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(-) Description

Title :  SOLUTION STRUCTURE OF THE SMARC DOMAIN
 
Authors :  M. D. Allen, S. M. V. Freund, G. Zinzalla, M. Bycroft
Date :  19 Feb 15  (Deposition) - 05 Aug 15  (Release) - 27 Apr 16  (Revision)
Method :  SOLUTION NMR
Resolution :  NOT APPLICABLE
Chains :  NMR Structure  :  A  (20x)
NMR Structure *:  A  (1x)
Keywords :  Structural Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. D. Allen, S. M. V. Freund, G. Zinzalla, M. Bycroft
The Swi/Snf Subunit Ini1 Contains An N-Terminal Winged Helix Dna Binding Domain That Is A Target For Mutations In Schwannomatosis.
Structure V. 23 1344 2015
PubMed-ID: 26073604  |  Reference-DOI: 10.1016/J.STR.2015.04.021

(-) Compounds

Molecule 1 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY B MEMBER 1
    Chains: A
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Strain: C41
    Expression System Taxid: 562
    Expression System Vector: MODIFIED PRSETA
    Expression System Vector Type: PLASMID
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Other Details: GGS AT THE N-TERMINUS RESULTS FROM A TEV CLEAVAGE SITE.
    Synonym: BRG1-ASSOCIATED FACTOR 47, BAF47, INTEGRASE INTERACTOR 1 PROTEIN, SNF5 HOMOLOG, HSNF5, SMARC B1 DOMAIN

 Structural Features

(-) Chains, Units

  1
NMR Structure (20x): A
NMR Structure * (1x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5AJ1)

(-) Sites  (0, 0)

(no "Site" information available for 5AJ1)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5AJ1)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5AJ1)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5AJ1)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5AJ1)

(-) Exons   (0, 0)

(no "Exon" information available for 5AJ1)

(-) Sequences/Alignments

NMR Structure
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:114
                                                                                                                                                  
               SCOP domains ------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author ................eee......eeeehhhhhhhhh...hhhhhhh....eee.hhhhhhhhhhhh.....................eeeehhhhhhhhhh.hhhhhh.... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------ Transcript
                 5aj1 A   0 GSMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERKKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSIS 113
                                     9        19        29        39        49        59        69        79        89        99       109
   Legend:   → Mismatch (orange background)
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  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5AJ1)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5AJ1)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5AJ1)

(-) Gene Ontology  (46, 46)

NMR Structure(hide GO term definitions)

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  5aj1
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  SNF5_HUMAN | Q12824
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        SNF5_HUMAN | Q12824: 5gjk 5l7a 5l7b

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5AJ1)