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(-) Description

Title :  SCABIN TOXIN FROM STREPTOMYCES SCABIES IN COMPLEX WITH INHIBITOR P6E
 
Authors :  R. Ravulapalli, B. Lyons, A. R. Merrill
Date :  22 Nov 15  (Deposition) - 23 Mar 16  (Release) - 08 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym./Biol. Unit :  A
Keywords :  Transferase, Inhibitor, Transferase-Transferase Inhibitor Complex (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  B. Lyons, R. Ravulapalli, J. Lanoue, M. R. Lugo, D. Dutta, S. Carlin, A. R. Merrill
Scabin, A Novel Dna-Acting Adp-Ribosyltransferase From Streptomyces Scabies.
J. Biol. Chem. V. 291 11198 2016
PubMed-ID: 27002155  |  Reference-DOI: 10.1074/JBC.M115.707653

(-) Compounds

Molecule 1 - PUTATIVE ADP-RIBOSYLTRANSFERASE SCABIN
    Chains: A
    EC Number: 2.4.2.31
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: SCAB_27771
    Organism Scientific: STREPTOMYCES SCABIEI 87.22
    Organism Taxid: 680198
    Strain: 87.22

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 1)

Asymmetric/Biological Unit (1, 1)
No.NameCountTypeFull Name
15TQ1Ligand/Ion4-(8-FLUORANYL-6-OXIDANYLIDENE-1,3,4,5-TETRAHYDROBENZO[C][1,6]NAPHTHYRIDIN-2-YL)BUTANOIC ACID

(-) Sites  (1, 1)

Asymmetric Unit (1, 1)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:77 , SER A:78 , LYS A:94 , SER A:117 , THR A:118 , LEU A:124 , TRP A:128 , GLN A:158 , GLU A:160 , HOH A:449 , HOH A:461 , HOH A:494binding site for residue 5TQ A 301

(-) SS Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1A:42 -A:72
2A:176 -A:190

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Thr A:63 -Pro A:64

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EWY)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EWY)

(-) Exons   (0, 0)

(no "Exon" information available for 5EWY)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:165
                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................hhhhh............eeeee..hhhhhhhhh...........hhhhhhhh.....eeeee...hhhhhh....eeeee.....eehhhhhh....hhhh.eeeee...hhh.eeeeeeee....ee.hhhhee........ Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ewy A  36 KAAAPACPRFDDPVHAAADPRVDVERITPDPVWRTTCGTLYRSDSRGPAVVFEQGFLPKDVIDGQYDIESYVLVNQPSPYVSTTYDHDLYKTWYKSGYNYYIDAPGGVDVNKTIGDRHKWADQVEVAFPGGIRTEFVIGVCPVDKKTRTEKMSECVGNPHYEPWH 200
                                    45        55        65        75        85        95       105       115       125       135       145       155       165       175       185       195
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EWY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EWY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EWY)

(-) Gene Ontology  (0, 0)

Asymmetric/Biological Unit(hide GO term definitions)
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        C9Z6T8_STRSW | C9Z6T8: 5daz 5ewk

(-) Related Entries Specified in the PDB File

5ewk