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(-) Description

Title :  STRUCTURE OF THE SOLUBLE DOMAIN OF ECCB1 FROM THE MYCOBACTERIUM SMEGMATIS ESX-1 SECRETION SYSTEM.
 
Authors :  M. A. Arbing, S. Chan, S. Kahng, J. Kim, D. S. Eisenberg, Tb Structural Consortium (Tbsgc)
Date :  30 Jul 15  (Deposition) - 12 Aug 15  (Release) - 27 Jul 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.07
Chains :  Asym./Biol. Unit :  A
Keywords :  Membrane Protein, Virulence, Protein Secretion, Mycobacteria, Structural Genomics, Psi-2, Protein Structure Initiative, Tb Structural Genomics Consortium, Tbsgc (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. M. Wagner, S. Chan, T. J. Evans, S. Kahng, J. Kim, M. A. Arbing, D. Eisenberg, K. V. Korotkov
Structures Of Eccb1 And Eccd1 From The Core Complex Of The Mycobacterial Esx-1 Type Vii Secretion System.
Bmc Struct. Biol. V. 16 5 2016
PubMed-ID: 26922638  |  Reference-DOI: 10.1186/S12900-016-0056-6

(-) Compounds

Molecule 1 - CONSERVED MEMBRANE PROTEIN
    Atcc: 700084
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PMAPLE4
    Expression System Strain: BL21(DE3)
    Expression System Taxid: 469008
    Expression System Vector Type: PLASMID
    Fragment: UNP RESIDUES 73-479
    Gene: MSMEG_0060, MSMEI_0061
    Organism Scientific: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / MC(2)155)
    Organism Taxid: 246196
    Strain: ATCC 700084 / MC(2)155
    Synonym: UNCHARACTERIZED PROTEIN

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5CYU)

(-) Sites  (0, 0)

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(-) SS Bonds  (1, 1)

Asymmetric/Biological Unit
No.Residues
1A:152 -A:347

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

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(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:378
                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .eee......eee....ee.hhhhhhhhh..........hhhhh.......................eeeeeee...........eeeeee........eee....eeeeee....eeeee..eeee....hhhhhhhhh.......ee.hhhhhhhh..............................eeee.....eeeee..eeeeehhhhhhhhhhhh........ee..hhhhhh..............eee......eeeeeee........eeeeeee.....hhhhh...ee.....eeeee...eeeeee.......eeeeee....eeeee.hhhhhhhh.....ee.hhhhhh..eeeeee....... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5cyu A  75 QLLVDRTTNQLYVMLPRPVYNLTSARLVLGNASNPVAVSEELNRISKGQSIGIPGAPYATPTGTPASQWTLCDTVAKPDSSAPKVETSILIRTLAIDSGVGPIRADQGMLVSYEGANWLITEGGRHSIDLADRAVTSAVGIPVTAKPTPISQGLFNALPNRGPWQLPQIPAAGAPNSVGLPENLVIGSVFRTASDPQHYVVLPDGVARVNNTTAAALRATNSYGLMQPPAVEASVVAKIPEQVYVSPLPDQPLDVLLRQDSPVLCWSWQREPGDQAPKTTVIAGRRLPLPANAIGTGIDQIGGDSTVYIEGGQFVRLQSPDPRVGESMYYIDPQGVRYGIANDDAAKNLGLAGPVNAPWQVVGLLVDGPVLSKEAALI 460
                                    84     || 99       109       120       130       140       150       160       170       180       190       200       210       220       230       240       250       260       270  ||   282       292       302       312       322       332       342       352       362       372       382       392       402       412       422       432       442       452        
                                          90|                  117|                                                                                                                                                       273|                                                                                                                                                                                        
                                           96                   119                                                                                                                                                        276
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CYU)

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(-) Gene Ontology  (2, 2)

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  ECCB1_MYCS2 | A0QNJ0
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