIS
    Organism Taxid: 35720
    Other Details: SYNTHETIC GENE FROM AEO68606.1 FROM E364 TO D1373
    Synonym: RDRP QDE

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5FSW)

(-) Sites  (0, 0)

(no "Site" information available for 5FSW)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FSW)

(-) Cis Peptide Bonds  (123, 123)

Asymmetric Unit
No.Residues
1Ser A:23 -Met A:24
2Glu A:25 -Val A:26
3Val A:26 -Tyr A:27
4Tyr A:27 -Ala A:28
5Gln A:31 -Asn A:32
6Ala A:44 -Pro A:45
7Ser A:85 -Leu A:86
8Leu A:86 -Thr A:87
9Thr A:87 -Gln A:88
10Arg A:93 -Gly A:94
11Gly A:94 -Lys A:95
12Lys A:95 -Ser A:96
13Phe A:97 -Pro A:98
14Lys A:133 -Thr A:134
15Leu A:173 -Asn A:174
16Ala A:184 -Ala A:185
17Pro A:246 -Ala A:247
18Pro A:248 -Leu A:249
19Arg A:263 -Arg A:264
20Ser A:584 -Pro A:585
21Gly A:760 -Gly A:761
22Lys A:806 -Val A:807
23Met A:808 -Gln A:809
24Asp A:819 -Ala A:820
25Ala A:820 -Ala A:821
26Leu A:839 -Thr A:840
27Ala A:841 -Glu A:842
28Leu A:846 -Arg A:847
29Ala A:907 -Lys A:908
30Lys A:943 -Thr A:944
31Ser B:23 -Met B:24
32Glu B:25 -Val B:26
33Val B:26 -Tyr B:27
34Tyr B:27 -Ala B:28
35Gln B:31 -Asn B:32
36Ala B:44 -Pro B:45
37Leu B:68 -Arg B:69
38Ser B:85 -Leu B:86
39Leu B:86 -Thr B:87
40Thr B:87 -Gln B:88
41Arg B:93 -Gly B:94
42Gly B:94 -Lys B:95
43Lys B:95 -Ser B:96
44Phe B:97 -Pro B:98
45Lys B:133 -Thr B:134
46Leu B:173 -Asn B:174
47Ala B:184 -Ala B:185
48Pro B:246 -Ala B:247
49Pro B:248 -Leu B:249
50Thr B:263 -Arg B:264
51Ser B:584 -Pro B:585
52Gly B:760 -Gly B:761
53Lys B:806 -Val B:807
54Met B:808 -Gln B:809
55Asp B:819 -Ala B:820
56Ala B:820 -Ala B:821
57Leu B:839 -Thr B:840
58Ala B:841 -Glu B:842
59Leu B:846 -Arg B:847
60Ala B:907 -Lys B:908
61Lys B:943 -Thr B:944
62Ser C:23 -Met C:24
63Glu C:25 -Val C:26
64Val C:26 -Tyr C:27
65Tyr C:27 -Ala C:28
66Gln C:31 -Asn C:32
67Ala C:44 -Pro C:45
68Leu C:68 -Arg C:69
69Ser C:85 -Leu C:86
70Leu C:86 -Thr C:87
71Thr C:87 -Gln C:88
72Arg C:93 -Gly C:94
73Gly C:94 -Lys C:95
74Lys C:95 -Ser C:96
75Phe C:97 -Pro C:98
76Lys C:133 -Thr C:134
77Leu C:173 -Asn C:174
78Ala C:184 -Ala C:185
79Pro C:246 -Ala C:247
80Pro C:248 -Leu C:249
81Thr C:263 -Arg C:264
82Ser C:584 -Pro C:585
83Gly C:760 -Gly C:761
84Lys C:806 -Val C:807
85Met C:808 -Gln C:809
86Asp C:819 -Ala C:820
87Ala C:820 -Ala C:821
88Leu C:839 -Thr C:840
89Ala C:841 -Glu C:842
90Leu C:846 -Arg C:847
91Ala C:907 -Lys C:908
92Lys C:943 -Thr C:944
93Ser D:23 -Met D:24
94Glu D:25 -Val D:26
95Val D:26 -Tyr D:27
96Tyr D:27 -Ala D:28
97Gln D:31 -Asn D:32
98Ala D:44 -Pro D:45
99Leu D:68 -Arg D:69
100Ser D:85 -Leu D:86
101Leu D:86 -Thr D:87
102Thr D:87 -Gln D:88
103Arg D:93 -Gly D:94
104Gly D:94 -Lys D:95
105Lys D:95 -Ser D:96
106Phe D:97 -Pro D:98
107Lys D:133 -Thr D:134
108Leu D:173 -Asn D:174
109Ala D:184 -Ala D:185
110Pro D:246 -Ala D:247
111Pro D:248 -Leu D:249
112Thr D:251 -Arg D:252
113Ser D:584 -Pro D:585
114Gly D:760 -Gly D:761
115Lys D:806 -Val D:807
116Met D:808 -Gln D:809
117Asp D:819 -Ala D:820
118Ala D:820 -Ala D:821
119Leu D:839 -Thr D:840
120Ala D:841 -Glu D:842
121Leu D:846 -Arg D:847
122Ala D:907 -Lys D:908
123Lys D:943 -Thr D:944

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FSW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FSW)

(-) Exons   (0, 0)

(no "Exon" information available for 5FSW)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:924
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhh...........hhhhhhh.hhhhhh.................hhhhhhhhhhh..ee..eeee.eee.ee........ee......eeee...hhhhhh...eeeeeee........hhhhhh..hhhhhhhhh..eee..eeeeeeeeee.......eeeeeeeeeee.............hhhhhhhhhh.hhhhh..hhhhhhhhhhhhh...eeeee.....eee................eeeehhhhhhhhhhhhh......eeeeee..eeeeeee..........eee............hhhh.eeeeeee.........hhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhh...ee..ee.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh......eeeeeeee.........eeeeeeeeeeee..eeeeee..eeeeee.....hhh.eeeeee..hhhhh.....eee......hhhhhh........eeeee.hhhhhh.................ee...hhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....ee.hhhhhhhhhhhh.........hhhhh..........hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhh.....hhhhhh..........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhheeehhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                5fsw A   22 QSMEVYARLQNIWPKFPRWLHAAPLALAWELTRICLHCKVDLEDPTLRYDPSWATSDMAALWRSLTQLDVFRGKSFPERPSAEAFAAALTGNFESRGNTVVLSASLEFNPSKTGPLFLLDMKPLRFDEGCRLTRRFGPDRFLEVLVPSPTALNAPSILKDGGAAQVIRWLTEKPHSLVGRQWQAFYTKDAGAKATFKERVHFFAERGHDFRPAPLRRTEIRVSEMLDWLLQLEQNEYQPHLKLFSRIQLGLSKTFPTVTFEPNQIRHRTDDILSPAGKIMNDGIGRMSRSVARKIRDALGLSDIPSAIQGRMGSAKGMWLMDVADAGDDDWIETYPSQRKWKCDDADALHRTLEIRSVSTELKPAALNLQFLPVLEDRAKDKARMRRAIAARLMNDLKKQFDSQKAAVERPLQFRQWVNECTNSRSERVRHGQVPFLGGLPENKGEVLSFLLNSGFDRRQKYIQDLAFDLQKQRCEVLRTKLNIHVGRSAYMFMVVDFWGVLEENEVHVGFSSKFRDDDTTYMLLTDCDVLVARSPAHFPSDIQKVRAVFKPQLHALKDVIVFPAKGDIPLADKLSGGDYDGDMAWVCWDPDIVENFTNADMPKEPDLSAYLGKDKTTFGELVRDTGTGAAARHEAVYDMINKSFQFAMQPNYLGICTNYKERVCYHNNSVSDGVALLLSTLVGKLVDQSKQGILFDAASWDRLRRERLGGRMSVEDPAYKGDVWAGAGEPRHIVDYLKFAVAKPTIDRELEELHKVMQASRDDDAAAHSWDPDLAVYFENFKALTAESRSLRAVLEALQNALGAVEHEWKVLMLTYPEKVRQLHAKWCAIEPAKTAALLEQPFLADRGTSYWALLRASTAFKAYYKTNPKFVWQMAGAQLAFIKAQMSSGGSDGMPLLVTPLMYAGLAPDGRFVKQYLARLEC 1006
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211||     234       244    || 267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       569       579       589       599       609       619       629       639       649       659       669      |680       690       700       710       720       730       740       750       760       770       780       790       800       810 ||    824       834       844       854       864   ||  881       891  ||   913       926       936       946       956       966|      982       992      1002    
                                                                                                                                                                                                                        212|                    249|                                                                                                                                                                                                                                                                                                           565|                                                                                                         676|                                                                                                                                   812|                                                868|               894|            922|                                     966|                                 
                                                                                                                                                                                                                         226                     263                                                                                                                                                                                                                                                                                                            568                                                                                                          678                                                                                                                                    817                                                 876                907             926                                      973                                 


Chain B from PDB  Type:PROTEIN  Length:922
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhh...........hhhhhhh.hhhhhh.................hhhhhhhhhhh..ee..eee..eee.ee........ee.......eee...hhhhhh...eeeeeee..................hhhhhhh..eee..eeeeeeeeee.......eeeeeeeeeee.............hhhhhhhhhhh.......hhhhhhhhhhhhh...eeeee.....eee................eeeehhhhhhhhhhhhh......eeeeee..eeeeeee..........eee............hhhh.eeeeeee............hhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhh...ee..ee.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh......eeeeeeee.........eeeee.............ee..eeeeee.....hhh.eeeeee..hhhhh....eeee......hhhhhh........eeeee.hhhhhh.................ee...hhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhee.hhhhhhhhhhhhh........hhhhh..........hhhhhhhhhhhhhhhhhhhhh..................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhh..........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhheeehhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fsw B   22 QSMEVYARLQNIWPKFPRWLHAAPLALAWELTRICLHCKVDLEDPTLRYDPSWATSDMAALWRSLTQLDVFRGKSFPERPSAEAFAAALTGNFESRGNTVVLSASLEFNPSKTGPLFLLDMKPLRFDEGCRLTRRFGPDRFLEVLVPSPTALNAPSILKDGGAAQVIRWLTEKPHSLVGRQWQAFYTKDAGAKATFKERVHFFAERGHDFRPAPLTRAQLPVSEMLDWLLQLEQNEYQPHLKLFSRIQLGLSKTFPTVTFEPNQIRHRTDDILSPAGKIMNDGIGRMSRSVARKIRDALGLSDIPSAIQGRMGSAKGMWLMDVADAGDDDWIETYPSQRKWKCDDADALHRTLEIRSVSTELKPAALNLQFLPVLEDRAKDKARMRRAIAARLMNDLKKQFDSQKAAVERPLQFRQWVNECTNSRSERVRHGQVPFLGGLPENKGEVLSFLLNSGFDRRQKYIQDLAFDLQKQRCEVLRTKLNIHVGRSAYMFMVVDFWGVLEENEVHVGFSSKFRDDDTTYMLLTDCDVLVARSPAHFPSDIQKVRAVFKPQLHALKDVIVFPAKGDIPLADKLSGGDYDGDMAWVCWDPDIVENFTNADMPKEPDLSAYLGKDKTTFGELVRDTGTGAAARHEAVYDMINKSFQFAMQPNYLGICTNYKERVCYHNNSVSDGVALLLSTLVGKLVDQSKQGILFDAASWDRLRRERLGGRMSVEDPAYKGDVWAGAGEPRHIVDYLKFAVAKPTIDRELEELHKVMQASRDDDAAAHSWDPDLAVYFENFKALTAESRSLRAVLEALQNALGAVEHEWKVLTYPEKVRQLHAKWCAIEPAKTAALLEQPFLADRGTSYWALLRASTAFKAYYKTNPKFVWQMAGAQLAFIKAQMSSGGSDGMPLLVTPLMYAGLAPDGRFVKQYLARLEC 1006
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211||     234       244    || 267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       569       579       589       599       609       619       629       639       649       659       669      |680       690       700       710       720       730       740       750       760       770       780       790       800       810 ||    824       834       844       854       864 ||    883       893||     915      |928       938       948       958       974       984       994      1004  
                                                                                                                                                                                                                        212|                    249|                                                                                                                                                                                                                                                                                                           565|                                                                                                         676|                                                                                                                                   812|                                              866|               894|            922|                                     966|                                 
                                                                                                                                                                                                                         226                     263                                                                                                                                                                                                                                                                                                            568                                                                                                          678                                                                                                                                    817                                               876                907             926                                      973                                 


Chain C from PDB  Type:PROTEIN  Length:922
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhh...........hhhhhhh.hhhhhh.................hhhhhhhhhhh..ee..eee..eeeeee........eeeee....eee.hhhhhhhh...eeeeeee..................hhhhhhh..eee..eeeeeeeeee.......eeeeeeeeeee.............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...eeeee.....eee................eeeehhhhhhhhhhhhh......eeeeee..eeeeeee..........eee............hhhh.eeeeeee............hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhh...ee..ee.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh......eeeeeeee.........eeeeeeeeeeee..eeeeee..eeeeee.....hhh.eeeeee..hhhhh....eeee......hhhhhh........eeeee.hhhhhh.................ee...hhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh.....ee.hhhhhhhhhhhh.........hhhhh..........hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhh........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhheeehhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fsw C   22 QSMEVYARLQNIWPKFPRWLHAAPLALAWELTRICLHCKVDLEDPTLRYDPSWATSDMAALWRSLTQLDVFRGKSFPERPSAEAFAAALTGNFESRGNTVVLSASLEFNPSKTGPLFLLDMKPLRFDEGCRLTRRFGPDRFLEVLVPSPTALNAPSILKDGGAAQVIRWLTEKPHSLVGRQWQAFYTKDAGAKATFKERVHFFAERGHDFRPAPLTRAQLPVSEMLDWLLQLEQNEYQPHLKLFSRIQLGLSKTFPTVTFEPNQIRHRTDDILSPAGKIMNDGIGRMSRSVARKIRDALGLSDIPSAIQGRMGSAKGMWLMDVADAGDDDWIETYPSQRKWKCDDADALHRTLEIRSVSTELKPAALNLQFLPVLEDRAKDKARMRRAIAARLMNDLKKQFDSQKAAVERPLQFRQWVNECTNSRSERVRHGQVPFLGGLPENKGEVLSFLLNSGFDRRQKYIQDLAFDLQKQRCEVLRTKLNIHVGRSAYMFMVVDFWGVLEENEVHVGFSSKFRDDDTTYMLLTDCDVLVARSPAHFPSDIQKVRAVFKPQLHALKDVIVFPAKGDIPLADKLSGGDYDGDMAWVCWDPDIVENFTNADMPKEPDLSAYLGKDKTTFGELVRDTGTGAAARHEAVYDMINKSFQFAMQPNYLGICTNYKERVCYHNNSVSDGVALLLSTLVGKLVDQSKQGILFDAASWDRLRRERLGGRMSVEDPAYKGDVWAGAGEPRHIVDYLKFAVAKPTIDRELEELHKVMQASRDDDAAAHSWDPDLAVYFENFKALTAESRSLRAVLEALQNALGAVEHEWKVLTYPEKVRQLHAKWCAIEPAKTAALLEQPFLADRGTSYWALLRASTAFKAYYKTNPKFVWQMAGAQLAFIKAQMSSGGSDGMPLLVTPLMYAGLAPDGRFVKQYLARLEC 1006
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211||     234       244    || 267       277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       569       579       589       599       609       619       629       639       649       659       669      |680       690       700       710       720       730       740       750       760       770       780       790       800       810 ||    824       834       844       854       864 ||    883       893||     915      |928       938       948       958       974       984       994      1004  
                                                                                                                                                                                                                        212|                    249|                                                                                                                                                                                                                                                                                                           565|                                                                                                         676|                                                                                                                                   812|                                              866|               894|            922|                                     966|                                 
                                                                                                                                                                                                                         226                     263                                                                                                                                                                                                                                                                                                            568                                                                                                          678                                                                                                                                    817                                               876                907             926                                      973                                 


Chain D from PDB  Type:PROTEIN  Length:922
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......................hhhhhhhhhhhhhhh...........hhhhhhh.hhhhhh.................hhhhhhhhhhh..ee..eee..eeeeee........eeeee....eee.hhhhhhhh...eeeeeee..................hhhhhhh..eee..eeeeeeeeee.......eeeeeeeeeee.............hhhhhhhhhhhhhhhh..hhhhhhhhhhhhh...eeeee.....eee................eeeehhhhhhhhhhhhh......eeeeee..eeeeeee..........eee............hhhh.eeeeeee............hhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhh...ee..ee.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhh......eeeeeeee.........eeeeeeeeeeee..eeeeee..eeeeee.....hhh.eeeeee..hhhhh....eeee......hhhhhh........eeeee.hhhhhh.................ee...hhhhhhhh...hhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhee.hhhhhhhhhhhh.........hhhhh..........hhhhhhhhhhhhhhhhhhhhhh.................hhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh.....hhhhhhhh........hhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhheeehhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5fsw D   22 QSMEVYARLQNIWPKFPRWLHAAPLALAWELTRICLHCKVDLEDPTLRYDPSWATSDMAALWRSLTQLDVFRGKSFPERPSAEAFAAALTGNFESRGNTVVLSASLEFNPSKTGPLFLLDMKPLRFDEGCRLTRRFGPDRFLEVLVPSPTALNAPSILKDGGAAQVIRWLTEKPHSLVGRQWQAFYTKDAGAKATFKERVHFFAERGHDFRPAPLTRAQLPVSEMLDWLLQLEQNEYQPHLKLFSRIQLGLSKTFPTVTFEPNQIRHRTDDILSPAGKIMNDGIGRMSRSVARKIRDALGLSDIPSAIQGRMGSAKGMWLMDVADAGDDDWIETYPSQRKWKCDDADALHRTLEIRSVSTELKPAALNLQFLPVLEDRAKDKARMRRAIAARLMNDLKKQFDSQKAAVERPLQFRQWVNECTNSRSERVRHGQVPFLGGLPENKGEVLSFLLNSGFDRRQKYIQDLAFDLQKQRCEVLRTKLNIHVGRSAYMFMVVDFWGVLEENEVHVGFSSKFRDDDTTYMLLTDCDVLVARSPAHFPSDIQKVRAVFKPQLHALKDVIVFPAKGDIPLADKLSGGDYDGDMAWVCWDPDIVENFTNADMPKEPDLSAYLGKDKTTFGELVRDTGTGAAARHEAVYDMINKSFQFAMQPNYLGICTNYKERVCYHNNSVSDGVALLLSTLVGKLVDQSKQGILFDAASWDRLRRERLGGRMSVEDPAYKGDVWAGAGEPRHIVDYLKFAVAKPTIDRELEELHKVMQASRDDDAAAHSWDPDLAVYFENFKALTAESRSLRAVLEALQNALGAVEHEWKVLTYPEKVRQLHAKWCAIEPAKTAALLEQPFLADRGTSYWALLRASTAFKAYYKTNPKFVWQMAGAQLAFIKAQMSSGGSDGMPLLVTPLMYAGLAPDGRFVKQYLARLEC 1006
                                    31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211||     234       244    || 255||     277       287       297       307       317       327       337       347       357       367       377       387       397       407       417       427       437       447       457       467       477       487       497       507       517       527       537       547       557       569       579       589       599       609       619       629       639       649       659       669      |680       690       700       710       720       730       740       750       760       770       780       790       800       810 ||    824       834       844       854       864 ||    883       893||     915      |928       938       948       958       974       984       994      1004  
                                                                                                                                                                                                                        212|                    249|  256|                                                                                                                                                                                                                                                                                                     565|                                                                                                         676|                                                                                                                                   812|                                              866|               894|            922|                                     966|                                 
                                                                                                                                                                                                                         226                     251   269                                                                                                                                                                                                                                                                                                      568                                                                                                          678                                                                                                                                    817                                               876                907             926                                      973
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FSW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FSW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FSW)

(-) Gene Ontology  (2, 2)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
  Complete Structure
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  Ligands, Modified Residues, Ions
(no "Ligands, Modified Residues, Ions" information available for 5fsw)
 
  Sites
(no "Sites" information available for 5fsw)
 
  Cis Peptide Bonds
    Ala A:184 - Ala A:185   [ RasMol ]  
    Ala A:44 - Pro A:45   [ RasMol ]  
    Ala A:820 - Ala A:821   [ RasMol ]  
    Ala A:841 - Glu A:842   [ RasMol ]  
    Ala A:907 - Lys A:908   [ RasMol ]  
    Ala B:184 - Ala B:185   [ RasMol ]  
    Ala B:44 - Pro B:45   [ RasMol ]  
    Ala B:820 - Ala B:821   [ RasMol ]  
    Ala B:841 - Glu B:842   [ RasMol ]  
    Ala B:907 - Lys B:908   [ RasMol ]  
    Ala C:184 - Ala C:185   [ RasMol ]  
    Ala C:44 - Pro C:45   [ RasMol ]  
    Ala C:820 - Ala C:821   [ RasMol ]  
    Ala C:841 - Glu C:842   [ RasMol ]  
    Ala C:907 - Lys C:908   [ RasMol ]  
    Ala D:184 - Ala D:185   [ RasMol ]  
    Ala D:44 - Pro D:45   [ RasMol ]  
    Ala D:820 - Ala D:821   [ RasMol ]  
    Ala D:841 - Glu D:842   [ RasMol ]  
    Ala D:907 - Lys D:908   [ RasMol ]  
    Arg A:263 - Arg A:264   [ RasMol ]  
    Arg A:93 - Gly A:94   [ RasMol ]  
    Arg B:93 - Gly B:94   [ RasMol ]  
    Arg C:93 - Gly C:94   [ RasMol ]  
    Arg D:93 - Gly D:94   [ RasMol ]  
    Asp A:819 - Ala A:820   [ RasMol ]  
    Asp B:819 - Ala B:820   [ RasMol ]  
    Asp C:819 - Ala C:820   [ RasMol ]  
    Asp D:819 - Ala D:820   [ RasMol ]  
    Gln A:31 - Asn A:32   [ RasMol ]  
    Gln B:31 - Asn B:32   [ RasMol ]  
    Gln C:31 - Asn C:32   [ RasMol ]  
    Gln D:31 - Asn D:32   [ RasMol ]  
    Glu A:25 - Val A:26   [ RasMol ]  
    Glu B:25 - Val B:26   [ RasMol ]  
    Glu C:25 - Val C:26   [ RasMol ]  
    Glu D:25 - Val D:26   [ RasMol ]  
    Gly A:760 - Gly A:761   [ RasMol ]  
    Gly A:94 - Lys A:95   [ RasMol ]  
    Gly B:760 - Gly B:761   [ RasMol ]  
    Gly B:94 - Lys B:95   [ RasMol ]  
    Gly C:760 - Gly C:761   [ RasMol ]  
    Gly C:94 - Lys C:95   [ RasMol ]  
    Gly D:760 - Gly D:761   [ RasMol ]  
    Gly D:94 - Lys D:95   [ RasMol ]  
    Leu A:173 - Asn A:174   [ RasMol ]  
    Leu A:839 - Thr A:840   [ RasMol ]  
    Leu A:846 - Arg A:847   [ RasMol ]  
    Leu A:86 - Thr A:87   [ RasMol ]  
    Leu B:173 - Asn B:174   [ RasMol ]  
    Leu B:68 - Arg B:69   [ RasMol ]  
    Leu B:839 - Thr B:840   [ RasMol ]  
    Leu B:846 - Arg B:847   [ RasMol ]  
    Leu B:86 - Thr B:87   [ RasMol ]  
    Leu C:173 - Asn C:174   [ RasMol ]  
    Leu C:68 - Arg C:69   [ RasMol ]  
    Leu C:839 - Thr C:840   [ RasMol ]  
    Leu C:846 - Arg C:847   [ RasMol ]  
    Leu C:86 - Thr C:87   [ RasMol ]  
    Leu D:173 - Asn D:174   [ RasMol ]  
    Leu D:68 - Arg D:69   [ RasMol ]  
    Leu D:839 - Thr D:840   [ RasMol ]  
    Leu D:846 - Arg D:847   [ RasMol ]  
    Leu D:86 - Thr D:87   [ RasMol ]  
    Lys A:133 - Thr A:134   [ RasMol ]  
    Lys A:806 - Val A:807   [ RasMol ]  
    Lys A:943 - Thr A:944   [ RasMol ]  
    Lys A:95 - Ser A:96   [ RasMol ]  
    Lys B:133 - Thr B:134   [ RasMol ]  
    Lys B:806 - Val B:807   [ RasMol ]  
    Lys B:943 - Thr B:944   [ RasMol ]  
    Lys B:95 - Ser B:96   [ RasMol ]  
    Lys C:133 - Thr C:134   [ RasMol ]  
    Lys C:806 - Val C:807   [ RasMol ]  
    Lys C:943 - Thr C:944   [ RasMol ]  
    Lys C:95 - Ser C:96   [ RasMol ]  
    Lys D:133 - Thr D:134   [ RasMol ]  
    Lys D:806 - Val D:807   [ RasMol ]  
    Lys D:943 - Thr D:944   [ RasMol ]  
    Lys D:95 - Ser D:96   [ RasMol ]  
    Met A:808 - Gln A:809   [ RasMol ]  
    Met B:808 - Gln B:809   [ RasMol ]  
    Met C:808 - Gln C:809   [ RasMol ]  
    Met D:808 - Gln D:809   [ RasMol ]  
    Phe A:97 - Pro A:98   [ RasMol ]  
    Phe B:97 - Pro B:98   [ RasMol ]  
    Phe C:97 - Pro C:98   [ RasMol ]  
    Phe D:97 - Pro D:98   [ RasMol ]  
    Pro A:246 - Ala A:247   [ RasMol ]  
    Pro A:248 - Leu A:249   [ RasMol ]  
    Pro B:246 - Ala B:247   [ RasMol ]  
    Pro B:248 - Leu B:249   [ RasMol ]  
    Pro C:246 - Ala C:247   [ RasMol ]  
    Pro C:248 - Leu C:249   [ RasMol ]  
    Pro D:246 - Ala D:247   [ RasMol ]  
    Pro D:248 - Leu D:249   [ RasMol ]  
    Ser A:23 - Met A:24   [ RasMol ]  
    Ser A:584 - Pro A:585   [ RasMol ]  
    Ser A:85 - Leu A:86   [ RasMol ]  
    Ser B:23 - Met B:24   [ RasMol ]  
    Ser B:584 - Pro B:585   [ RasMol ]  
    Ser B:85 - Leu B:86   [ RasMol ]  
    Ser C:23 - Met C:24   [ RasMol ]  
    Ser C:584 - Pro C:585   [ RasMol ]  
    Ser C:85 - Leu C:86   [ RasMol ]  
    Ser D:23 - Met D:24   [ RasMol ]  
    Ser D:584 - Pro D:585   [ RasMol ]  
    Ser D:85 - Leu D:86   [ RasMol ]  
    Thr A:87 - Gln A:88   [ RasMol ]  
    Thr B:263 - Arg B:264   [ RasMol ]  
    Thr B:87 - Gln B:88   [ RasMol ]  
    Thr C:263 - Arg C:264   [ RasMol ]  
    Thr C:87 - Gln C:88   [ RasMol ]  
    Thr D:251 - Arg D:252   [ RasMol ]  
    Thr D:87 - Gln D:88   [ RasMol ]  
    Tyr A:27 - Ala A:28   [ RasMol ]  
    Tyr B:27 - Ala B:28   [ RasMol ]  
    Tyr C:27 - Ala C:28   [ RasMol ]  
    Tyr D:27 - Ala D:28   [ RasMol ]  
    Val A:26 - Tyr A:27   [ RasMol ]  
    Val B:26 - Tyr B:27   [ RasMol ]  
    Val C:26 - Tyr C:27   [ RasMol ]  
    Val D:26 - Tyr D:27   [ RasMol ]  
 
Biological Units
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    Biological Unit 1  [ Jena3D ]
    Biological Unit 2  [ Jena3D ]

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  5fsw
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    Secondary Structure: DSSP (structure derived) | HSSP (homology derived)
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  G2R911_THITE | G2R911
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

(no "Entries Sharing at Least One Protein Chain" available for 5FSW)

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5FSW)