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(-) Description

Title :  METHYL-COENZYME M REDUCTASE FROM METHANOTHERMOBACTER MARBURGENSIS AT 1.1 A RESOLUTION
 
Authors :  T. Wagner, U. Ermler
Date :  24 Apr 15  (Deposition) - 11 May 16  (Release) - 29 Mar 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  1.10
Chains :  Asym./Biol. Unit :  A,B,C,D,E,F
Keywords :  Transferase, Post-Translational Modification, Binding Sites, Catalysis, Coenzymes, Disulfides, Hydrogen, Hydrogen Bonding, Ligands, Mesna, Metalloporphyrins, Methane, Methanobacterium, Models, Molecular, Nickel, Oxidation-Reduction, Oxidoreductases, Phosphothreonine, Protein Conformation, Protein Folding, Protein Structure (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  T. Wagner, J. Kahnt, U. Ermler, S. Shima
Didehydroaspartate Modification In Methyl-Coenzyme M Reductase Catalyzing Methane Formation.
Angew. Chem. Int. Ed. Engl. V. 55 10630 2016
PubMed-ID: 27467699  |  Reference-DOI: 10.1002/ANIE.201603882

(-) Compounds

Molecule 1 - METHYL-COENZYME M REDUCTASE I SUBUNIT ALPHA
    Atcc: DSM 2133
    Chains: A, D
    EC Number: 2.8.4.1
    Organism Scientific: METHANOTHERMOBACTER MARBURGENSIS
    Organism Taxid: 145263
    Other Details: IN CHAIN A AND D RESIDUE 257 IS A N1-METHYLHISTIDINE. RESIDUE 271 IS A C5-(S)-METHYLARGININE. RESIDUE 400 IS A C2-(S)- METHYLGLUTAMINE. RESIDUE 445 IS A THIOGLYCINE. RESIDUE 450 IS A DIDEHYDROASPARTATE. RESIDUE 452 IS A S-METHYLCYSTEINE
    Other Details - Source: GERMAN COLLECTION OF MICROORGANISMS (DSM)
    Strain: MARBURG
    Synonym: MCR I ALPHA, COENZYME-B SULFOETHYLTHIOTRANSFERASE ALPHA
 
Molecule 2 - METHYL-COENZYME M REDUCTASE I SUBUNIT BETA
    Atcc: DSM 2133
    Chains: B, E
    EC Number: 2.8.4.1
    Organism Scientific: METHANOTHERMOBACTER MARBURGENSIS
    Organism Taxid: 145263
    Other Details: GERMAN COLLECTION OF MICROORGANISMS (DSM)
    Strain: MARBURG
    Synonym: MCR I BETA, COENZYME-B SULFOETHYLTHIOTRANSFERASE BETA
 
Molecule 3 - METHYL-COENZYME M REDUCTASE I SUBUNIT GAMMA
    Atcc: DSM 2133
    Chains: C, F
    EC Number: 2.8.4.1
    Organism Scientific: METHANOTHERMOBACTER MARBURGENSIS
    Organism Taxid: 145263
    Other Details: GERMAN COLLECTION OF MICROORGANISMS (DSM)
    Strain: MARBURG
    Synonym: MCR I GAMMA, COENZYME-B SULFOETHYLTHIOTRANSFERASE GAMMA

 Structural Features

(-) Chains, Units

  123456
Asymmetric/Biological Unit : ABCDEF

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (13, 39)

Asymmetric/Biological Unit (13, 39)
No.NameCountTypeFull Name
1AGM2Mod. Amino Acid5-METHYL-ARGININE
2CL2Ligand/IonCHLORIDE ION
3COM2Ligand/Ion1-THIOETHANESULFONIC ACID
4DYA2Mod. Amino AcidDIDEHYDROASPARTATE
5F432Ligand/IonFACTOR 430
6GL32Mod. Amino AcidTHIOGLYCIN
7K1Ligand/IonPOTASSIUM ION
8MG16Ligand/IonMAGNESIUM ION
9MGN2Mod. Amino Acid2-METHYL-GLUTAMINE
10MHS2Mod. Amino AcidN1-METHYLATED HISTIDINE
11NA2Ligand/IonSODIUM ION
12SMC2Mod. Amino AcidS-METHYLCYSTEINE
13TP72Ligand/IonCOENZYME B

(-) Sites  (27, 27)

Asymmetric Unit (27, 27)
No.NameEvidenceResiduesDescription
01AC1SOFTWAREHOH A:2281 , HOH A:2285 , HOH A:2670BINDING SITE FOR RESIDUE MG A 551
02AC2SOFTWAREHOH A:2617 , HOH A:2619 , HOH A:2621 , HOH A:2631 , HOH A:2671 , HOH A:2672BINDING SITE FOR RESIDUE MG A 553
03AC3SOFTWAREALA A:144 , VAL A:145 , VAL A:146 , GLN A:147 , GLN A:230 , MET A:233 , ALA A:243 , HOH A:2290 , HOH A:2294 , HOH A:2295 , HOH A:2297 , HOH A:2410 , HOH A:2673 , HOH A:2674 , HOH A:2675 , GLY D:326 , GLY D:327 , VAL D:328 , GLY D:329 , PHE D:330 , THR D:331 , GLN D:332 , TYR D:333 , PHE D:396 , GLY D:397 , GLY D:442 , PHE D:443 , COM D:555 , SER E:365 , ILE E:366 , TYR E:367 , LEU F:117 , SER F:118 , GLY F:119 , LYS F:153 , SER F:154 , VAL F:155 , HIS F:156 , HIS F:158BINDING SITE FOR RESIDUE F43 A 554
04AC4SOFTWARETYR A:333 , PHE A:443 , TYR A:444 , HOH A:2677 , PHE B:361 , SER B:365 , TYR B:367 , LEU C:117 , ARG C:120 , F43 D:552BINDING SITE FOR RESIDUE COM A 555
05AC5SOFTWAREARG A:270 , LEU A:320 , MET A:324 , SER A:325 , PHE A:330 , PHE A:443 , MET A:480 , ASN A:481 , VAL A:482 , HOH A:2449 , HOH A:2456 , HOH A:2601 , HOH A:2678 , HOH A:2680 , HOH A:2681 , PHE B:362 , TYR B:367 , GLY B:369 , HIS B:379 , ILE B:380 , ARG D:225 , LYS D:256 , MHS D:257BINDING SITE FOR RESIDUE TP7 A 557
06AC6SOFTWAREARG A:102 , SER A:215 , ARG A:216 , CYS A:218 , ARG D:102 , SER D:215 , ARG D:216 , CYS D:218BINDING SITE FOR RESIDUE K A 561
07AC7SOFTWAREHOH A:2149 , HOH A:2152 , HOH A:2682 , HOH A:2684 , HOH A:2685 , ASN B:441BINDING SITE FOR RESIDUE MG A 562
08AC8SOFTWARELYS A:11 , PHE A:14 , HOH A:2034 , HOH A:2035 , HOH A:2036 , HOH A:2050BINDING SITE FOR RESIDUE MG A 563
09AC9SOFTWAREPRO A:58 , ILE A:60 , THR A:62 , HOH A:2161 , HOH A:2169 , HOH A:2178BINDING SITE FOR RESIDUE NA A 564
10BC1SOFTWARESER A:237 , HOH A:2403 , LYS F:153BINDING SITE FOR RESIDUE CL A 565
11BC2SOFTWAREHOH B:2400 , HOH B:2401 , HOH B:2550 , HOH B:2551 , HOH B:2552BINDING SITE FOR RESIDUE MG B 444
12BC3SOFTWAREASP B:271 , HOH B:2409 , HOH B:2423 , HOH B:2426 , HOH B:2427 , HOH B:2553BINDING SITE FOR RESIDUE MG B 445
13BC4SOFTWAREGLU C:30 , HOH C:2066 , HOH C:2067 , HOH C:2076 , HOH C:2182 , HOH F:2054BINDING SITE FOR RESIDUE MG C 250
14BC5SOFTWAREHOH C:2256 , HOH C:2264 , HOH C:2285 , HOH C:2286 , HOH C:2287BINDING SITE FOR RESIDUE MG C 251
15BC6SOFTWAREHOH D:2533 , HOH D:2535 , HOH D:2536 , HOH D:2546 , HOH D:2569 , HOH E:2194BINDING SITE FOR RESIDUE MG D 551
16BC7SOFTWAREGLY A:326 , GLY A:327 , VAL A:328 , GLY A:329 , PHE A:330 , THR A:331 , GLN A:332 , TYR A:333 , PHE A:396 , GLY A:397 , GLY A:442 , PHE A:443 , COM A:555 , HOH A:2496 , HOH A:2553 , SER B:365 , ILE B:366 , TYR B:367 , LEU C:117 , SER C:118 , GLY C:119 , ARG C:120 , LYS C:153 , SER C:154 , VAL C:155 , HIS C:156 , HIS C:158 , HOH C:2155 , HOH C:2171 , HOH C:2172 , HOH C:2200 , HOH C:2201 , HOH C:2202 , ALA D:144 , VAL D:145 , VAL D:146 , GLN D:147 , GLN D:230 , MET D:233 , ALA D:243 , HOH D:2270BINDING SITE FOR RESIDUE F43 D 552
17BC8SOFTWAREF43 A:554 , HOH A:2412 , TYR D:333 , PHE D:443 , TYR D:444 , PHE E:361 , SER E:365 , TYR E:367 , LEU F:117 , ARG F:120BINDING SITE FOR RESIDUE COM D 555
18BC9SOFTWAREARG A:225 , LYS A:256 , MHS A:257 , HOH A:2425 , ARG D:270 , LEU D:320 , MET D:324 , SER D:325 , PHE D:330 , PHE D:443 , MET D:480 , ASN D:481 , VAL D:482 , HOH D:2378 , HOH D:2385 , HOH D:2517 , HOH D:2570 , HOH D:2571 , PHE E:362 , TYR E:367 , GLY E:369 , HIS E:379 , ILE E:380BINDING SITE FOR RESIDUE TP7 D 556
19CC1SOFTWARELYS D:11 , PHE D:14 , HOH D:2037 , HOH D:2038 , HOH D:2039 , HOH D:2053BINDING SITE FOR RESIDUE MG D 557
20CC2SOFTWAREHOH A:2288 , HOH A:2291 , PRO D:58 , ILE D:60 , THR D:62 , HOH D:2178BINDING SITE FOR RESIDUE NA D 558
21CC3SOFTWAREASN D:296 , GLU D:298 , ASP D:299 , HOH D:2393 , HOH D:2396 , HOH D:2401BINDING SITE FOR RESIDUE CL D 559
22CC4SOFTWAREGLU D:175 , HOH D:2302BINDING SITE FOR RESIDUE MG D 560
23CC5SOFTWAREHOH E:2360 , HOH E:2361 , HOH E:2438 , HOH E:2439BINDING SITE FOR RESIDUE MG E 444
24CC6SOFTWAREASP E:147 , HOH E:2240 , HOH E:2241 , HOH E:2242 , HOH E:2440BINDING SITE FOR RESIDUE MG E 445
25CC7SOFTWAREHOH E:2255 , HOH E:2283 , HOH E:2441 , HOH E:2442 , HOH E:2443 , HOH E:2444BINDING SITE FOR RESIDUE MG E 446
26CC8SOFTWAREHOH C:2064 , GLU F:30 , HOH F:2055 , HOH F:2056 , HOH F:2067 , HOH F:2156BINDING SITE FOR RESIDUE MG F 250
27CC9SOFTWAREHOH F:2248 , HOH F:2249 , HOH F:2250 , HOH F:2251 , HOH F:2253 , HOH F:2254BINDING SITE FOR RESIDUE MG F 251

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5A0Y)

(-) Cis Peptide Bonds  (2, 2)

Asymmetric/Biological Unit
No.Residues
1Tyr B:164 -Pro B:165
2Tyr E:164 -Pro E:165

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5A0Y)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5A0Y)

(-) Exons   (0, 0)

(no "Exon" information available for 5A0Y)

(-) Sequences/Alignments

Asymmetric/Biological Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:549
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     
               SCOP domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhh.......ee.....hhhhhhhhhhhhhhhhhhhhhhhh..................eee......eee.hhhhhhhhhhhhhhhhhhhheeeeehhhhhhhhhhh.....hhhhhhhhhhhhhhhh.............hhhhhh..eeeeee.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhh..hhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhh..ee......hhhhh....hhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhh....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhh........hhhhh...hhhhh....hhhhhhhhhhhhhhhhh.....hhhhhhhh..........hhhhhhhhhhh........hhhhh... Sec.struct. author
                 SAPs(SNPs) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y A   2 ADKLFINALKKKFEESPEEKKTTFYTLGGWKQSERKTEFVNAGKEVAAKRGIPQYNPDIGTPLGQRVLMPYQVSTTDTYVEGDDLHFVNNAAMQQMWDDIRRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVETHPALVADSYVKVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIPTIVSRTCDGATTSRWSAMQIGMSMISAYKQAAGEAATGDFAYAAKhAEVIHMGTYLPVRrARGENEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLYDQIWLGSYMSGGVGFTQYATAAYTDNILDDFTYFGKEYVEDKYGLCEAPNNMDTVLDVATEVTFYGLEQYEEYPALLEDQFGGSqRAAVVAAAAGCSTAFATGNAQTGLSGWYLSMYLHKEQHSRLGFYgYDLQdQcGASNVFSIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDNLVFDFTNVRGEFAKGALREFEPAGERALITPAK 550
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251     | 261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441   |   451|      461       471       481       491       501       511       521       531       541         
                                                                                                                                                                                                                                                                                         257-MHS       271-AGM                                                                                                                          400-MGN                                      445-GL3| |                                                                                                  
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          450-DYA                                                                                                
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            452-SMC                                                                                              


Chain B from PDB  Type:PROTEIN  Length:442
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee.....eeeeeee.hhhh...hhhhhhhhhhhhheeeeehhhhhhhhhhh.................hhhhhhhhhhhhhhhhh.......eeeeehhh.eeeee.hhhhhhh....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh............ee....hhhhh....hhhhh.hhhhhhhhh..hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeee..eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh........hhhhh.............hhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y B   2 AKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRTVAVNLEGIENALKTAKVGGPACKIMGRELDLDIVGNAESIAAAAKEMIQVTEDDDTNVELLGGGKRALVQVPSARFDVAAEYSAAPLVTATAFVQAIINEFDVSMYDANMVKAAVLGRYPQSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVVAATLKNTLQAAALSTILEQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFDLVKANGKEGTVGSVIADLVERALEDGVIKVEKELTDYKVYGTDDLAMWNAYAAAGLMAATMVNQGAARAAQGVSSTLLYYNDLIEFETGLPSVDFGKVEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPCVAAAMALDAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI 443
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441  


Chain C from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh...........hhhhhhhhhh.............hhhhh....hhhhhhh..hhhhhhh..eeeeeeee.......hhhhhhhhhhhhh...eeee....eeeeeehhhhhhhhhhhhhh.......eee...........ee...........eee......eeeee.....eeeeeee.....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y C   2 AQYYPGTTKVAQNRRNFCNPEYELEKLREISDEDVVKILGHRAPGEEYPSVHPPLEEMDEPEDAIREMVEPIDGAKAGDRVRYIQFTDSMYFAPAQPYVRSRAYLCRYRGADAGTLSGRQIIETRERDLEKISKELLETEFFDPARSGVRGKSVHGHSLRLDEDGMMFDMLRRQIYNKDTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVEAVEIMQRIHVLRSQGGFNLE 249
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241        


Chain D from PDB  Type:PROTEIN  Length:548
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhh..............hhhhhhhhhhhhhhhhhhhhhhhh..................eee......eee.hhhhhhhhhhhhhhhhhhhheeeeehhhhhhhhhhh.....hhhhhhhhhhhhhhhh.............hhhhhh..eeeeee.hhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhh..eeeeee.hhhhhhhh..hhhhhhhhhhhhhhhhhhh.......hhhhhhhhhhh..ee......hhhhh....hhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhh....hhhhhhhhhhhhhhhhhh.......hhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh............hhhhhhh........hhhhh...hhhhh....hhhhhhhhhhhhhhhhh.....hhhhhhhh..........hhhhhhhhhhh........hhhhh.. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y D   2 ADKLFINALKKKFEESPEEKKTTFYTLGGWKQSERKTEFVNAGKEVAAKRGIPQYNPDIGTPLGQRVLMPYQVSTTDTYVEGDDLHFVNNAAMQQMWDDIRRTVIVGLNHAHAVIEKRLGKEVTPETITHYLETVNHAMPGAAVVQEHMVETHPALVADSYVKVFTGNDEIADEIDPAFVIDINKQFPEDQAETLKAEVGDGIWQVVRIPTIVSRTCDGATTSRWSAMQIGMSMISAYKQAAGEAATGDFAYAAKhAEVIHMGTYLPVRrARGENEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLYDQIWLGSYMSGGVGFTQYATAAYTDNILDDFTYFGKEYVEDKYGLCEAPNNMDTVLDVATEVTFYGLEQYEEYPALLEDQFGGSqRAAVVAAAAGCSTAFATGNAQTGLSGWYLSMYLHKEQHSRLGFYgYDLQdQcGASNVFSIRGDEGLPLELRGPNYPNYAMNVGHQGEYAGISQAPHAARGDAFVFNPLVKIAFADDNLVFDFTNVRGEFAKGALREFEPAGERALITPA 549
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251     | 261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441   |   451|      461       471       481       491       501       511       521       531       541        
                                                                                                                                                                                                                                                                                         257-MHS       271-AGM                                                                                                                          400-MGN                                      445-GL3| |                                                                                                 
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          450-DYA                                                                                               
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            452-SMC                                                                                             


Chain E from PDB  Type:PROTEIN  Length:442
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
               SCOP domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .....eeeee.....eeeeeee.hhhh...hhhhhhhhhhhhheeeeehhhhhhhhhhh.................hhhhhhhhhhhhhhhhh.......eeeeehhh.eeeee.hhhhhhh....hhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhh............ee....hhhhh....hhhhh.hhhhhhhhh..hhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhh...eeeeee..eeeee..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhh........hhhhh.............hhhhhhhhhhh.......hhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y E   2 AKFEDKVDLYDDRGNLVEEQVPLEALSPLRNPAIKSIVQGIKRTVAVNLEGIENALKTAKVGGPACKIMGRELDLDIVGNAESIAAAAKEMIQVTEDDDTNVELLGGGKRALVQVPSARFDVAAEYSAAPLVTATAFVQAIINEFDVSMYDANMVKAAVLGRYPQSVEYMGANIATMLDIPQKLEGPGYALRNIMVNHVVAATLKNTLQAAALSTILEQTAMFEMGDAVGAFERMHLLGLAYQGMNADNLVFDLVKANGKEGTVGSVIADLVERALEDGVIKVEKELTDYKVYGTDDLAMWNAYAAAGLMAATMVNQGAARAAQGVSSTLLYYNDLIEFETGLPSVDFGKVEGTAVGFSFFSHSIYGGGGPGIFNGNHIVTRHSKGFAIPCVAAAMALDAGTQMFSPEATSGLIKEVFSQVDEFREPLKYVVEAAAEIKNEI 443
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241       251       261       271       281       291       301       311       321       331       341       351       361       371       381       391       401       411       421       431       441  


Chain F from PDB  Type:PROTEIN  Length:248
                                                                                                                                                                                                                                                                                        
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author .......hhhhhhhhhhhh...........hhhhhhhhhh.............hhhhh....hhhhhhh..hhhhhhh..eeeeeeee.......hhhhhhhhhhhhh...eeee....eeeeeehhhhhhhhhhhhhh.......eee........................eeee....eeeeee.....eeeeeee.....hhhhhhhhh........hhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5a0y F   2 AQYYPGTTKVAQNRRNFCNPEYELEKLREISDEDVVKILGHRAPGEEYPSVHPPLEEMDEPEDAIREMVEPIDGAKAGDRVRYIQFTDSMYFAPAQPYVRSRAYLCRYRGADAGTLSGRQIIETRERDLEKISKELLETEFFDPARSGVRGKSVHGHSLRLDEDGMMFDMLRRQIYNKDTGRVEMVKNQIGDELDEPVDLGEPLDEETLMEKTTIYRVDGEAYRDDVEAVEIMQRIHVLRSQGGFNLE 249
                                    11        21        31        41        51        61        71        81        91       101       111       121       131       141       151       161       171       181       191       201       211       221       231       241
   Legend:   → Mismatch (orange background)
  - → Gap (green background, '-', border residues have a numbering label)
    → Modified Residue (blue background, lower-case, 'x' indicates undefined single-letter code, labelled with number + name)
  x → Chemical Group (purple background, 'x', labelled with number + name, e.g. ACE or NH2)
  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5A0Y)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5A0Y)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5A0Y)

(-) Gene Ontology  (4, 10)

Asymmetric/Biological Unit(hide GO term definitions)

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Asymmetric/Biological Unit
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  5a0y
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  MCRA_METTM | P11558
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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        MCRA_METTM | P11558: 1hbm 1hbn 1hbo 1hbu 1mro 3m1v 3m2r 3m2u 3m2v 3m30 3m32 3pot 5g0r
        MCRB_METTM | P11560: 1hbm 1hbn 1hbo 1hbu 1mro 3m1v 3m2r 3m2u 3m2v 3m30 3m32 3pot 5g0r
        MCRG_METTM | P11562: 1hbm 1hbn 1hbo 1hbu 1mro 3m1v 3m2r 3m2u 3m2v 3m30 3m32 3pot 5g0r

(-) Related Entries Specified in the PDB File

(no "Related Entries Specified in the PDB File" available for 5A0Y)