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Title :   CRYSTAL STRUCTURE OF HCV NS3/4A PROTEASE IN COMPLEX WITH 5172-MCP1P3 (MK-5172 P1-P3 MACROCYCLIC ANALOGUE)

Authors :   D. I. Soumana, N. K. Yilmaz, A. Ali, K. L. Prachanronarong, C. Aydin, C. A

Date :   11 Nov 15 (Deposition) - 13 Jan 16 (Release) - 27 Apr 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.30

Chains :   Asym./Biol. Unit : A

Keywords :   Macrocyclization, Mk-5172 Analogue, Grazoprevir, Hcv Protease Inhibitor Resistance, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   D. I. Soumana, N. Kurt Yilmaz, K. L. Prachanronarong, C. Aydin, A. Ali C. A. Schiffer
Structural And Thermodynamic Effects Of Macrocyclization In Hcv Ns3/4A Inhibitor Mk-5172.
Acs Chem. Biol. V. 11 900 2016
PubMed-ID: 26682473 | Reference-DOI: 10.1021/ACSCHEMBIO.5B00647
(for further references see the PDB file header)

Compounds

Structural Features

Chains, Units

Ligands, Modified Residues, Ions (3, 3)

Sites (3, 3)

Asymmetric Unit (3, 3)

No.	Name	Evidence	Residues	Description
1	AC1	SOFTWARE	CYS A:1097 , CYS A:1099 , CYS A:1145 , HIS A:1149	binding site for residue ZN A 1201
2	AC2	SOFTWARE	TYR A:1006 , GLN A:1008 , TYR A:1056 , 5R2 A:1203 , HOH A:1311 , HOH A:1336 , HOH A:1359 , HOH A:1379	binding site for residue SO4 A 1202
3	AC3	SOFTWARE	PHE A:1043 , TYR A:1056 , HIS A:1057 , GLY A:1058 , VAL A:1078 , ASP A:1081 , ILE A:1132 , LEU A:1135 , LYS A:1136 , GLY A:1137 , SER A:1138 , SER A:1139 , PHE A:1154 , ARG A:1155 , ALA A:1156 , ALA A:1157 , SO4 A:1202 , HOH A:1321 , HOH A:1350 , HOH A:1351	binding site for residue 5R2 A 1203

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

Sequence-Structure Mapping

SAPs(SNPs)/Variants (0, 0)

PROSITE Motifs (0, 0)

Exons (0, 0)

Sequences/Alignments

Asymmetric/Biological Unit

Reformat:	Number of residues per line = ('0' or empty: single-line sequence representation)
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Chain A from PDB  Type:PROTEIN  Length:197
                                                                                                                                                                                                                                      
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........eeeeeee......eeee..hhhhhhhhhhhh.........eeeee....eeeeeee..eeeehhhhhh..............eee....eeeee................eeeee.....eeeeee....eeeeeeeee.hhh......eee.....eeeeeeeeeee..eeeeeeeeehhhhhhhh Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5epn A  983 MASMKKKGSVVIVGRINLSGDTAYAQQTRGEEGCQETSQTGRDKNQVEGEVQIVSTATQTFLATSINGVLWTVYHGAGTRTIASPKGPVTQMYTNVDKDLVGWQAPQGSRSLTPCTCGSSDLYLVTRHADVIPVRRRGDSRGSLLSPRPISYLKGSSGGPLLCPAGHAVGIFRAAVSTRGVAKAVDFIPVESLETTM 1179
                                   992      1002      1012      1022      1032      1042      1052      1062      1072      1082      1092      1102      1112      1122      1132      1142      1152      1162      1172

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

Classification and Annotation

SCOP Domains (0, 0)

CATH Domains (0, 0)

Pfam Domains (0, 0)

Gene Ontology (4, 4)

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