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(-) Description

Title :  STRUCTURE OF COFOLDED FLIFC:FLIGN COMPLEX FROM THERMOTOGA MARITIMA
 
Authors :  M. J. Lynch, R. Levenson, E. A. Kim, R. Sircar, D. F. Blair, F. W. Dahlquis B. R. Crane
Date :  20 Sep 16  (Deposition) - 25 Jan 17  (Release) - 22 Feb 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  2.11
Chains :  Asym. Unit :  A,B,C,D
Biol. Unit 1:  A,B  (1x)
Biol. Unit 2:  C,D  (1x)
Biol. Unit 3:  A (1x),B (1x),C (1x),D (1x)
Biol. Unit 4:  A (1x),B (1x),C (1x),D (1x)
Keywords :  Flagellar Motor, Switch Complex, Motor Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  M. J. Lynch, R. Levenson, E. A. Kim, R. Sircar, D. F. Blair, F. W. Dahlquist, B. R. Crane
Co-Folding Of A Flif-Flig Split Domain Forms The Basis Of The Ms:C Ring Interface Within The Bacterial Flagellar Motor.
Structure V. 25 317 2017
PubMed-ID: 28089452  |  Reference-DOI: 10.1016/J.STR.2016.12.006

(-) Compounds

Molecule 1 - FLAGELLAR M-RING PROTEIN
    Chains: A, C
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Plasmid: PJY5
    Expression System Strain: B834
    Expression System Taxid: 562
    Fragment: FLIF C-TERMINAL TAIL
    Gene: TM_0221, TMARI_0219
    Organism Scientific: THERMOTOGA MARITIMA
    Organism Taxid: 243274
    Other Details: CONTAINS C-TERMINAL LINKER SEQUENCE -LENLYF-
    Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099
 
Molecule 2 - FLAGELLAR MOTOR SWITCH PROTEIN FLIG
    Chains: B, D
    Engineered: YES
    Expression System: ESCHERICHIA COLI
    Expression System Cell Line: B834
    Expression System Strain: B834
    Expression System Taxid: 562
    Gene: FLIG, TM_0220
    Organism Scientific: THERMOTOGA MARITIMA (STRAIN ATCC 43589 / MSB8 / DSM 3109 / JCM 10099)
    Organism Taxid: 243274
    Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099

 Structural Features

(-) Chains, Units

  1234
Asymmetric Unit : ABCD
Biological Unit 1 (1x): AB  
Biological Unit 2 (1x):   CD
Biological Unit 3 (1x): A (1x)B (1x)C (1x)D (1x)
Biological Unit 4 (1x): A (1x)B (1x)C (1x)D (1x)

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (1, 5)

Asymmetric Unit (1, 5)
No.NameCountTypeFull Name
1MSE5Mod. Amino AcidSELENOMETHIONINE
Biological Unit 1 (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 2 (1, 2)
No.NameCountTypeFull Name
1MSE2Mod. Amino AcidSELENOMETHIONINE
Biological Unit 3 (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE
Biological Unit 4 (1, 3)
No.NameCountTypeFull Name
1MSE3Mod. Amino AcidSELENOMETHIONINE

(-) Sites  (0, 0)

(no "Site" information available for 5TDY)

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5TDY)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5TDY)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5TDY)

(-) PROSITE Motifs  (0, 0)

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(-) Exons   (0, 0)

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(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
  Number of residues per labelling interval =   
  UniProt sequence: complete  aligned part    
   Show mapping: SCOP domains CATH domains Pfam domains Secondary structure (by author)
SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:35
                                                                  
               SCOP domains ----------------------------------- SCOP domains
               CATH domains ----------------------------------- CATH domains
               Pfam domains ----------------------------------- Pfam domains
         Sec.struct. author hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) ----------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------- PROSITE
                 Transcript ----------------------------------- Transcript
                  5tdy A  3 mPEEKELLELLEELENIFSRSPSDIAEIVRLWFFE 37
                            |       12        22        32     
                            |                                  
                            3-MSE                              


Chain B from PDB  Type:PROTEIN  Length:95
                                                                                                                              
               SCOP domains ----------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ----------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ----------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ...hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhh......hhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ----------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ----------------------------------------------------------------------------------------------- PROSITE
                 Transcript ----------------------------------------------------------------------------------------------- Transcript
                  5tdy B  4 KKIDGRRKAAVLLVALGPEKAAQVmKHLDEETVEQLVVEIANIGRVTPEEKKQVLEEFLSLAKAKEmISEGGIEYAKKVLEKAFGPERARKIIER 98
                                    13        23    |   33        43        53        63      | 73        83        93     
                                                   28-MSE                                    70-MSE                        


Chain C from PDB  Type:PROTEIN  Length:42
                                                                         
               SCOP domains ------------------------------------------ SCOP domains
               CATH domains ------------------------------------------ CATH domains
               Pfam domains ------------------------------------------ Pfam domains
         Sec.struct. author .hhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhh..hhhhhhh Sec.struct. author
                 SAPs(SNPs) ------------------------------------------ SAPs(SNPs)
                    PROSITE ------------------------------------------ PROSITE
                 Transcript ------------------------------------------ Transcript
                  5tdy C  4 PEEKELLELLEELENIFSRSPSDIAEIVRLWFFERGLENLYF 45
                                    13        23        33        43  


Chain D from PDB  Type:PROTEIN  Length:88
                                                                                                                       
               SCOP domains ---------------------------------------------------------------------------------------- SCOP domains
               CATH domains ---------------------------------------------------------------------------------------- CATH domains
               Pfam domains ---------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ---------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ---------------------------------------------------------------------------------------- PROSITE
                 Transcript ---------------------------------------------------------------------------------------- Transcript
                  5tdy D  3 EKKIDGRRKAAVLLVALGPEKAAQVmKHLDEETVEQLVVEIANIGRVTPEEKKQVLEEFLSLAKAKEmISEGGIEYAKKVLEKAFGPE 90
                                    12        22     |  32        42        52        62       |72        82        
                                                    28-MSE                                    70-MSE
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5TDY)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5TDY)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5TDY)

(-) Gene Ontology  (13, 18)

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 Related Entries

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        FLIG_THEMA | Q9WY63: 1lkv 1qc7 3ajc 3soh 4fhr 4qrm

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