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(-) Description

Title :  X-RAY CRYSTAL STRUCTURE OF ESCRT-III SNF7 CORE DOMAIN (CONFORMATION A)
 
Authors :  S. Tang, W. M. Henne, P. P. Borbat, N. J. Buchkovich, J. H. Freed, Y. Mao, J. C. Fromme, S. D. Emr
Date :  15 Dec 15  (Deposition) - 30 Dec 15  (Release) - 30 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Escrt, Snf7, Active, Core, Protein Transport (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. Tang, W. M. Henne, P. P. Borbat, N. J. Buchkovich, J. H. Freed, Y. Mao, J. C. Fromme, S. D. Emr
Structural Basis For Activation, Assembly And Membrane Binding Of Escrt-Iii Snf7 Filaments.
Elife V. 4 2015
PubMed-ID: 26670543  |  Reference-DOI: 10.7554/ELIFE.12548

(-) Compounds

Molecule 1 - VACUOLAR-SORTING PROTEIN SNF7
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET28A HIS6-SUMO-SNF7N12-P150
    Expression System Strain: ROSETTA
    Expression System Taxid: 562
    Expression System Vector Type: PET28A
    Gene: SNF7, DID1, VPS32, YLR025W
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / S288C)
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C
    Synonym: DOA4-INDEPENDENT DEGRADATION PROTEIN 1,VACUOLAR PROTEIN- SORTING-ASSOCIATED PROTEIN 32

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5FD7)

(-) Sites  (0, 0)

(no "Site" information available for 5FD7)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5FD7)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5FD7)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5FD7)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5FD7)

(-) Exons   (0, 0)

(no "Exon" information available for 5FD7)

(-) Sequences/Alignments

Asymmetric/Biological Unit
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(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:123
                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------- Transcript
                 5fd7 A  18 SPTKAIVRLREHINLLSKKQSHLRTQITNQENEARIFLTKGNKVMAKNALKKKKTIEQLLSKVEGTMESMEQQLFSIESANLNLETMRAMQEGAKAMKTIHSGLDIDKVDETMDEIREQVELG 140
                                    27        37        47        57        67        77        87        97       107       117       127       137
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5FD7)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5FD7)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5FD7)

(-) Gene Ontology  (16, 16)

Asymmetric/Biological Unit(hide GO term definitions)

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  5fd7
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  SNF7_YEAST | P39929
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SNF7_YEAST | P39929: 5fd9

(-) Related Entries Specified in the PDB File

5fd7