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(-) Description

Title :  ECMEND-THDP-MN2+ COMPLEX SOAKED WITH 2-KETOGLUTARATE FOR 2 MIN AND ISOCHORISMATE FOR 13 MIN
 
Authors :  H. G. Song, C. Dong, Y. Z. Chen, Y. R. Sun, Z. H. Guo
Date :  01 Nov 15  (Deposition) - 01 Jun 16  (Release) - 29 Jun 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.72
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  E,F  (1x)
Biol. Unit 4:  G,H  (1x)
Keywords :  Post-Decarboxylation Intermediate, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. G. Song, C. Dong, M. M. Qin, Y. Z. Chen, Y. R. Sun, J. J. Liu, W. Chan, Z. H. Guo
A Thiamine-Dependent Enzyme Utilizes An Active Tetrahedral Intermediate In Vitamin K Biosynthesis
J. Am. Chem. Soc. V. 138 7244 2016
PubMed-ID: 27213829  |  Reference-DOI: 10.1021/JACS.6B03437

(-) Compounds

Molecule 1 - 2-SUCCINYL-5-ENOLPYRUVYL-6-HYDROXY-3-CYCLOHEXENE-1- CARBOXYLATE SYNTHASE
    Chains: A, B, C, D, E, F, G, H
    EC Number: 2.2.1.9
    Engineered: YES
    Expression System: ESCHERICHIA COLI BL21(DE3)
    Expression System Plasmid: PET28A
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Gene: MEND, B2264, JW5374
    Organism Scientific: ESCHERICHIA COLI K12
    Organism Taxid: 83333
    Strain: K12 SUBSTR. MG1655
    Synonym: THDP-DEPENDENT ENZYME MEND,SEPHCHC SYNTHASE,MENAQUINONE BIOSYNTHESIS PROTEIN MEND

 Structural Features

(-) Chains, Units

  12345678
Asymmetric Unit : ABCDEFGH
Biological Unit 1 (1x): AB      
Biological Unit 2 (1x):   CD    
Biological Unit 3 (1x):     EF  
Biological Unit 4 (1x):       GH

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 32)

Asymmetric Unit (4, 32)
No.NameCountTypeFull Name
1FMT8Ligand/IonFORMIC ACID
2GOL8Ligand/IonGLYCEROL
3MN8Ligand/IonMANGANESE (II) ION
4TPP8Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 1 (3, 6)
No.NameCountTypeFull Name
1FMT2Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4TPP2Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 2 (3, 6)
No.NameCountTypeFull Name
1FMT2Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4TPP2Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 3 (3, 6)
No.NameCountTypeFull Name
1FMT2Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4TPP2Ligand/IonTHIAMINE DIPHOSPHATE
Biological Unit 4 (3, 6)
No.NameCountTypeFull Name
1FMT2Ligand/IonFORMIC ACID
2GOL2Ligand/IonGLYCEROL
3MN-1Ligand/IonMANGANESE (II) ION
4TPP2Ligand/IonTHIAMINE DIPHOSPHATE

(-) Sites  (32, 32)

Asymmetric Unit (32, 32)
No.NameEvidenceResiduesDescription
01AC1SOFTWARESER A:391 , LEU A:392 , SER A:416 , GLY A:417 , ILE A:418 , ASP A:419 , GLY A:441 , ASP A:442 , LEU A:443 , SER A:444 , TYR A:447 , ASN A:469 , GLY A:471 , GLY A:472 , GLN A:473 , ILE A:474 , MN A:602 , HOH A:757 , HOH A:862 , HOH A:963 , PRO B:30 , GLU B:55 , THR B:81 , ALA B:82binding site for residue TPP A 601
02AC2SOFTWAREASP A:442 , ASN A:469 , GLY A:471 , TPP A:601 , HOH A:862binding site for residue MN A 602
03AC3SOFTWAREHIS A:49 , HIS A:50 , THR A:51 , ARG A:430 , LEU A:454 , HOH A:723 , HOH A:793 , HOH A:851binding site for residue GOL A 603
04AC4SOFTWAREGLY A:31 , SER A:32 , ARG A:33 , THR A:78 , ARG A:107 , GLN A:118 , HOH A:1078binding site for residue FMT A 604
05AC5SOFTWAREGLY B:31 , SER B:32 , ARG B:33 , THR B:78 , ARG B:107 , GLN B:118 , HOH B:1044binding site for residue FMT B 601
06AC6SOFTWAREPRO A:30 , GLU A:55 , THR A:81 , ALA A:82 , SER B:391 , LEU B:392 , SER B:416 , GLY B:417 , ILE B:418 , ASP B:419 , GLY B:441 , ASP B:442 , LEU B:443 , SER B:444 , TYR B:447 , ASN B:469 , GLY B:471 , GLY B:472 , GLN B:473 , ILE B:474 , MN B:603 , HOH B:767 , HOH B:832 , HOH B:1011binding site for residue TPP B 602
07AC7SOFTWAREASP B:442 , ASN B:469 , GLY B:471 , TPP B:602 , HOH B:767binding site for residue MN B 603
08AC8SOFTWAREHIS B:49 , HIS B:50 , THR B:51 , ARG B:430 , LEU B:454 , HOH B:750 , HOH B:769 , HOH B:994binding site for residue GOL B 604
09AC9SOFTWARESER C:391 , LEU C:392 , SER C:416 , GLY C:417 , ILE C:418 , ASP C:419 , GLY C:441 , ASP C:442 , LEU C:443 , SER C:444 , TYR C:447 , ASN C:469 , GLY C:471 , GLY C:472 , GLN C:473 , ILE C:474 , MN C:602 , HOH C:836 , HOH C:850 , HOH C:927 , PRO D:30 , GLU D:55 , THR D:81 , ALA D:82 , HOH D:707binding site for residue TPP C 601
10AD1SOFTWAREASP C:442 , ASN C:469 , GLY C:471 , TPP C:601 , HOH C:836binding site for residue MN C 602
11AD2SOFTWAREHIS C:49 , HIS C:50 , THR C:51 , ARG C:430 , LEU C:454 , HOH C:711 , HOH C:728 , HOH D:815binding site for residue GOL C 603
12AD3SOFTWAREGLY C:31 , SER C:32 , ARG C:33 , THR C:78 , ARG C:107 , GLN C:118 , HOH C:996binding site for residue FMT C 604
13AD4SOFTWAREGLY D:31 , SER D:32 , ARG D:33 , THR D:78 , ARG D:107 , GLN D:118 , HOH D:977binding site for residue FMT D 601
14AD5SOFTWAREPRO C:30 , GLU C:55 , THR C:81 , ALA C:82 , SER D:391 , LEU D:392 , SER D:416 , GLY D:417 , ILE D:418 , ASP D:419 , GLY D:441 , ASP D:442 , LEU D:443 , SER D:444 , ASN D:469 , GLY D:471 , GLY D:472 , GLN D:473 , ILE D:474 , MN D:603 , HOH D:820 , HOH D:832 , HOH D:904binding site for residue TPP D 602
15AD6SOFTWAREASP D:442 , ASN D:469 , GLY D:471 , TPP D:602 , HOH D:820binding site for residue MN D 603
16AD7SOFTWAREHIS D:49 , HIS D:50 , THR D:51 , ARG D:430 , LEU D:454 , HOH D:735 , HOH D:739 , HOH D:766binding site for residue GOL D 604
17AD8SOFTWARESER E:391 , LEU E:392 , SER E:416 , GLY E:417 , ILE E:418 , ASP E:419 , GLY E:441 , ASP E:442 , LEU E:443 , SER E:444 , TYR E:447 , ASN E:469 , GLY E:471 , GLY E:472 , GLN E:473 , ILE E:474 , MN E:602 , HOH E:755 , HOH E:831 , HOH E:1021 , PRO F:30 , GLU F:55 , THR F:81 , ALA F:82 , HOH F:703binding site for residue TPP E 601
18AD9SOFTWAREASP E:442 , ASN E:469 , GLY E:471 , TPP E:601 , HOH E:831binding site for residue MN E 602
19AE1SOFTWAREHIS E:49 , HIS E:50 , THR E:51 , ARG E:430 , LEU E:454 , GLN E:457 , HOH E:722 , HOH E:775 , HOH E:950binding site for residue GOL E 603
20AE2SOFTWAREGLY E:31 , SER E:32 , ARG E:33 , THR E:78 , ARG E:107 , GLN E:118 , HOH E:959 , HOH E:1060binding site for residue FMT E 604
21AE3SOFTWAREGLY F:31 , SER F:32 , ARG F:33 , THR F:78 , ARG F:107 , GLN F:118 , HOH F:1045binding site for residue FMT F 601
22AE4SOFTWAREPRO E:30 , GLU E:55 , THR E:81 , SER F:391 , LEU F:392 , SER F:416 , GLY F:417 , ILE F:418 , ASP F:419 , GLY F:441 , ASP F:442 , LEU F:443 , SER F:444 , ASN F:469 , GLY F:471 , GLY F:472 , GLN F:473 , ILE F:474 , MN F:603 , HOH F:783 , HOH F:824 , HOH F:993binding site for residue TPP F 602
23AE5SOFTWAREASP F:442 , ASN F:469 , GLY F:471 , TPP F:602 , HOH F:824binding site for residue MN F 603
24AE6SOFTWAREHOH E:910 , HIS F:49 , HIS F:50 , THR F:51 , ARG F:430 , LEU F:454 , GLN F:457 , HOH F:806 , HOH F:817binding site for residue GOL F 604
25AE7SOFTWARESER G:391 , LEU G:392 , SER G:416 , GLY G:417 , ILE G:418 , ASP G:419 , GLY G:441 , ASP G:442 , LEU G:443 , SER G:444 , ASN G:469 , GLY G:471 , GLY G:472 , GLN G:473 , ILE G:474 , MN G:602 , HOH G:765 , HOH G:809 , HOH G:975 , PRO H:30 , GLU H:55 , THR H:81 , ALA H:82binding site for residue TPP G 601
26AE8SOFTWAREASP G:442 , ASN G:469 , GLY G:471 , TPP G:601 , HOH G:765binding site for residue MN G 602
27AE9SOFTWAREHIS G:49 , HIS G:50 , THR G:51 , ARG G:430 , LEU G:454 , GLN G:457 , HOH G:738 , HOH G:740 , HOH G:1052binding site for residue GOL G 603
28AF1SOFTWAREGLY G:31 , SER G:32 , ARG G:33 , THR G:78 , ARG G:107 , GLN G:118 , HOH G:1043 , HOH G:1118binding site for residue FMT G 604
29AF2SOFTWAREGLY H:31 , SER H:32 , ARG H:33 , THR H:78 , ARG H:107 , GLN H:118 , HOH H:719 , HOH H:859binding site for residue FMT H 601
30AF3SOFTWAREPRO G:30 , GLU G:55 , THR G:81 , ALA G:82 , SER H:391 , LEU H:392 , SER H:416 , GLY H:417 , ILE H:418 , ASP H:419 , GLY H:441 , ASP H:442 , LEU H:443 , SER H:444 , TYR H:447 , ASN H:469 , GLY H:471 , GLY H:472 , GLN H:473 , ILE H:474 , MN H:603 , HOH H:834 , HOH H:897 , HOH H:1015binding site for residue TPP H 602
31AF4SOFTWAREASP H:442 , ASN H:469 , GLY H:471 , TPP H:602 , HOH H:834binding site for residue MN H 603
32AF5SOFTWAREHIS H:49 , HIS H:50 , THR H:51 , ARG H:430 , LEU H:454 , GLN H:457 , HOH H:725 , HOH H:789 , HOH H:792binding site for residue GOL H 604

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EJ9)

(-) Cis Peptide Bonds  (8, 8)

Asymmetric Unit
No.Residues
1Glu A:172 -Pro A:173
2Glu B:172 -Pro B:173
3Glu C:172 -Pro C:173
4Glu D:172 -Pro D:173
5Glu E:172 -Pro E:173
6Glu F:172 -Pro F:173
7Glu G:172 -Pro G:173
8Glu H:172 -Pro H:173

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EJ9)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EJ9)

(-) Exons   (0, 0)

(no "Exon" information available for 5EJ9)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhh..hhhhhh.....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 A   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
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Chain B from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhhh....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 B   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550      


Chain C from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 C   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550      


Chain D from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 D   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
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Chain E from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 E   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
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Chain F from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 F   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
                                    10        20        30        40        50        60        70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270       280       290       300       310       320       330       340       350       360       370       380       390       400       410       420       430       440       450       460       470       480       490       500       510       520       530       540       550      


Chain G from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 G   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
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Chain H from PDB  Type:PROTEIN  Length:556
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhhhh....eeee.....hhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhh..eeeeeee.hhhhh...................eeee........hhhhhhhhhhhhhhh.....eeeeee............hhhhhhhhhhhhhh....ee...eee.....hhhhhh...eeeee...hhhhhhhhhhhhhhhh..eee...........hhhhhh.hhhhhhhhh...eeeee.....hhhhhhhhhhh...eeeeee............eeeee.hhhhhhhhh.........hhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh....eeee..hhhhhhhhhhh.......ee.........hhhhhhhhhhhhhh..eeeeeehhhhhhhhhhhhhhhh....eeeeeee....hhhhhh..hhhhhhhhh.......hhhhhhhh..eee...hhhhhhhhhhhhh....eeeeeee...hhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5ej9 H   1 MSVSAFNRRWAAVILEALTRHGVRHICIAPGSRSTPLTLAAAENSAFIHHTHFDERGLGHLALGLAKVSKQPVAVIVTSGTAVANLYPALIEAGLTGEKLILLTADRPPELIDCGANQAIRQPGMFASHPTHSISLPRPTQDIPARWLVSTIDHALGTLHAGGVHINCPFAEPLYGEMDDTGLSWQQRLGDWWQDDKPWLREAPRLESEKQRDWFFWRQKRGVVVAGRMSAEEGKKVALWAQTLGWPLIGDVLSQTGQPLPCADLWLGNAKATSELQQAQIVVQLGSSLTGKRLLQWQASCEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELHPAEKRQPWCVEIPRLAEQAMQAVIARRDAFGEAQLAHRICDYLPEQGQLFVGNSLVVRLIDALSQLPAGYPVYSNRGASGIDGLLSTAAGVQRASGKPTLAIVGDLSALYDLNALALLRQVSAPLVLIVVNNNGGQIFSLLPTPQSERERFYLMPQNVHFEHAAAMFELKYHRPQNWQELETAFADAWRTPTTTVIEMVVNDTDGAQTLQQLLAQVSHL 556
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 Related Entries

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        MEND_ECOLI | P17109: 2jla 2jlc 3flm 3hww 3hwx 5ej4 5ej5 5ej6 5ej7 5ej8 5eja 5ejm

(-) Related Entries Specified in the PDB File

5ej4 5ej5 5ej6 5ej7 5ej8 5eja 5ejm