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(-) Description

Title :  CRYSTAL STRUCTURE OF THE S. CEREVISIAE RTF1 HISTONE MODIFICATION DOMAIN MUTANT R124A R126A R128A
 
Authors :  A. D. Wier, A. Heroux, A. P. Vandemark
Date :  06 Nov 15  (Deposition) - 26 Oct 16  (Release) - 30 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.40
Chains :  Asym. Unit :  A,B
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Keywords :  Transcription, Paf1, Chromatin, Rtf1 (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  S. B. Van Oss, M. K. Shirra, A. R. Bataille, A. D. Wier, K. Yen, V. Vinayachandran, I. L. Byeon, C. E. Cucinotta, A. Heroux, J. Jeon, J. Kim, A. P. Vandemark, B. F. Pugh, K. M. Arndt
The Histone Modification Domain Of Paf1 Complex Subunit Rtf Directly Stimulates H2B Ubiquitylation Through An Interaction With Rad6.
Mol. Cell V. 64 815 2016
PubMed-ID: 27840029  |  Reference-DOI: 10.1016/J.MOLCEL.2016.10.008

(-) Compounds

Molecule 1 - RNA POLYMERASE-ASSOCIATED PROTEIN RTF1
    Chains: A, B
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 74-139
    Gene: RTF1, CSL3, YGL244W, HRA458
    Mutation: YES
    Organism Common: BAKER'S YEAST
    Organism Scientific: SACCHAROMYCES CEREVISIAE
    Organism Taxid: 559292
    Strain: ATCC 204508 / S288C

 Structural Features

(-) Chains, Units

  12
Asymmetric Unit : AB
Biological Unit 1 (1x): A 
Biological Unit 2 (1x):  B

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

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 Sequence-Structure Mapping

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(-) Sequences/Alignments

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Chain A from PDB  Type:PROTEIN  Length:53
                                                                                     
               SCOP domains ----------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------- Pfam domains
         Sec.struct. author ............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------- Transcript
                 5emx A  76 EANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFAAAGA 128
                                    85        95       105       115       125   


Chain B from PDB  Type:PROTEIN  Length:54
                                                                                      
               SCOP domains ------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------ Pfam domains
         Sec.struct. author .............hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------ Transcript
                 5emx B  75 EEANPFPLEGKYKDESDREHLESLPEMERETLLFERSQIMQKYQERKLFAAAGA 128
                                    84        94       104       114       124
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(-) Gene Ontology  (31, 31)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        RTF1_YEAST | P53064: 5e8b

(-) Related Entries Specified in the PDB File

5e8b 5E8B CONTAINS THE SAME PROTEIN WITH ONLY A SINGLE POINT MUTATION AT R126A.