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(-) Description

Title :  CRYSTAL STRUCTURE OF HUMAN NUCLEOPHOSMIN-CORE IN COMPLEX WITH CYTOCHROME C
 
Authors :  N. Bernardo-Garcia, J. A. Hermoso, K. Gonzalez-Arzola, I. Diaz-Moren La Rosa
Date :  28 Oct 15  (Deposition) - 09 Nov 16  (Release) - 09 Nov 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.55
Chains :  Asym. Unit :  A,B,C,D,E,F,G,H,I,J,a,b,c,d,e,f,g,h,i,j
Biol. Unit 1:  A,B,C,D,E  (1x)
Biol. Unit 2:  F,G,H,I,J  (1x)
Biol. Unit 3:  a,b,c,d,e  (1x)
Biol. Unit 4:  f,g,h,i,j  (1x)
Keywords :  Nucleolus, Histone Assembly, Citochrome C, Apoptosis, Oxidoreductase (Keyword Search: [Gene Ontology, PubMed, Web (Google))
 
Reference :  N. Bernardo-Garcia, J. A. Hermoso, K. Gonzalez-Arzola, I. Diaz-Moreno, M. A. De La Rosa
Crystal Structure Of Human Nucleophosmin-Core In Complex With Cytochrome C
To Be Published
PubMed: search

(-) Compounds

Molecule 1 - NUCLEOPHOSMIN
    ChainsA, B, C, D, E, F, G, H, I, J, a, b, c, d, e, f, g, h, i, j
    EngineeredYES
    Expression SystemESCHERICHIA COLI BL21(DE3)
    Expression System PlasmidPET21A
    Expression System Taxid469008
    Expression System Vector TypePLASMID
    GeneNPM1, NPM
    Organism CommonHUMAN
    Organism ScientificHOMO SAPIENS
    Organism Taxid9606
    SynonymNPM,NUCLEOLAR PHOSPHOPROTEIN B23,NUCLEOLAR PROTEIN NO38, NUMATRIN

 Structural Features

(-) Chains, Units

  1234567891011121314151617181920
Asymmetric Unit ABCDEFGHIJabcdefghij
Biological Unit 1 (1x)ABCDE               
Biological Unit 2 (1x)     FGHIJ          
Biological Unit 3 (1x)          abcde     
Biological Unit 4 (1x)               fghij

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 4)

Asymmetric Unit (1, 4)
No.NameCountTypeFull Name
1CL4Ligand/IonCHLORIDE ION
Biological Unit 1 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 2 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 3 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION
Biological Unit 4 (0, 0)
No.NameCountTypeFull Name
1CL-1Ligand/IonCHLORIDE ION

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREVAL H:83binding site for residue CL G 201
2AC2SOFTWAREVAL f:83 , VAL j:83binding site for residue CL f 201

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5EHD)

(-) Cis Peptide Bonds  (50, 50)

Asymmetric Unit
No.Residues
1Pro A:96 -Pro A:97
2Gly A:107 -Pro A:108
3Phe B:31 -Lys B:32
4Pro B:96 -Pro B:97
5Gly B:107 -Pro B:108
6Pro C:96 -Pro C:97
7Gly C:107 -Pro C:108
8Pro D:96 -Pro D:97
9Gly D:107 -Pro D:108
10Pro E:96 -Pro E:97
11Gly E:107 -Pro E:108
12Pro F:96 -Pro F:97
13Gly F:107 -Pro F:108
14Pro G:96 -Pro G:97
15Gly G:107 -Pro G:108
16Lys H:32 -Val H:33
17Pro H:96 -Pro H:97
18Gly H:107 -Pro H:108
19Pro I:96 -Pro I:97
20Gly I:107 -Pro I:108
21Pro J:96 -Pro J:97
22Gly J:107 -Pro J:108
23Pro a:96 -Pro a:97
24Gly a:107 -Pro a:108
25Pro b:96 -Pro b:97
26Gly b:107 -Pro b:108
27Lys c:32 -Val c:33
28Asn c:35 -Asp c:36
29Pro c:96 -Pro c:97
30Gly c:107 -Pro c:108
31Arg d:13 -Pro d:14
32Pro d:96 -Pro d:97
33Gly d:107 -Pro d:108
34Ala d:118 -Val d:119
35Pro e:96 -Pro e:97
36Gly e:107 -Pro e:108
37Pro f:96 -Pro f:97
38Gly f:107 -Pro f:108
39Lys g:32 -Val g:33
40Pro g:96 -Pro g:97
41Gly g:107 -Pro g:108
42Pro h:96 -Pro h:97
43Gly h:107 -Pro h:108
44Val i:33 -Asp i:34
45Glu i:37 -Asn i:38
46Pro i:96 -Pro i:97
47Gly i:107 -Pro i:108
48Phe j:31 -Lys j:32
49Pro j:96 -Pro j:97
50Gly j:107 -Pro j:108

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5EHD)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5EHD)

(-) Exons   (0, 0)

(no "Exon" information available for 5EHD)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it)
Chain A from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd A  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain B from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd B  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     

Chain C from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd C  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain D from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd D  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     

Chain E from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeee.....eee.........eeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeee... Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd E  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain F from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd F  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain G from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd G  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain H from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee.........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd H  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain I from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd I  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain J from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd J  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAVE 120
                                    23        33        43        53        63        73        83        93       103       113       

Chain a from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd a  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain b from PDB  Type:PROTEIN  Length:105
                                                                                                                                         
               SCOP domains --------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------- Transcript
                 5ehd b  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    23        33        43        53        63        73        83        93       103       113     

Chain c from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd c  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain d from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd d  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain e from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....ee........eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee....eeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd e  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain f from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd f  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain g from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd g  14 PQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    23        33        43        53        63        73        83        93       103       113      

Chain h from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd h  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    22        32        42        52        62        72        82        92       102       112      

Chain i from PDB  Type:PROTEIN  Length:107
                                                                                                                                           
               SCOP domains ----------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..eeeeeeeee.....eee.......eeeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------- Transcript
                 5ehd i  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVAV 119
                                    22        32        42        52        62        72        82        92       102       112       

Chain j from PDB  Type:PROTEIN  Length:106
                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...eeeeeeee.....eee........eeeeeeeeee........eeeeeeee.....eeeeeeeee......eeeeeeeee...eeeeeee....eeeeeeeee. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------- Transcript
                 5ehd j  13 RPQNYLFGCELKADKDYHFKVDNDENEHQLSLRTVSLGAGAKDELHIVEAEAMNYEGSPIKVTLATLKMSVQPTVSLGGFEITPPVVLRLKCGSGPVHISGQHLVA 118
                                    22        32        42        52        62        72        82        92       102       112      

   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5EHD)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5EHD)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5EHD)

(-) Gene Ontology  (53, 53)

Asymmetric Unit(hide GO term definitions)

 Visualization

(-) Interactive Views

Asymmetric Unit
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  Ligands, Modified Residues, Ions
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  Cis Peptide Bonds
    Ala d:118 - Val d:119   [ RasMol ]  
    Arg d:13 - Pro d:14   [ RasMol ]  
    Asn c:35 - Asp c:36   [ RasMol ]  
    Glu i:37 - Asn i:38   [ RasMol ]  
    Gly A:107 - Pro A:108   [ RasMol ]  
    Gly B:107 - Pro B:108   [ RasMol ]  
    Gly C:107 - Pro C:108   [ RasMol ]  
    Gly D:107 - Pro D:108   [ RasMol ]  
    Gly E:107 - Pro E:108   [ RasMol ]  
    Gly F:107 - Pro F:108   [ RasMol ]  
    Gly G:107 - Pro G:108   [ RasMol ]  
    Gly H:107 - Pro H:108   [ RasMol ]  
    Gly I:107 - Pro I:108   [ RasMol ]  
    Gly J:107 - Pro J:108   [ RasMol ]  
    Gly a:107 - Pro a:108   [ RasMol ]  
    Gly b:107 - Pro b:108   [ RasMol ]  
    Gly c:107 - Pro c:108   [ RasMol ]  
    Gly d:107 - Pro d:108   [ RasMol ]  
    Gly e:107 - Pro e:108   [ RasMol ]  
    Gly f:107 - Pro f:108   [ RasMol ]  
    Gly g:107 - Pro g:108   [ RasMol ]  
    Gly h:107 - Pro h:108   [ RasMol ]  
    Gly i:107 - Pro i:108   [ RasMol ]  
    Gly j:107 - Pro j:108   [ RasMol ]  
    Lys H:32 - Val H:33   [ RasMol ]  
    Lys c:32 - Val c:33   [ RasMol ]  
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 Related Entries

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        NPM_HUMAN | P067482llh 2p1b 2vxd

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