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(-) Description

Title :  C MEROLAE U4 SNRNP PROTEIN SNU13
 
Authors :  E. L. Garside, C. Black, S. Rader, A. M. Macmillan
Date :  20 Nov 15  (Deposition) - 20 Apr 16  (Release) - 20 Apr 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.35
Chains :  Asym./Biol. Unit :  A
Keywords :  Splicing, Rna Binding Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  C. S. Black, E. L. Garside, A. M. Macmillan, S. D. Rader
Conserved Structure Of Snu13 From The Highly Reduced Spliceosome Of Cyanidioschyzon Merolae.
Protein Sci. V. 25 911 2016
PubMed-ID: 26833716  |  Reference-DOI: 10.1002/PRO.2894

(-) Compounds

Molecule 1 - BOX C/D SNORNP AND U4 SNRNP COMPONENT SNU13P
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: CYME_CMP335C
    Organism Common: RED ALGA
    Organism Scientific: CYANIDIOSCHYZON MEROLAE
    Organism Taxid: 45157

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr A:28 -Pro A:29
2Gln A:78 -Pro A:79

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EWR)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:122
                                                                                                                                                          
               SCOP domains -------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........hhhhhhhhhhhhhhhhhh..eeehhhhhhhhhhh..eeeeeee....hhhhhhhhhhhhhhh...eeee.hhhhhhhhh.......eeeee....hhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ewr A  24 DPRAYPFAPADLVVEILDLVQQASHYKQIKKGLNEVLKSMNRGLAEFVVLAADTQPLEILLSAPLVAEDKAVPYVFVPSKAALGRACGVSRPVIACAVLRADMSQLRNQITALRTKIEQLLL 145
                                    33        43        53        63        73        83        93       103       113       123       133       143
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Gln A:78 - Pro A:79   [ RasMol ]  
    Tyr A:28 - Pro A:29   [ RasMol ]  
 

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