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Title :  CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN, TTHA0829 FROM THERMUS THERMOPHILUS HB8, COMPOSED OF CYSTATHIONINE-BETA-SYNTHASE (CBS) AND ASPARTATE-KINASE CHORISMATE-MUTASE TYRA (ACT) DOMAINS
 
Authors :  M. Nakabayashi, N. Shibata, M. Kanagawa, N. Nakagawa, S. Kuramitsu, Y.
Date :  03 Jul 15  (Deposition) - 18 May 16  (Release) - 28 Sep 16  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.45
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (4x)
Keywords :  Hypothetical Protein, Thermus Thermophilus Hb8, Cbs Domain, Act Domain, Structural Genomics, Riken Structural Genomics/Proteomics Initiative, Rsgi, Unknown Function (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. Nakabayashi, N. Shibata, E. Ishido-Nakai, M. Kanagawa, Y. Iio, H. Komori, Y. Ueda, N. Nakagawa, S. Kuramitsu, Y. Higuchi
Crystal Structure Of A Hypothetical Protein, Ttha0829 From Thermus Thermophilus Hb8, Composed Of Cystathionine-Beta-Synthase (Cbs) And Aspartate-Kinase Chorismate-Mutase Tyra (Act) Domains.
Extremophiles V. 20 275 2016
PubMed-ID: 26936147  |  Reference-DOI: 10.1007/S00792-016-0817-Y

(-) Compounds

Molecule 1 - PUTATIVE ACETOIN UTILIZATION PROTEIN, ACETOIN DEHYDROGENASE
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PET11A
    Expression System Strain: B834 (DE3)
    Expression System Taxid: 562
    Expression System Vector Type: PLASMID
    Gene: TTHA0829
    Organism Scientific: THERMUS THERMOPHILUS
    Organism Taxid: 300852
    Strain: HB8 / ATCC 27634 / DSM 579

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (4x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 10)

Asymmetric Unit (1, 10)
No.NameCountTypeFull Name
1MSE10Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 40)
No.NameCountTypeFull Name
1MSE40Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

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(-) SS Bonds  (0, 0)

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(-) Cis Peptide Bonds  (2, 2)

Asymmetric Unit
No.Residues
1Arg A:83 -Pro A:84
2Pro A:162 -Pro A:163

 Sequence-Structure Mapping

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:205
                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .hhhhh.ee.........hhhhhhhhhhhhh..eeeeee..eeeeeeehhhhhh....hhhhhhhhhhhhhhhhh.......ee...hhhhhhhhhhhh...eeeeee..eeeeeeehhhhhhhhhhhh......eeeeeeee...hhhhhhhh.....eeeeeeeeeee..eeeeeeeee..hhhhhhhhhhhh..eeeeeee. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5awe A   1 mLVRDWmTKDPVVVAPDTPVLEAIRLLKEKGFRRLPVmEGGRLVGLVTDKDLKDAmPLSVWEmNYLLAKLTVREVmARPVVTVEADAPLEKAALLmEERKIGGLPVmEGERLVGIITVTDVLRAFIEVLGLKLGGLRITVDIPDVPGALAQmAQAVPPANIVSIATAAHLPGYQRLVmRVVGEDVEGVPKRLEAAGERVVDVRPG 210
                            |     | 10        20        30       |40        50     |||65  |     75     |  85        95     | 105      |115       125       135       145       155 |     165       175       185       195       205     
                            |     7-MSE                         38-MSE            56-MSE  |           81-MSE             101-MSE    112-MSE                                      157-MSE                   183-MSE                       
                            1-MSE                                                  57|    |                                                                                                                                              
                                                                                    63    |                                                                                                                                              
                                                                                         68-MSE
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 Classification and Annotation

(-) SCOP Domains  (0, 0)

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(-) CATH Domains  (0, 0)

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(-) Gene Ontology  (1, 1)

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(-) Related Entries Specified in the PDB File

3ddj CRYSTAL STRUCTURE OF CBS DOMAIN-CONTAINING PROTEIN IN COMPLEX WITH AMP (NP_344512.1) FROM SULFOLOBUS SOLFATARICUS AT 1.80 A RESOLUTION