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(-) Description

Title :  CRYSTAL STRUCTURE OF MOUSE TACO1
 
Authors :  H. Spahr, T. R. Richman, N. G. Larsson, O. Rackham, A. Filipovska
Date :  04 Nov 15  (Deposition) - 29 Jun 16  (Release) - 29 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.00
Chains :  Asym./Biol. Unit :  A
Keywords :  Oxidoreductase, Mitochondria, Rna Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. R. Richman, H. Spahr, J. A. Ermer, S. M. Davies, H. M. Viola, K. A. Bates, J. Papadimitriou, L. C. Hool, J. Rodger, N. G. Larsson, O. Rackham, A. Filipovska
Loss Of The Rna-Binding Protein Taco1 Causes Late-Onset Mitochondrial Dysfunction In Mice.
Nat Commun V. 7 11884 2016
PubMed-ID: 27319982  |  Reference-DOI: 10.1038/NCOMMS11884

(-) Compounds

Molecule 1 - TRANSLATIONAL ACTIVATOR OF CYTOCHROME C OXIDASE 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: TACO1, CCDC44
    Organism Common: HOUSE MOUSE
    Organism Scientific: MUS MUSCULUS
    Organism Taxid: 10090
    Synonym: COILED-COIL DOMAIN-CONTAINING PROTEIN 44,TRANSLATIONAL ACTIVATOR OF MITOCHONDRIALLY-ENCODED CYTOCHROME C OXIDASE 1

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5EKZ)

(-) Sites  (0, 0)

(no "Site" information available for 5EKZ)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EKZ)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Glu A:222 -Glu A:223

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EKZ)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

(no "Exon" information available for 5EKZ)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:221
                                                                                                                                                                                                                                                             
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhh..hhhhhhhhhh......eeeeeeee.....eeeeeeee.hhhhhhhhhhhhhhhh..ee.......eeeeeeeeee.........hhhhhhhhhhhhh..eeeeee.....eeeeeeee..hhhhhhhhhhhh...eeeeeeeeee......hhhhhhhhhhhhhhhhhh..eeeeee... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ekz A  74 RSRIFSKLTLSIRLAVKEGGPNPENNSSLANILELCRSKNMPKSTIESALKTEKNKGIYLLYEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGGMMAEGARHFFDKKGVVVVGVEDREKKAVNLERALELAIEAGAEDVKEAEDEEEKNLFKFICDASSLHQVRKKLDSLGLCPVSCSMEFIPHSKVQLAEPELEQAAHLIQALNNYEDVIHVYDNIE 294
                                    83        93       103       113       123       133       143       153       163       173       183       193       203       213       223       233       243       253       263       273       283       293
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EKZ)

(-) CATH Domains  (0, 0)

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(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (5, 5)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Glu A:222 - Glu A:223   [ RasMol ]  
 

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 Related Entries

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