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(-) Description

Title :  CRYSTAL STRUCTURE OF TRANSCRIPTIONAL REGULATOR CDPR FROM PSEUDOMONAS AERUGINOSA
 
Authors :  J. R. Zhao, X. Yu, M. Zhu, H. P. Kang, W. N. Kong, J. B. Ma, X. Deng, J. H. Gan,
Date :  10 Jul 15  (Deposition) - 18 May 16  (Release) - 18 May 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.85
Chains :  Asym./Biol. Unit :  A
Keywords :  Quorum-Sensing, Atp-Dependent Protease, Protein Degradation, Bacterial Virulence, Transcription (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. R. Zhao, X. Yu, M. Zhu, H. P. Kang, J. B. Ma, M. Wu, J. H. Gan, X. Deng, H. H. Liang
Structural And Molecular Mechanism Of Cdpr Involved In Quorum-Sensing And Bacterial Virulence In Pseudomonas Aeruginosa
Plos Biol. V. 14 02449 2016
PubMed-ID: 27119725  |  Reference-DOI: 10.1371/JOURNAL.PBIO.1002449

(-) Compounds

Molecule 1 - ARAC FAMILY TRANSCRIPTIONAL REGULATOR
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Taxid: 562
    Gene: APPY_1, ERS445055_02463, PA8380_27050, PAE221_02417, YQ19_15205
    Organism Scientific: PSEUDOMONAS AERUGINOSA
    Organism Taxid: 287
    Synonym: PSEUDOMONAS AERUGINOSA GENOME ASSEMBLY PAE221,PUTATIVE TRANSCRIPTIONAL REGULATOR NEAR PQSH

 Structural Features

(-) Chains, Units

  1
Asymmetric/Biological Unit : A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 3)

Asymmetric/Biological Unit (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 5CHH)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5CHH)

(-) Cis Peptide Bonds  (0, 0)

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 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5CHH)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5CHH)

(-) Exons   (0, 0)

(no "Exon" information available for 5CHH)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:315
                                                                                                                                                                                                                                                                                                                                                           
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh......hhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhh........eeeeeeee....eeeeeeee......hhhhhhhhhhhhhhhhhhhhhhhh.......eeee......hhhhhhhhh..eee....eeeeee.hhhhh.....hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhh.....hhhhhhhhh..hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhh.....hhhhhhhhh...hhhhhhhhhhhhhh.hhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5chh A   5 ENIQYDFEWRPLNNYLAVQRITPPRLPSEALYEWIVLNGRSPLEGLSLGEHYRLSDYGVAGLALQSAGTVGEALQLIKTNmLLFRKDIRGIAVRRSSCDTVDVDIDLQDKPDWPQSARLYHANVLASAAYAVFRDLLLGELELVRLRLPERNGDVRAYEEYFRVPVYFAGAGITFTLPEELLEAEIATANSAVFQASLALGSKAFNTRVTREmGGYRQRIVALLEVLQDRYPSIAWVARQLKVTERTLRRRLADEGTNYREVLDLVRHDRARQLLRDERLRIEEVAERLGYmDTSSFRHAFRRWTGQCANDYRQA 329
                                    14        24   ||   44        54        64        74        84        94|      104       114       124       134       144       154       164       174       184       194       204       214       224  |    234       244       254       264       274       284       294       304 |     314       324     
                                                  28|                                                      95-MSE                                                                                                                             227-MSE                                                                        306-MSE                   
                                                   39
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5CHH)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5CHH)

(-) Pfam Domains  (0, 0)

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(-) Gene Ontology  (9, 9)

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