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(-) Description

Title :  COMPLEX OF SUBTILASE SUBTY FROM BACILLUS SP. TY145 WITH CHYMOTRYPSIN INHIBITOR CI2A
 
Authors :  K. E. Mcauley, A. Svendsen, P. R. Oestergaard, J. Dohnalek, K. S. Wilson
Date :  18 Dec 15  (Deposition) - 18 May 16  (Release) - 18 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.80
Chains :  Asym./Biol. Unit :  A,I
Keywords :  Protease, Subtilase, Complex, Inhibitor, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Dohnalek, K. E. Mcauley, A. M. Brzozowski, P. R. Oestergaard, A. Svendsen, K. S. Wilson
Stabilization Of Enzymes By Metal Binding: Structures Of Tw Alkalophilic Bacillus Subtilases And Analysis Of The Second Metal-Binding Site Of The Subtilase Family
To Be Published 203 2016
PubMed: search  |  Reference-DOI: 10.4032/9789814669337

(-) Compounds

Molecule 1 - ENZYME SUBTILASE SUBTY FROM BACILLUS SP. TY145
    Chains: A
    EC Number: 3.4.21.14
    Engineered: YES
    Expression System: BACILLUS SUBTILIS
    Expression System Taxid: 1423
    Organism Scientific: BACILLUS SP.
    Organism Taxid: 1409
    Other Details: THE SEQUENCE IS AVAILABLE IN PATENT WO 2004067737 A1, PAGE 118
 
Molecule 2 - SUBTILISIN-CHYMOTRYPSIN INHIBITOR-2A
    Chains: I
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Organism Common: BARLEY
    Organism Scientific: HORDEUM VULGARE
    Organism Taxid: 4513
    Synonym: CI-2A

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AI

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 3)

Asymmetric/Biological Unit (2, 3)
No.NameCountTypeFull Name
1CA2Ligand/IonCALCIUM ION
2NA1Ligand/IonSODIUM ION

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWARETHR A:215 , ASP A:218 , ILE A:220 , GLN A:222 , ASP A:225 , HOH A:546binding site for residue CA A 401
2AC2SOFTWAREASP A:288 , ILE A:289 , GLY A:296 , GLY A:298 , ASP A:300 , SER A:303 , HOH A:559binding site for residue CA A 402
3AC3SOFTWAREGLY A:182 , GLY A:183 , LEU A:184 , ALA A:187 , HOH A:630 , HOH A:692binding site for residue NA A 403

(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:52 -A:66

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Gly A:172 -Ser A:173
2Phe A:180 -Pro A:181

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FFN)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FFN)

(-) Exons   (0, 0)

(no "Exon" information available for 5FFN)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:311
                                                                                                                                                                                                                                                                                                                                                       
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhh............eeeeeee.............eeeeee.......ee.......hhhhhhhhhhhh................eeeeee......eehhhhhhhhhhhhhhhhhhhh.eeeeee.ee....hhhhhhhhhhhhhh..eeeee....................eeeeeeeeeee..eeee.......hhhhh...........eeee...eeee.....eeee.hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh........................ Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ffn A   1 AVPSTQTPWGIKSIYNDQSITKTTGGSGIKVAVLDTGVYTSHLDLAGSAEQCKDFTQSNPLVDGSCTDRQGHGTHVAGTVLAHGGSNGQGVYGVAPQAKLWAYKVLGDNGSGYSDDIAAAIRHVADEASRTGSKVVINMSLGSSAKDSLIASAVDYAYGKGVLIVAAAGNSGSGSNTIGFPGGLVNAVAVAALENVQQNGTYRVADFSSRGNPATAGDYIIQERDIEVSAPGASVESTWYTGGYNTISGTSMATPHVAGLAAKIWSANTSLSHSQLRTELQNRAKVYDIKGGIGAGTGDDYASGFGYPRVK 311
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310 


Chain I from PDB  Type:PROTEIN  Length:64
                                                                                                
               SCOP domains ---------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhh..hhhhhhhhhhhhh...eeeeee...eee......eeeeee..........ee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------- Transcript
                 5ffn I  21 LKTEWPELVGKSVEEAKKVILQDKPEAQIIVLPVGTIVTMEYRIDRVRLFVDKLDNIAQVPRVG  84
                                    30        40        50        60        70        80
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FFN)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FFN)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FFN)

(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        ICI2_HORVU | P01053: 1ciq 1cir 1cis 1coa 1cq4 1lw6 1ypa 1ypb 1ypc 2ci2 2sni 3ci2 5fbz

(-) Related Entries Specified in the PDB File

5fax A DIFFERENT SUBTILASE INCLUDED IN THE SAME STUDY AND PUBLICATION.
5fbz A DIFFERENT SUBTILASE INCLUDED IN THE SAME STUDY AND PUBLICATION.