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(-) Description

Title :  CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF HUMAN DNA POLYMERASE THETA, APO-FORM
 
Authors :  J. A. Newman, C. D. O. Cooper, H. Aitkenhead, D. M. Pinkas, K. Kupinska, N. Burgess-Brown, F. Von Delft, C. H. Arrowsmith, A. Edwards, C. Boun O. Gileadi
Date :  21 Jul 15  (Deposition) - 16 Dec 15  (Release) - 16 Dec 15  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.55
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A  (1x)
Biol. Unit 2:  B  (1x)
Biol. Unit 3:  C  (1x)
Biol. Unit 4:  D  (1x)
Keywords :  Hydrolase, Polymerase, Helicase, Polq, Dna Repair (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. A. Newman, C. D. O. Cooper, H. Aitkenhead, O. Gileadi
Structure Of The Helicase Domain Of Dna Polymerase Theta Reveals A Possible Role In The Microhomology-Mediated End- Joining Pathway.
Structure V. 23 2319 2015
PubMed-ID: 26636256  |  Reference-DOI: 10.1016/J.STR.2015.10.014

(-) Compounds

Molecule 1 - DNA POLYMERASE THETA
    Chains: A, B, C, D
    Engineered: YES
    Expression System: SPODOPTERA FRUGIPERDA
    Expression System Cell Line: SF9
    Expression System Common: FALL ARMYWORM
    Expression System Taxid: 7108
    Expression System Vector Type: BACULOVIRUS
    Fragment: HELICASE DOMAIN, UNP RESIDUES 1-894
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: DNA POLYMERASE ETA

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): A   
Biological Unit 2 (1x):  B  
Biological Unit 3 (1x):   C 
Biological Unit 4 (1x):    D

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (0, 0)

(no "Ligand,Modified Residues,Ions" information available for 5A9J)

(-) Sites  (0, 0)

(no "Site" information available for 5A9J)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5A9J)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5A9J)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5A9J)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5A9J)

(-) Exons   (0, 0)

(no "Exon" information available for 5A9J)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:805
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .........hhhhhhhhhhhh.........hhhhh.hhhh..hhhhhhhhhh......hhhhhhhhhh.......eeeee.....hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhh..eeee........hhhhh.eeeehhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhh.eeeee.......eeeeeee..eee.....eeee............hhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhh...eeee....hhhhhhhhhhhhhh....eeeehhhhhh.......eeee...ee..ee.hhhhhhhhhh..........eeeeee....hhhhhhhhhh..................hhhhhhhhhhhhhh....hhhhhhhhhhhh..........hhhhhhhhhhhhhhh..eeee....eeeehhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhhhh..........hhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhh....hhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhh... Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a9j A  35 SGSVLSPPPGLGRCLKAAAAGECKPTVPDYERDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQCPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMKESVQLGAIEACVMWLLENEFIQSTEEGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVNMRTIWVTGRKGLTEREAAALIVEEARMILQQDLV 892
                                    44        54        64        74        84        94       104       114       124       134       144       154       164       174       184       194       204       214       224       234       244 ||    263       273       283       293       303       313       323       333       343       353       363   ||  382       392       402       412       422       432       442       452       462       472       482       492       502       512       522       532       542       552       562 ||    582       592      |607       617       627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       817       827       837|      867       877       887     
                                                                                                                                                                                                                                             246|                                                                                                            367|                                                                                                                                                                                        564|                     599|                                                                                                                                                                                                                                     837|                                  
                                                                                                                                                                                                                                              256                                                                                                             377                                                                                                                                                                                         575                      605                                                                                                                                                                                                                                      858                                  


Chain B from PDB  Type:PROTEIN  Length:801
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....hhhhhhhhhhh...............hhhh..hhhhhhhhhh......hhhhhhhhhh.......eeeee.....hhhhhhhhhhhhhhhhh..eeeee..hhhhhhhhhhhhhhhhhhhh..eeee........hhhhh.eeeehhhhhhhhhhhhhhhhhhh.eeeeee.hhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhh.eeeee.......eeeeeee..eeee....eeee............hhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhhhh..........hhhhhhhhhhhhhh.....hhhhhhhh...eeee....hhhhhhhhhhhhhh....eeeehhhhhh.......eeee...ee..ee.hhhhhhhhhh..........eeeeeee...hhhhhhhhhh..................hhhhhhhhhhhhhh....hhhhhhhhhhhh........hhhhhhhhhhhhhhh..eeee..eeeehhhhhhhhhhh.hhhhhhhhhhhhhhhh.......hhhhhhhh..........hhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhh....hhhhhhh.hhhhhhhhhhh...............hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a9j B  39 LSPPPGLGRCLKAAAAGCKPTVPDYERDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQKPSECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMSVQLGAIEACVMWLLENEFIQSTEKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVNMRTIWVTGRKGLTEREAAALIVEEARMILQQDLVE 893
                                    48      ||59        69        79        89        99       109       119       129       139       149       159       169       179       189       199       209       219       229       239      |258       268       278       288       298       308       318       328       338       348       358       373       383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563|      585       595   ||  612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832    || 862       872       882       892 
                                           55|                                                                                                                                                                                          246|                                                                                                            367|                                                                                                                                                                                           563|                    599|                                                                                                                                                                                                                                   837|                                   
                                            57                                                                                                                                                                                           256                                                                                                             373                                                                                                                                                                                            576                     607                                                                                                                                                                                                                                    858                                   


Chain C from PDB  Type:PROTEIN  Length:780
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Pfam domains
         Sec.struct. author .............hhhhh.hhhhhhhhhh......hhhhhhhhhh........eeee.....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhhhhhhh..eeee........hhhhh.eeeeehhhhhhhhhhhhhh.hhh.eeeeee.hhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhh..eeee.......eeeeeee..eee.....eeee............hhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhh.....hhhhhhhh...eeee....hhhhhhhhhhhhhh....eeeehhhhhh.......eeee...ee..ee.hhhhhhhhhh..........eeeeee....hhhhhhhhhh..................hhhhhhhhhhhhhh....hhhhhhhhhhhh.......hhhhhhhhhhhhhhhh..eeee..eeeehhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhhhh..........hhhhhhhhhhh.hhhhhhhhhhhh.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhh....hhhhhhh.hhhhhhhhhhh.................hhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ Transcript
                 5a9j C  35 SGSVLSPPPDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQAECPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMKVQLGAIEACVMWLLENEFIQSTEKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNAVPRNMRTIWVTGRKGLTEREAAALIVEEARMILQQD 890
                                    67        77        87        97       107       117       127       137       147       157       167       177       187       197       207       217       227       237       256       266       276       286       296       306       316       326       336       346       356       366  ||   383       393       403       413       423       433       443       453       463       473       483       493       503       513       523       533       543       553       563||     585       595   ||  612       622       632       642       652       662       672       682       692       702       712       722       732       742       752       762       772       782       792       802       812       822       832     ||860       870       880       890
                                   43|                                                                                                                                                                                246|                                                                                                              369|                                                                                                                                                                                        564|                   599|                                                                                                                                                                                                                                    838|                                 
                                    67                                                                                                                                                                                 256                                                                                                               377                                                                                                                                                                                         577                    607                                                                                                                                                                                                                                     857                                 


Chain D from PDB  Type:PROTEIN  Length:772
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ..........hhhh..hhhhhhhhhh......hhhhhhhhhh........eeee.....hhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhhhhhhhhhhhhhh..eeee........hhhhh.eeeeehhhhhhhhhhhhhh.hhh.eeeeee.hhhhhh.....hhhhhhhhhhhhhhhhh......eeeeee....hhhhhhhhh..eeee.......eeeeeee..eee.....eeee............hhhhhhhhhhhh...eeee..hhhhhhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhh.....hhhhhhhh...eeee....hhhhhhhhhhhhhh....eeeehhhhhh.......eeee...ee..ee.hhhhhhhhhh..........eeeeeee...hhhhhhhhhh..................hhhhhhhhhhhhhh....hhhhhhhhhhhh........hhhhhhhhhhhhhhh..eeee..eeeehhhhhhhhhh..hhhhhhhhhhhhhhhh.......hhhhhhhh..........hhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhh...........hhhhhhhhhhhhhhhhhhh...hhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh.hhhhhhhhhh...hhhhhhhhhh....hhhhhhh.hhhhhhhhhhh...........hhhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a9j D  39 LSPPPGDKLLLANWGLPKAVLEKYHSFGVKKMFEWQAECLLLGQVLEGKNLVYSAPTSAGKTLVAELLILKRVLEMRKKALFILPFVSVAKEKKYYLQSLFQEVGIKVDGYMGSTSPSRHFSSLDIAVCTIERANGLINRLIEENKMDLLGMVVVDELHMLGDSHRGYLLELLLTKICYITRKSASSNAVQIVGMSATLPNLELVASWLNAELYHTDFRPVPLLESVKVGNSIYDSSMKLVREFEPMLQVKGDEDHVVSLCYETICDNHSVLLFCPSKKWCEKLADIIAREFYNLHHQCPPVILEQKELLEVMDQLRRLPSGLDSVLQKTVPWGVAFHHAGLTFEERDIIEGAFRQGLIRVLAATSTLSSGVNLPARRVIIRTPIFGGRPLDILTYKQMVGRAGRKGVDTVGESILICKNSEKSKGIALLQGSLKPVRSCLQRREGEEVTGSMIRAILEIIVGGVASTSQDMHTYAACTFLAASMSVQLGAIEACVMWLLENEFIQSTGKVYHPTHLGSATLSSSLSPADTLDIFADLQRAMKGFVLENDLHILYLVTPMFEDWTTIDWYRFFCLWEKLPTSMKRVAELVGVEEGFLARCVKGKVVARTERQHRQMAIHKRFFTSLVLLDLISEVPLREINQKYGCNRGQIQSLQQSAAVYAGMITVFSNRLGWHNMELLLSQFQKRLTFGIQRELCDLVRVSLLNAQRARVLYASGFHTVADLARANIVEVEVILKNRTIWVTGRKGLTEREAAALIVEEARMILQQDLVE 893
                                 || 70        80        90       100       110       120       130       140       150       160       170       180       190       200       210       220       230       240     ||259       269       279       289       299       309       319       329       339       349       359       378       388       398       408       418       428       438       448       458       468       478       488       498       508       518       528       538       548       558    || 580       590       607       617       627       637       647       657       667       677       687       697       707       717       727       737       747       757       767       777       787       797       807       817       827       861       871       881       891  
                                44|                                                                                                                                                                                246|                                                                                                            367|                                                                                                                                                                                       563|                   598|                                                                                                                                                                                                                                  835|                                 
                                 67                                                                                                                                                                                 256                                                                                                             377                                                                                                                                                                                        576                    606                                                                                                                                                                                                                                   860
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5A9J)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5A9J)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5A9J)

(-) Gene Ontology  (27, 27)

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  DPOLQ_HUMAN | O75417
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 Related Entries

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        DPOLQ_HUMAN | O75417: 4x0p 4x0q 5a9f 5aga

(-) Related Entries Specified in the PDB File

5a9f CRYSTAL STRUCTURE OF THE HELICASE DOMAIN OF HUMAN DNA POLYMERASE THETA IN COMPLEX WITH ADP