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(-) Description

Title :  CRYSTAL STRUCTURE OF MYO7B N-MYTH4-FERM-SH3 IN COMPLEX WITH ANKS4B CEN
 
Authors :  J. Li, Y. He, Q. Lu, M. Zhang
Date :  03 Dec 15  (Deposition) - 16 Mar 16  (Release) - 16 Mar 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.41
Chains :  Asym./Biol. Unit :  A,B
Keywords :  Motor Protein, Protein Binding, Structural Protein, Protein Transport, Motor Protein-Protein Binding Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. Li, Y. He, Q. Lu, M. Zhang
Mechanistic Basis Of Organization Of The Harmonin/Ush1C-Mediated Brush Border Microvilli Tip-Link Complex
Dev. Cell V. 36 179 2016
PubMed-ID: 26812017  |  Reference-DOI: 10.1016/J.DEVCEL.2015.12.020

(-) Compounds

Molecule 1 - UNCONVENTIONAL MYOSIN-VIIB
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: N-MYTH4-FERM-SH3, UNP RESIDUES 962-1578
    Gene: MYO7B
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
 
Molecule 2 - ANKYRIN REPEAT AND SAM DOMAIN-CONTAINING PROTEIN 4B
    Chains: B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: CEN, UNP RESIDUES 252-352
    Gene: ANKS4B, HARP
    Organism Common: MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: ANKS4B

 Structural Features

(-) Chains, Units

  12
Asymmetric/Biological Unit : AB

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5F3Y)

(-) Sites  (0, 0)

(no "Site" information available for 5F3Y)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5F3Y)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5F3Y)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5F3Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5F3Y)

(-) Exons   (0, 0)

(no "Exon" information available for 5F3Y)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:549
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhh.......................hhhhhhhhhhhhhhhhh..............hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhh....hhhhhhhhhhhhhhhh......hhhhhhhhhhh..eeeeeee....eeeeee....hhhhhhhhhhhhhh......eeeeeee..eeee......hhhhhhhhhhhhhhhhh.......eeeeeee...........hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhh.....eeeeeeeee........eeeee....eeee.....eeeeehhh.eeeeee..eeeeee...eeeee..hhhhhhhhhhhhhhhhhhhh.eeee...................eee............eeeeee.....eeeee...eee.......hhhhhhhh. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5f3y A  972 TFPKFAVTYFQKSASHTHIQKPLRYPLLYHENDTDHSAALDVWIIILRFMGDLPEPVVISDRPMSNLEKVHFIVGYAIMRPGLRDEIYCQICKQLSENYKTSSRARGWILLSLCLGCFPPSERFMKYLLNFISQGPPSYGPFCAERLQRTFANGVRAEPPTWLELQAVKSKKHIPIQVILATGRSLTISVDSASTSREICQHVAQKQGLRDNLGFSLQVAVYDKFWSLGSGCDHLMDAVAQCEQLARERGESQRQAPWRIYFRKEFFTPWHDSQEDPVSTELIYHQVLRGVWSGEYNFEKEEELVELLARHCYVQLGATVKSNAVQELLPSCVPSKLYRTKSPEKWASLVTAAHAKAQYTQATPLAVREQTVEAARLLWPLLFSRLFEVTTLSGPRLPKTQLVLAINWKGMYFLDQKERTLLGLSFAEVMGLVANKKLLLATLQEEYEFVSPSSVAIAEMVALFLGGLKERSVFAMALQDRRATDDITLLPFKKGDLLILTKKQGLLASENWALGQNDRTGKTGLVPTACLYTIPSVTKPSTQLLSLLA 1559
                                   981       991      1001      1011      1021      1062      1072      1082      1092      1102      1112      1122      1132      1142      1152      1162      1172      1182      1192      1202      1212      1222      1232      1242      1252      1262      1272      1282      1292      1302      1312      1322      1332      1342      1352      1362||    1374      1384      1394      1404      1414      1424      1434    ||1450      1460      1470      1480      1490      1500      1510      1520      1530      1540      1550         
                                                                                  1029|                                                                                                                                                                                                                                                                                                          1363|                                                                     1439|                                                                                                                 
                                                                                   1061                                                                                                                                                                                                                                                                                                           1366                                                                      1446                                                                                                                 


Chain B from PDB  Type:PROTEIN  Length:13
                                              
               SCOP domains ------------- SCOP domains
               CATH domains ------------- CATH domains
               Pfam domains ------------- Pfam domains
         Sec.struct. author ...ee...ee... Sec.struct. author
                 SAPs(SNPs) ------------- SAPs(SNPs)
                    PROSITE ------------- PROSITE
                 Transcript ------------- Transcript
                5f3y B  263 SILNRPGLGSIVF  275
                                   272
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5F3Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5F3Y)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5F3Y)

(-) Gene Ontology  (20, 25)

Asymmetric/Biological Unit(hide GO term definitions)

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(no "Cis Peptide Bonds" information available for 5f3y)
 

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  5f3y
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  ANS4B_MOUSE | Q8K3X6
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  MYO7B_MOUSE | Q99MZ6
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

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        ANS4B_MOUSE | Q8K3X6: 5f3x

(-) Related Entries Specified in the PDB File

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