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(-) Description

Title :  STRUCTURE OF THE THERMOSTABILIZED EAAT1 CRYST MUTANT IN COMPLEX WITH THE COMPETITITVE INHIBITOR TFB-TBOA AND THE ALLOSTERIC INHIBITOR UCPH101
 
Authors :  J. Canul-Tec, R. Assal, P. Legrand, N. Reyes
Date :  01 Dec 16  (Deposition) - 19 Apr 17  (Release) - 10 May 17  (Revision)
Method :  X-RAY DIFFRACTION
Resolution :  3.71
Chains :  Asym. Unit :  A
Biol. Unit 1:  A  (3x)
Keywords :  Excitatory Aminoacid Transporter 1, Human Glutamate Transporter, Tfb- Tboa, Ucph-101, Transport Protein (Keyword Search: [Gene Ontology, PubMed, Web (Google)] )
 
Reference :  J. C. Canul-Tec, R. Assal, E. Cirri, P. Legrand, S. Brier, J. Chamot-Rooke, N. Reyes
Structure And Allosteric Inhibition Of Excitatory Amino Aci Transporter 1.
Nature V. 544 446 2017
PubMed-ID: 28424515  |  Reference-DOI: 10.1038/NATURE22064

(-) Compounds

Molecule 1 - EXCITATORY AMINO ACID TRANSPORTER 1,NEUTRAL AMINO ACID TRANSPORTER B(0),EXCITATORY AMINO ACID TRANSPORTER 1
    Chains: A
    Engineered: YES
    Expression System: HOMO SAPIENS
    Expression System Atcc Number: CRL-1573-2
    Expression System Cell: EPITHELIAL
    Expression System Cell Line: HEK-293F
    Expression System Common: HUMAN
    Expression System Organ: KIDNEY
    Expression System Plasmid: PCDNA3
    Expression System Taxid: 9606
    Expression System Tissue: EMBRYONIC KIDNEY
    Expression System Vector Type: MAMMALIAN EXPRESSION
    Gene: SLC1A3, EAAT1, GLAST, GLAST1, SLC1A5, ASCT2, M7V1, RDR, RDRC
    Organism Common: HUMAN
    Organism Scientific: HOMO SAPIENS
    Organism Taxid: 9606
    Synonym: SODIUM-DEPENDENT GLUTAMATE/ASPARTATE TRANSPORTER 1,GLAST-1, SOLUTE CARRIER FAMILY 1 MEMBER 3,ATB(0),BABOON M7 VIRUS RECEPTOR, RD114/SIMIAN TYPE D RETROVIRUS RECEPTOR,SODIUM-DEPENDENT NEUTRAL AMINO ACID TRANSPORTER TYPE 2,SOLUTE CARRIER FAMILY 1 MEMBER 5, SODIUM-DEPENDENT GLUTAMATE/ASPARTATE TRANSPORTER 1,GLAST-1,SOLUTE CARRIER FAMILY 1 MEMBER 3

 Structural Features

(-) Chains, Units

  1
Asymmetric Unit : A
Biological Unit 1 (3x): A

Summary Information (see also Sequences/Alignments below)

(-) Ligands, Modified Residues, Ions  (2, 2)

Asymmetric Unit (2, 2)
No.NameCountTypeFull Name
16Z61Ligand/Ion2-AMINO-5,6,7,8-TETRAHYDRO-4-(4-METHOXYPHENYL)-7-(NAPHTHALEN-1-YL)-5-OXO-4H-CHROMENE-3-CARBONITRILE
27O91Ligand/Ion(2~{S},3~{S})-2-AZANYL-3-[[3-[[4-(TRIFLUOROMETHYL)PHENYL]CARBONYLAMINO]PHENYL]METHOXY]BUTANEDIOIC ACID
Biological Unit 1 (2, 6)
No.NameCountTypeFull Name
16Z63Ligand/Ion2-AMINO-5,6,7,8-TETRAHYDRO-4-(4-METHOXYPHENYL)-7-(NAPHTHALEN-1-YL)-5-OXO-4H-CHROMENE-3-CARBONITRILE
27O93Ligand/Ion(2~{S},3~{S})-2-AZANYL-3-[[3-[[4-(TRIFLUOROMETHYL)PHENYL]CARBONYLAMINO]PHENYL]METHOXY]BUTANEDIOIC ACID

(-) Sites  (2, 2)

Asymmetric Unit (2, 2)
No.NameEvidenceResiduesDescription
1AC1SOFTWARESER A:116 , GLY A:117 , VAL A:124 , TYR A:127 , MET A:231 , PHE A:235 , PHE A:369 , VAL A:373binding site for residue 6Z6 A 601
2AC2SOFTWAREILE A:96 , ILE A:100 , ILE A:223 , SER A:343 , SER A:344 , SER A:345 , SER A:346 , LEU A:349 , PRO A:372 , ALA A:375 , THR A:376 , MET A:379 , THR A:382 , GLY A:419 , ALA A:420 , GLN A:425 , ALA A:426 , GLY A:427 , ASP A:456 , ARG A:459 , THR A:460 , ASN A:463binding site for residue 7O9 A 602

(-) SS Bonds  (0, 0)

(no "SS Bond" information available for 5MJU)

(-) Cis Peptide Bonds  (0, 0)

(no "Cis Peptide Bond" information available for 5MJU)

 Sequence-Structure Mapping

(-) SAPs(SNPs)/Variants  (0, 0)

(no "SAP(SNP)/Variant" information available for 5MJU)

(-) PROSITE Motifs  (0, 0)

(no "PROSITE Motif" information available for 5MJU)

(-) Exons   (0, 0)

(no "Exon" information available for 5MJU)

(-) Sequences/Alignments

Asymmetric Unit
   Reformat: Number of residues per line =  ('0' or empty: single-line sequence representation)
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SAPs(SNPs) PROSITE motifs Exons
(details for a mapped element are shown in a popup box when the mouse pointer rests over it) 
Chain A from PDB  Type:PROTEIN  Length:397
                                                                                                                                                                                                                                                                                                                                                                                                                                             
               SCOP domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SCOP domains
               CATH domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- CATH domains
               Pfam domains ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Pfam domains
         Sec.struct. author ....hhhhhhhhhhhhhhhhhhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhh..hhhhhh.eee.....eee..hhhhhhhhhhhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhh.hhhhhhhhhhhh.....hhhhhhhhhhhhhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh....hhhhhhhhhhhhhhh.hhhhhhhhhhhhhhhhhh..hhhhhhhhhhhhhh..........hhhhhhhh...hhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhhh.. Sec.struct. author
                 SAPs(SNPs) ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- SAPs(SNPs)
                    PROSITE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- PROSITE
                 Transcript ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Transcript
                 5mju A  37 TKEDVKSFLRRNALLLLTVLAVILGVVLGFLLRPYPLSPREVKYFAFPGELLMRMLKMLILPLIVSSLITGLASLDAKASGRLGMRAVVYYMSTTIIAVVLGIILVLIIHEVLDCFLDLARNIFPSNLVSAAFRSYSTTGQEVEGMNILGLVVFSMVFGFALGKMGEQGQLLVDFFNSLNEATMKLVAIIMWYAPLGILFLIAGKIVEGQLGMYMVTVIVGLVIHGLIVLPLIYFLITRKNPFVFIAGILQALITALGTSSSSATLPITFKCLEENNGVDKRITRFVLPVGATINMDGTALYEAVAAIFIAQVNQIITISITATAASIGAAGIPQAGLVTMVIVLTAVGLPTDDITLIIAVDWLLDRFRTMVNVLGDALGAGIVEHLSRKELEKQDA 487
                                    46        56        66        76        86        96       106       116       126       136       146|      180       190       215       225       235       245       255       265       275       293       303       313       323       333       343       353       363       373       383       393   ||  410       420       430       440       450       460       470       480       
                                                                                                                                       146|                         199|                                                                 283|                                                                                                      397|                                                                                  
                                                                                                                                        171                          215                                                                  292                                                                                                       405
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  extra numbering lines below/above indicate numbering irregularities and modified residue names etc., number ends below/above '|'

 Classification and Annotation

(-) SCOP Domains  (0, 0)

(no "SCOP Domain" information available for 5MJU)

(-) CATH Domains  (0, 0)

(no "CATH Domain" information available for 5MJU)

(-) Pfam Domains  (0, 0)

(no "Pfam Domain" information available for 5MJU)

(-) Gene Ontology  (59, 67)

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 Related Entries

(-) Entries Sharing at Least One Protein Chain (UniProt ID)

UniProtKB/Swiss-Prot
        AAAT_HUMAN | Q15758: 5llm 5llu 5lm4
        EAA1_HUMAN | P43003: 5llm 5llu 5lm4

(-) Related Entries Specified in the PDB File

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