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(-) Description

Title :  CRYSTAL STRUCTURE OF MYROILYSIN
 
Authors :  J. Zhou, T. Ran, D. Xu, W. Wang
Date :  01 Aug 15  (Deposition) - 03 Aug 16  (Release) - 26 Apr 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.60
Chains :  Asym./Biol. Unit :  A
Keywords :  Propeptide, Inhibition, Protease, Hydrolase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  D. Xu, J. Zhou, X. Lou, J. He, T. Ran, W. Wang
Myroilysin Is A New Bacterial Member Of The M12A Family Of Metzincin Metallopeptidases And Activated By A Cysteine-Switch Mechanism
J. Biol. Chem. V. 292 5195 2017
PubMed-ID: 28188295  |  Reference-DOI: 10.1074/JBC.M116.758110

(-) Compounds

Molecule 1 - MYROILYSIN
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 35-272
    Gene: MPR_2201
    Organism Scientific: MYROIDES PROFUNDI
    Organism Taxid: 480520

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 6)

Asymmetric/Biological Unit (2, 6)
No.NameCountTypeFull Name
1MLY5Mod. Amino AcidN-DIMETHYL-LYSINE
2ZN1Ligand/IonZINC ION

(-) Sites  (0, 0)

(no "Site" information available for 5CZW)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CZW)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1Tyr A:175 -Pro A:176

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CZW)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5CZW)

(-) Exons   (0, 0)

(no "Exon" information available for 5CZW)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:229
                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ......................................eeeeeee..hhhhhhhhhhhhhhhhhh...eeee.......eeee.......ee.hhhhhhhh......ee........hhhhhhhhhhhhhhhhhh..............hhhhhhhhhh......hhhhhhhhh.hhhhh..................hhhhh............hhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5czw A   6 GLKELRAVPKADIVSGFEGAkVCKDVYPKGSTkWPNGSVITVGLYGGTPYVRSKVkQYAQEWSNYANITFNFVESGTPQIRVTFTQGAGSYSYLGTQALSIPSNEETMNFGWFDDSTSDTEFSRTVIHEFGHALGMIHEHQHPLTNIPWDKNKVYAYYAGYPNYWSkKDVDNNLFATYSTTQTQYSAYDTQSIMHYSISSALTTNGFSVGNNSVLSATDkQFIATVYPR 243
                                    15        25|       35| |     54        64     |  74        84        94       104       114       124       134       144       154       164       174      |184       194       204       214       224       234         
                                               26-MLY   35| |                     70-MLY                                                                                                        181-MLY                                              234-MLY     
                                                         45 |                                                                                                                                                                                                    
                                                           47-MLY
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CZW)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CZW)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5CZW)

(-) Gene Ontology  (4, 4)

Asymmetric/Biological Unit(hide GO term definitions)

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  Cis Peptide Bonds
    Tyr A:175 - Pro A:176   [ RasMol ]  
 

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