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Title :   HALOFERAX VOLCANII MALATE SYNTHASE LEAD(II) COMPLEX

Authors :   B. R. Howard, M. J. Adams

Date :   10 Sep 16 (Deposition) - 09 Nov 16 (Release) - 21 Dec 16 (Revision)

Method :   X-RAY DIFFRACTION

Resolution :   2.10

Chains :   Asym. Unit : A
Biol. Unit 1: A  (6x)
Biol. Unit 2: A  (3x)

Keywords :   Transferase (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )

Reference :   B. R. Howard, M. J. Adams
X-Ray Analysis Of Lead(Ii) Binding To Haloferax Volcanii Malate Synthase
To Be Published
PubMed: search
(for further references see the PDB file header)

Molecule 1 - MALATE SYNTHASE
	Chains	:	A
	EC Number	:	2.3.3.9
	Engineered	:	YES
	Expression System	:	HALOFERAX VOLCANII
	Expression System Taxid	:	2246
	Gene	:	ACEB, ACEB1, HVO_1983, C498_05196
	Organism Scientific	:	HALOFERAX VOLCANII (STRAIN ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2)
	Organism Taxid	:	309800
	Strain	:	ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2
	Synonym	:	MSH

		1
Asymmetric Unit	:	A
Biological Unit 1 (6x)	:	A
Biological Unit 2 (3x)	:	A

Summary Information (see also Sequences/Alignments below)

Asymmetric Unit (6, 16)

No.	Name	Count	Type	Full Name
1	ACT	1	Ligand/Ion	ACETATE ION
2	CL	4	Ligand/Ion	CHLORIDE ION
3	GLV	3	Ligand/Ion	GLYOXYLIC ACID
4	K	3	Ligand/Ion	POTASSIUM ION
5	NA	1	Ligand/Ion	SODIUM ION
6	PB	4	Ligand/Ion	LEAD (II) ION

Biological Unit 1 (2, 24)

No.	Name	Count	Type	Full Name
1	ACT	6	Ligand/Ion	ACETATE ION
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GLV	18	Ligand/Ion	GLYOXYLIC ACID
4	K	-1	Ligand/Ion	POTASSIUM ION
5	NA	-1	Ligand/Ion	SODIUM ION
6	PB	-1	Ligand/Ion	LEAD (II) ION

Biological Unit 2 (2, 12)

No.	Name	Count	Type	Full Name
1	ACT	3	Ligand/Ion	ACETATE ION
2	CL	-1	Ligand/Ion	CHLORIDE ION
3	GLV	9	Ligand/Ion	GLYOXYLIC ACID
4	K	-1	Ligand/Ion	POTASSIUM ION
5	NA	-1	Ligand/Ion	SODIUM ION
6	PB	-1	Ligand/Ion	LEAD (II) ION

Asymmetric Unit (16, 16)

No.	Name	Evidence	Residues	Description
01	AC1	SOFTWARE	GLY A:174 , LYS A:175 , ASN A:178 , GLU A:181 , K A:509 , K A:511	binding site for residue ACT A 501
02	AC2	SOFTWARE	ASP A:52 , ARG A:84 , GLU A:158 , GLY A:189 , VAL A:191 , ASP A:192 , PB A:506	binding site for residue GLV A 502
03	AC3	SOFTWARE	ARG A:89 , ASP A:90 , GLU A:161 , ASP A:196 , PB A:505 , PB A:507 , HOH A:648 , HOH A:740	binding site for residue GLV A 503
04	AC4	SOFTWARE	GLU A:51 , ASP A:52 , GLU A:123 , ASP A:192 , PB A:506 , HOH A:665 , HOH A:792	binding site for residue GLV A 504
05	AC5	SOFTWARE	GLU A:161 , ASP A:196 , SER A:221 , GLV A:503 , HOH A:779	binding site for residue PB A 505
06	AC6	SOFTWARE	GLU A:51 , ASP A:52 , GLU A:123 , GLU A:158 , ASP A:192 , GLV A:502 , GLV A:504	binding site for residue PB A 506
07	AC7	SOFTWARE	ASP A:90 , GLU A:161 , GLV A:503	binding site for residue PB A 507
08	AC8	SOFTWARE	ASP A:344 , ASP A:348 , ARG A:427 , HOH A:752	binding site for residue PB A 508
09	AC9	SOFTWARE	MET A:173 , LYS A:175 , ASN A:178 , GLU A:181 , ACT A:501	binding site for residue K A 509
10	AD1	SOFTWARE	MET A:197 , SER A:217 , SER A:221 , GLY A:252 , CL A:514 , HOH A:601	binding site for residue K A 510
11	AD2	SOFTWARE	PRO A:176 , ASN A:178 , ASN A:179 , ACT A:501	binding site for residue K A 511
12	AD3	SOFTWARE	ARG A:89 , ARG A:95 , HOH A:790 , HOH A:813	binding site for residue CL A 512
13	AD4	SOFTWARE	ARG A:218	binding site for residue CL A 513
14	AD5	SOFTWARE	ARG A:198 , ALA A:227 , GLY A:252 , K A:510	binding site for residue CL A 514
15	AD6	SOFTWARE	GLY A:125 , GLY A:126 , ARG A:170 , THR A:177 , HOH A:798	binding site for residue CL A 515
16	AD7	SOFTWARE	PRO A:78 , ASN A:408 , HOH A:820	binding site for residue NA A 516

(no "SS Bond" information available for 5TAO)

(no "Cis Peptide Bond" information available for 5TAO)

(no "SAP(SNP)/Variant" information available for 5TAO)

(no "PROSITE Motif" information available for 5TAO)

(no "Exon" information available for 5TAO)

Asymmetric Unit

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Chain A from PDB  Type:PROTEIN  Length:356
                                                                                                                                                                                                                                                                                                                                                                                                    
               SCOP domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ........eeeeee.......hhhhhhhhhhhhhhh..eeeee.....hhhhhhhhhhhhhhhhhhhhhhh..ee.........hhhhhhhhhhhhhhhhhhhhhhhhhh.eeee....hhhhhhhhhhhhhhhhhhh.......eeeeee.hhhhhhhhhhhhhhh.....hhh.eeeeeehhhhhhhhhh..........hhhhhhhhhhhhhhhh.eeee.......hhhhhhhhhhhhhh....eeee.hhhhhhhhhhh................hhhhhhhhhh....hhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhh. Sec.struct. author
                 SAPs(SNPs) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5tao A   5 RHDREFVRTFFTSPTAVEDDSAKMLRRAAGLRGMQAPDVWVPDNEDATAPSMRDEGAENIVEVISEQGAEFPGEIHPRMVWHRDSPETRYQGFQHMLDITDPERGAVEHIHGFVIPEVGGIDDWKKADEFFTIVEHEHGLDEGSLAMSVIIESGEAELAMGDLRDEMGKPTNNLERLFLLVDGEVDYTKDMRAMTPTGELPAWPELRHNTSRGASAAGCVAVDGPYDDIRDVEGYRERMTDNQAKGMLGIWSLTPGQVVEANTSPLPPKTGSWLLDLTADELREELLGLTSYVPSMDDIVDSMEEFEAAKWDEATYQAAMTPISLFQDVYENRPDQHEELEERYGAGVVERAMEVG 432
                                    14       |26        36        46        56        66        76        86        96       106       116       126       136       146       156       166       176       186       196       206       216       226       236       246       256       266       276     ||327       337       347       357|      396       406       416       426      
                                            22|                                                                                                                                                                                                                                                              282|                              357|                                             
                                             25                                                                                                                                                                                                                                                               324                               387

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	extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '\|'

(no "SCOP Domain" information available for 5TAO)

(no "CATH Domain" information available for 5TAO)

(no "Pfam Domain" information available for 5TAO)

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Description

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Ligands, Modified Residues, Ions (6, 16)

Sites (16, 16)

SS Bonds (0, 0)

Cis Peptide Bonds (0, 0)

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