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(-) Description

Title :  SCHISTOSOMA MANSONI (BLOOD FLUKE) SULFOTRANSFERASE/S-OXAMNIQUINE COMPLEX
 
Authors :  A. B. Taylor, X. Cao, S. P. Holloway, P. J. Hart
Date :  10 Jun 15  (Deposition) - 30 Sep 15  (Release) - 18 Nov 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.28
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  A  (2x)
Keywords :  Sulfotransferase, Parasite, Oxamniquine, Drug Resistance, Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  A. B. Taylor, L. Pica-Mattoccia, C. M. Polcaro, E. Donati, X. Cao, A. Basso, A. Guidi, A. R. Rugel, S. P. Holloway, T. J. Anderson, P. J. Hart, D. Cioli, P. T. Loverde
Structural And Functional Characterization Of The Enantiomers Of The Antischistosomal Drug Oxamniquine.
Plos Negl Trop Dis V. 9 04132 2015
PubMed-ID: 26485649  |  Reference-DOI: 10.1371/JOURNAL.PNTD.0004132

(-) Compounds

Molecule 1 - SULFOTRANSFERASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PAG8H
    Expression System Strain: BL21 PLYSS
    Expression System Taxid: 511693
    Expression System Vector Type: PLASMID
    Gene: SMP_089320
    Organism Common: BLOOD FLUKE
    Organism Scientific: SCHISTOSOMA MANSONI
    Organism Taxid: 6183

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (1x): A
Biological Unit 2 (2x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (4, 4)

Asymmetric Unit (4, 4)
No.NameCountTypeFull Name
1A3P1Ligand/IonADENOSINE-3'-5'-DIPHOSPHATE
2CAS1Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3NA1Ligand/IonSODIUM ION
4OAQ1Ligand/Ion{(2S)-7-NITRO-2-[(PROPAN-2-YLAMINO)METHYL]-1,2,3,4-TETRAHYDROQUINOLIN-6-YL}METHANOL
Biological Unit 1 (3, 3)
No.NameCountTypeFull Name
1A3P1Ligand/IonADENOSINE-3'-5'-DIPHOSPHATE
2CAS1Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3NA-1Ligand/IonSODIUM ION
4OAQ1Ligand/Ion{(2S)-7-NITRO-2-[(PROPAN-2-YLAMINO)METHYL]-1,2,3,4-TETRAHYDROQUINOLIN-6-YL}METHANOL
Biological Unit 2 (3, 6)
No.NameCountTypeFull Name
1A3P2Ligand/IonADENOSINE-3'-5'-DIPHOSPHATE
2CAS2Mod. Amino AcidS-(DIMETHYLARSENIC)CYSTEINE
3NA-1Ligand/IonSODIUM ION
4OAQ2Ligand/Ion{(2S)-7-NITRO-2-[(PROPAN-2-YLAMINO)METHYL]-1,2,3,4-TETRAHYDROQUINOLIN-6-YL}METHANOL

(-) Sites  (3, 3)

Asymmetric Unit (3, 3)
No.NameEvidenceResiduesDescription
1AC1SOFTWAREARG A:17 , THR A:18 , GLY A:19 , THR A:20 , LYS A:21 , SER A:22 , ARG A:115 , SER A:123 , LEU A:203 , PRO A:225 , CAS A:226 , VAL A:227 , ASN A:228 , SER A:229 , HIS A:230 , HOH A:425 , HOH A:436 , HOH A:455 , HOH A:472 , HOH A:527 , HOH A:567 , HOH A:604binding site for residue A3P A 301
2AC2SOFTWAREPRO A:16 , MET A:38 , ASP A:91 , LEU A:92 , VAL A:127 , VAL A:128 , ASP A:144 , THR A:157 , MET A:233 , THR A:237 , HOH A:436 , HOH A:572binding site for residue OAQ A 302
3AC3SOFTWAREILE A:257 , HOH A:415 , HOH A:443 , HOH A:552 , HOH A:639 , HOH A:661 , HOH A:698binding site for residue NA A 303

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5BYK)

(-) Cis Peptide Bonds  (1, 1)

Asymmetric Unit
No.Residues
1Leu A:92 -Pro A:93

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5BYK)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5BYK)

(-) Exons   (0, 0)

(no "Exon" information available for 5BYK)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:254
                                                                                                                                                                                                                                                                                              
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...........eee......hhhhhhhhhhhhhh..eehhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh....ee....hhhhhhhhhhhh...eeeeee.hhhhhhhhhhhhh......hhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh.eeeee...hhhhhhhhh..............hhhhhhhhhhhhhhhh....hhhhh.... Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5byk A  -1 GAMIESSTTIQVISAGLPRTGTKSLKNALEIIYHKPCYHMFEIIFNKQSDIIKWQNLIHDSHMITTTKTIAIYDKLKELLDGYIATTDLPTCGFYKDLMNIYPNAKVLLTIRDKYDWLHSLRKVVLPKSNDPWKLKIEEGDKVLGLNSDFYKLTEDSLKFAFQKDDLNFDDDQVLLECYDEYNRLVQETVPSDRLLVLRLGDGWEPLCKFLNVEIPNGIDYPcVNSHHQMTQLTEQLIKYKSLDAIIHMFPDLI 257
                                     8        18        28        38        48        58    ||  73        83        93       103       113       123       133       143       153       163       173       183       193       203       213       223  |    233       243       253    
                                                                                           63|                                                                                                                                                          226-CAS                           
                                                                                            69
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5BYK)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5BYK)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5BYK)

(-) Gene Ontology  (0, 0)

Asymmetric Unit(hide GO term definitions)
    (no "Gene Ontology" information available for 5BYK)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/TrEMBL
        G4VLE5_SCHMA | G4VLE5: 4mua 4mub 5byj

(-) Related Entries Specified in the PDB File

5byj