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(-) Description

Title :  DIMERIZATION OF ELP1 IS ESSENTIAL FOR ELONGATOR COMPLEX ASSEMBLY
 
Authors :  Z. Lin, H. Xu, F. Li, W. Diao, J. Long, Y. Shen
Date :  22 Jul 15  (Deposition) - 19 Aug 15  (Release) - 16 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.02
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (2x)
Keywords :  Familial Dysautonomia, Elongator Complex, Elp1 Subunit, Dimerization, Protein Binding (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  H. Xu, Z. Lin, F. Li, W. Diao, C. Dong, H. Zhou, X. Xie, Z. Wang, Y. Shen, J. Long
Dimerization Of Elongator Protein 1 Is Essential For Elongator Complex Assembly.
Proc. Natl. Acad. Sci. Usa V. 112 10697 2015
PubMed-ID: 26261306  |  Reference-DOI: 10.1073/PNAS.1502597112

(-) Compounds

Molecule 1 - ELONGATOR COMPLEX PROTEIN 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Fragment: UNP RESIDUES 715-1332
    Gene: IKBKAP, ELP1, IKAP
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: ELP1,IKAPPAB KINASE COMPLEX-ASSOCIATED PROTEIN,IKK COMPLEX- ASSOCIATED PROTEIN,P150

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5CQR)

(-) Sites  (0, 0)

(no "Site" information available for 5CQR)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CQR)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Ala A:865 -Pro A:866

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CQR)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5CQR)

(-) Exons   (0, 0)

(no "Exon" information available for 5CQR)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:455
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        
               SCOP domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..hhhhhhhhhhhhhh.hhhhhhhhhhhh....hhhhhhhhhhhh.hhhhhhhhh.hhhhhhhhhhhh................hhhhhhhhhhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhhhhh.....hhhhh.hhhhhhhhhhh..hhhhhhhhhh...hhhhhhhhhhh....hhhhhhhhh..hhhhhhhhhhhhh.hhhhhhhhhh.....hhhhhhhhhhhh.hhhhhhh.....hhhhhhhhhhhhhhhhh..hhhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhhh...hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...........hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh............... Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                5cqr A  720 HHRALVLAQIRKWLDKLMFKEAFECMRKLRINLNLIYDHNPKVFLGNVETFIKQIDSVNHINLFFTELKEEDVTKTMYPAPPDGNKIDLVCDAMRAVMESINPHKYCLSILTSHVKKTTPELEIVLQKVHELQGNAPSDPDAVSAEEALKYLLHLVDVNELYDHSLGTYDFDLVLMVAEKSQKEYLPFLNTLKKMETNYQRFTIDKYLKRYEKAIGHLSKCGPEYFPECLNLIKDKNLYNEALKLYSPSSQQYQDISIAYGEHLMQEHMYEPAGLMFARCGAHEKALSAFLTCGNWKQALCVAAQLNFTKDQLVGLGRTLAGKLVEQRKHIDAAMVLEECAQDYEEAVLLLLEGAAWEEALRLVYKYNRLDIIETNVKPSILEAQKNYMAFLDSQTATFVVQNTENLKDEVYHILKVLFLFEFDEQGRELQKAFEDTLQLMERSNRRTQWKLSLL 1331
                                   729       739       749       759       769       779       789       799||     819       829       839       849       859       869       879       889       899       909 ||    922       932       942       952       962       972       982       992      1002      1012      1022      1032      1042      1052      1062      1072      1082      1092      1102      1112      1122      1225      1235      1245      1255      1265   || 1326     
                                                                                                          800|                                                                                                 911|                                                                                                                                                                                                                    1131|                                        1269|          
                                                                                                           811                                                                                                  915                                                                                                                                                                                                                     1225                                         1321
   Legend:   → Mismatch (orange background)
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CQR)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CQR)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5CQR)

(-) Gene Ontology  (21, 21)

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    Ala A:865 - Pro A:866   [ RasMol ]  
 
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  5cqr
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5cqs